RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 PHACTR1Q9C0D0 580 aa9.41□□□□□ -0.9
CASP4-212ENST00000533730 CRISPLD1Q9H336 500 aa9.41□□□□□ -0.9
CASP4-212ENST00000533730 SRA1Q9HD15 236 aaKnown RBP9.41□□□□□ -0.9
CASP4-212ENST00000533730 TLDC2A0PJX2 215 aa9.4□□□□□ -0.9
CASP4-212ENST00000533730 IQCA1LA6NCM1 817 aa9.4□□□□□ -0.9
CASP4-212ENST00000533730 ECE2O60344 883 aa9.4□□□□□ -0.9
CASP4-212ENST00000533730 PCSK2P16519 638 aa9.4□□□□□ -0.9
CASP4-212ENST00000533730 IL15P40933 162 aaPredicted RBP9.4□□□□□ -0.9
CASP4-212ENST00000533730 ATP8B2P98198 1209 aa9.4□□□□□ -0.9
CASP4-212ENST00000533730 CIAPIN1Q6FI81 312 aa9.4□□□□□ -0.9
CASP4-212ENST00000533730 ZNF804AQ7Z570 1209 aa9.4□□□□□ -0.9
CASP4-212ENST00000533730 PODNQ7Z5L7 613 aa9.4□□□□□ -0.9
CASP4-212ENST00000533730 TREML1Q86YW5 311 aa9.4□□□□□ -0.9
CASP4-212ENST00000533730 TRIM22Q8IYM9 498 aa9.4□□□□□ -0.9
CASP4-212ENST00000533730 AIDAQ96BJ3 306 aa9.4□□□□□ -0.9
CASP4-212ENST00000533730 PUS3Q9BZE2 481 aaKnown RBP9.4□□□□□ -0.9
CASP4-212ENST00000533730 COA1Q9GZY4 146 aa9.4□□□□□ -0.9
CASP4-212ENST00000533730 GPAMQ9HCL2 828 aa9.4□□□□□ -0.9
CASP4-212ENST00000533730 ZBTB40Q9NUA8 1239 aa9.4□□□□□ -0.9
CASP4-212ENST00000533730 ZNF541Q9H0D2 1346 aa9.39□□□□□ -0.91
CASP4-212ENST00000533730 HMMRO75330 724 aa9.39□□□□□ -0.91
CASP4-212ENST00000533730 TAF5LO75529 589 aa9.39□□□□□ -0.91
CASP4-212ENST00000533730 PDE8BO95263 885 aa9.39□□□□□ -0.91
CASP4-212ENST00000533730 IFIT1P09914 478 aaKnown RBP9.39□□□□□ -0.91
CASP4-212ENST00000533730 VEGFAP15692 232 aaPredicted RBP9.39□□□□□ -0.91
CASP4-212ENST00000533730 RBL2Q08999 1139 aa9.39□□□□□ -0.91
CASP4-212ENST00000533730 UBAP2LQ14157 1087 aaKnown RBP9.39□□□□□ -0.91
CASP4-212ENST00000533730 PUM3Q15397 648 aaKnown RBP9.39□□□□□ -0.91
CASP4-212ENST00000533730 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.39□□□□□ -0.91
CASP4-212ENST00000533730 LRRC24Q50LG9 513 aa9.39□□□□□ -0.91
CASP4-212ENST00000533730 HS2ST1Q7LGA3 356 aa9.39□□□□□ -0.91
CASP4-212ENST00000533730 MCF2L2Q86YR7 1114 aa9.39□□□□□ -0.91
CASP4-212ENST00000533730 RPAP2Q8IXW5 612 aaPredicted RBP9.39□□□□□ -0.91
CASP4-212ENST00000533730 KLHDC4Q8TBB5 520 aa9.39□□□□□ -0.91
CASP4-212ENST00000533730 SSH3Q8TE77 659 aa9.39□□□□□ -0.91
CASP4-212ENST00000533730 ZNF526Q8TF50 670 aaPredicted RBP9.39□□□□□ -0.91
CASP4-212ENST00000533730 GMCL1Q96IK5 515 aa9.39□□□□□ -0.91
CASP4-212ENST00000533730 DNAJC25Q9H1X3 360 aa9.39□□□□□ -0.91
CASP4-212ENST00000533730 ZSWIM4Q9H7M6 989 aa9.39□□□□□ -0.91
CASP4-212ENST00000533730 GGT7Q9UJ14 662 aa9.39□□□□□ -0.91
CASP4-212ENST00000533730 COL4A5P29400 1685 aa9.39□□□□□ -0.91
CASP4-212ENST00000533730 A0A1B0GUL6 1792 aa9.38□□□□□ -0.91
CASP4-212ENST00000533730 PNMA6EA0A0J9YXQ4 647 aa9.38□□□□□ -0.91
CASP4-212ENST00000533730 DDNO94850 711 aaPredicted RBP9.38□□□□□ -0.91
CASP4-212ENST00000533730 SLC5A1P13866 664 aa9.38□□□□□ -0.91
CASP4-212ENST00000533730 RPS12P25398 132 aaKnown RBP9.38□□□□□ -0.91
CASP4-212ENST00000533730 CXCL9Q07325 125 aa9.38□□□□□ -0.91
CASP4-212ENST00000533730 G3BP1Q13283 466 aaKnown RBP eCLIP9.38□□□□□ -0.91
CASP4-212ENST00000533730 HSP90AB4PQ58FF6 505 aa9.38□□□□□ -0.91
CASP4-212ENST00000533730 CAVIN4Q5BKX8 364 aa9.38□□□□□ -0.91
CASP4-212ENST00000533730 C20orf194Q5TEA3 1177 aa9.38□□□□□ -0.91
CASP4-212ENST00000533730 C1orf53Q5VUE5 145 aa9.38□□□□□ -0.91
CASP4-212ENST00000533730 CEP85Q6P2H3 762 aa9.38□□□□□ -0.91
CASP4-212ENST00000533730 PI16Q6UXB8 463 aa9.38□□□□□ -0.91
CASP4-212ENST00000533730 TREML4Q6UXN2 200 aa9.38□□□□□ -0.91
CASP4-212ENST00000533730 RIPOR1Q6ZS17 1223 aa9.38□□□□□ -0.91
CASP4-212ENST00000533730 ATG9AQ7Z3C6 839 aa9.38□□□□□ -0.91
CASP4-212ENST00000533730 GPR161Q8N6U8 529 aaKnown RBP9.38□□□□□ -0.91
CASP4-212ENST00000533730 VGLL2Q8N8G2 317 aa9.38□□□□□ -0.91
CASP4-212ENST00000533730 LPIN2Q92539 896 aa9.38□□□□□ -0.91
CASP4-212ENST00000533730 KLRG1Q96E93 195 aa9.38□□□□□ -0.91
CASP4-212ENST00000533730 ZNF837Q96EG3 531 aaPredicted RBP9.38□□□□□ -0.91
CASP4-212ENST00000533730 GPR101Q96P66 508 aaPredicted RBP9.38□□□□□ -0.91
CASP4-212ENST00000533730 ZIC5Q96T25 663 aa9.38□□□□□ -0.91
CASP4-212ENST00000533730 SIL1Q9H173 461 aa9.38□□□□□ -0.91
CASP4-212ENST00000533730 RUBCNLQ9H714 662 aa9.38□□□□□ -0.91
CASP4-212ENST00000533730 DBNDD1Q9H9R9 158 aa9.38□□□□□ -0.91
CASP4-212ENST00000533730 AKAP2Q9Y2D5 859 aa9.38□□□□□ -0.91
CASP4-212ENST00000533730 GJA3Q9Y6H8 435 aa9.38□□□□□ -0.91
CASP4-212ENST00000533730 WDR90Q96KV7 1748 aa9.38□□□□□ -0.91
CASP4-212ENST00000533730 YDJCA8MPS7 323 aa9.37□□□□□ -0.91
CASP4-212ENST00000533730 CPNE3O75131 537 aaKnown RBP9.37□□□□□ -0.91
CASP4-212ENST00000533730 NEFLP07196 543 aa9.37□□□□□ -0.91
CASP4-212ENST00000533730 LBRQ14739 615 aaKnown RBP9.37□□□□□ -0.91
CASP4-212ENST00000533730 SDE2Q6IQ49 451 aa9.37□□□□□ -0.91
CASP4-212ENST00000533730 C16orf71Q8IYS4 520 aaPredicted RBP9.37□□□□□ -0.91
CASP4-212ENST00000533730 VWA5B2Q8N398 1253 aa9.37□□□□□ -0.91
CASP4-212ENST00000533730 TTC16Q8NEE8 873 aa9.37□□□□□ -0.91
CASP4-212ENST00000533730 C12orf49Q9H741 205 aa9.37□□□□□ -0.91
CASP4-212ENST00000533730 NMRK2Q9NPI5 230 aa9.37□□□□□ -0.91
CASP4-212ENST00000533730 HACL1Q9UJ83 578 aa9.37□□□□□ -0.91
CASP4-212ENST00000533730 PA2G4Q9UQ80 394 aaKnown RBP9.37□□□□□ -0.91
CASP4-212ENST00000533730 ZNF609O15014 1411 aa9.37□□□□□ -0.91
CASP4-212ENST00000533730 GOLGB1Q14789 3259 aaKnown RBP9.37□□□□□ -0.91
CASP4-212ENST00000533730 MYO3BQ8WXR4 1341 aa9.36□□□□□ -0.91
CASP4-212ENST00000533730 IRS2Q9Y4H2 1338 aa9.36□□□□□ -0.91
CASP4-212ENST00000533730 SCN4AP35499 1836 aa9.36□□□□□ -0.91
CASP4-212ENST00000533730 WTIPA6NIX2 430 aaPredicted RBP9.36□□□□□ -0.91
CASP4-212ENST00000533730 PSMD14O00487 310 aa9.36□□□□□ -0.91
CASP4-212ENST00000533730 SURF6O75683 361 aaKnown RBP9.36□□□□□ -0.91
CASP4-212ENST00000533730 RAD17O75943 681 aa9.36□□□□□ -0.91
CASP4-212ENST00000533730 WFS1O76024 890 aa9.36□□□□□ -0.91
CASP4-212ENST00000533730 VIL1P09327 827 aaKnown RBP9.36□□□□□ -0.91
CASP4-212ENST00000533730 FGRP09769 529 aa9.36□□□□□ -0.91
CASP4-212ENST00000533730 FGFR2P21802 821 aa9.36□□□□□ -0.91
CASP4-212ENST00000533730 HIBADHP31937 336 aaKnown RBP9.36□□□□□ -0.91
CASP4-212ENST00000533730 MMP14P50281 582 aa9.36□□□□□ -0.91
CASP4-212ENST00000533730 OS9Q13438 667 aaPredicted RBP9.36□□□□□ -0.91
CASP4-212ENST00000533730 ATP2B3Q16720 1220 aa9.36□□□□□ -0.91
CASP4-212ENST00000533730 MEI1Q5TIA1 1274 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms