RNA–Protein interactions for RNA: ENST00000533690.5

ATM-221, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 3,354 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-221ENST00000533690 PCDHB8Q9UN66 801 aa4.48□□□□□ -1.69
ATM-221ENST00000533690 PCDHB13Q9Y5F0 798 aa4.48□□□□□ -1.69
ATM-221ENST00000533690 LGALS16A8MUM7 142 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 EIF3CLB5ME19 914 aaKnown RBP4.47□□□□□ -1.69
ATM-221ENST00000533690 ATP5J2-PTCD1G3V325 749 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 STXBP3O00186 592 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 TEX33O43247 280 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 KINO60870 393 aaKnown RBP4.47□□□□□ -1.69
ATM-221ENST00000533690 PTCD1O75127 700 aaKnown RBP4.47□□□□□ -1.69
ATM-221ENST00000533690 TUBBP07437 444 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 MYL6BP14649 208 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 LONP1P36776 959 aaKnown RBP4.47□□□□□ -1.69
ATM-221ENST00000533690 SYKP43405 635 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 METAP2P50579 478 aaKnown RBP eCLIP4.47□□□□□ -1.69
ATM-221ENST00000533690 USP14P54578 494 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 CABP4P57796 275 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 GABPAQ06546 454 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 CRY2Q49AN0 593 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 NOM1Q5C9Z4 860 aaKnown RBP4.47□□□□□ -1.69
ATM-221ENST00000533690 TCP11X2Q5H9J9 407 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 SUSD4Q5VX71 490 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 OTUD7BQ6GQQ9 843 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 TYW1BQ6NUM6 668 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 C3orf67Q6ZVT6 689 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 EPM2AIP1Q7L775 607 aaPredicted RBP4.47□□□□□ -1.69
ATM-221ENST00000533690 FILIP1Q7Z7B0 1213 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 SLFN11Q7Z7L1 901 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 CREG2Q8IUH2 290 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 NUTM2AQ8IVF1 878 aaPredicted RBP4.47□□□□□ -1.69
ATM-221ENST00000533690 TMTC2Q8N394 836 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 SRBD1Q8N5C6 995 aaKnown RBP4.47□□□□□ -1.69
ATM-221ENST00000533690 WASF1Q92558 559 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 SMARCE1Q969G3 411 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 EIF3CQ99613 913 aaKnown RBP4.47□□□□□ -1.69
ATM-221ENST00000533690 EDEM3Q9BZQ6 932 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 BSDC1Q9NW68 430 aaPredicted RBP4.47□□□□□ -1.69
ATM-221ENST00000533690 RCCD1A6NED2 376 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 C5orf60A6NFR6 353 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 ERCC3P19447 782 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 RBL2Q08999 1139 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 ITPK1Q13572 414 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 MTF1Q14872 753 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 KRT31Q15323 416 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 PARP10Q53GL7 1025 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 GALNT17Q6IS24 598 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 CCDC73Q6ZRK6 1079 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 SUGP1Q8IWZ8 645 aaKnown RBP4.47□□□□□ -1.69
ATM-221ENST00000533690 SYNE4Q8N205 404 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 FANCBQ8NB91 859 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 DHX58Q96C10 678 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 BAG1Q99933 345 aaPredicted RBP4.47□□□□□ -1.69
ATM-221ENST00000533690 DEFB129Q9H1M3 183 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 ESF1Q9H501 851 aaKnown RBP4.47□□□□□ -1.69
ATM-221ENST00000533690 YY1AP1Q9H869 796 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 SERTAD1Q9UHV2 236 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 HPCAL4Q9UM19 191 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 OTOFQ9HC10 1997 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 CYP3A7-CYP3A51PA0A087WV96 503 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 FAM205CA6NFA0 338 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 LRRIQ3A6PVS8 624 aaPredicted RBP4.47□□□□□ -1.69
ATM-221ENST00000533690 TRIM66O15016 1216 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 NKRFO15226 690 aaKnown RBP eCLIP4.47□□□□□ -1.69
ATM-221ENST00000533690 NOL4O94818 638 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 CYP3A7P24462 503 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 EEF1GP26641 437 aaKnown RBP4.47□□□□□ -1.69
ATM-221ENST00000533690 PMS1P54277 932 aaKnown RBP4.47□□□□□ -1.69
ATM-221ENST00000533690 PPARAQ07869 468 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 STK3Q13188 491 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 UBE4AQ14139 1066 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 RRP12Q5JTH9 1297 aaKnown RBP4.47□□□□□ -1.69
ATM-221ENST00000533690 CENPPQ6IPU0 288 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 C6orf89Q6UWU4 347 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 SYT10Q6XYQ8 523 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 TMC6Q7Z403 805 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 YTHDF3Q7Z739 585 aaKnown RBP4.47□□□□□ -1.69
ATM-221ENST00000533690 ZNF654Q8IZM8 581 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 RETREG2Q8NC44 543 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 PYM1Q9BRP8 204 aaKnown RBP4.47□□□□□ -1.69
ATM-221ENST00000533690 CDCA7Q9BWT1 371 aaPredicted RBP4.47□□□□□ -1.69
ATM-221ENST00000533690 SPZ1Q9BXG8 430 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 ZMYND12Q9H0C1 365 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 SAMSN1Q9NSI8 373 aaKnown RBP4.47□□□□□ -1.69
ATM-221ENST00000533690 ASAP1Q9ULH1 1129 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 TTC7AQ9ULT0 858 aaPredicted RBP4.47□□□□□ -1.69
ATM-221ENST00000533690 TTF2Q9UNY4 1162 aaKnown RBP4.47□□□□□ -1.69
ATM-221ENST00000533690 USTQ9Y2C2 406 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 PCDHA3Q9Y5H8 950 aa4.47□□□□□ -1.69
ATM-221ENST00000533690 PLXNA1Q9UIW2 1896 aa4.46□□□□□ -1.69
ATM-221ENST00000533690 FRMPD4Q14CM0 1322 aa4.46□□□□□ -1.69
ATM-221ENST00000533690 ATRNL1Q5VV63 1379 aa4.46□□□□□ -1.7
ATM-221ENST00000533690 POTEB2H3BUK9 544 aa4.46□□□□□ -1.7
ATM-221ENST00000533690 SMIM22K7EJ46 135 aa4.46□□□□□ -1.7
ATM-221ENST00000533690 ZNF213O14771 459 aa4.46□□□□□ -1.7
ATM-221ENST00000533690 ZSCAN12O43309 604 aa4.46□□□□□ -1.7
ATM-221ENST00000533690 CYTH3O43739 400 aa4.46□□□□□ -1.7
ATM-221ENST00000533690 ADAMTS2O95450 1211 aa4.46□□□□□ -1.7
ATM-221ENST00000533690 GSCP56915 257 aaPredicted RBP4.46□□□□□ -1.7
ATM-221ENST00000533690 JAM2P57087 298 aa4.46□□□□□ -1.7
ATM-221ENST00000533690 CCT2P78371 535 aaKnown RBP4.46□□□□□ -1.7
ATM-221ENST00000533690 ST5P78524 1137 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms