RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, human

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-223	ENST00000533299	NFKB2	Q00653	900 aa		5.13	□□□□□ -1.59
LMO7-223	ENST00000533299	RAB33A	Q14088	237 aa		5.13	□□□□□ -1.59
LMO7-223	ENST00000533299	ZYX	Q15942	572 aa	Known RBP	5.13	□□□□□ -1.59
LMO7-223	ENST00000533299	FBXO15	Q8NCQ5	510 aa	Predicted RBP	5.13	□□□□□ -1.59
LMO7-223	ENST00000533299	HNRNPLL	Q8WVV9	542 aa	Known RBP	5.13	□□□□□ -1.59
LMO7-223	ENST00000533299	CD320	Q9NPF0	282 aa		5.13	□□□□□ -1.59
LMO7-223	ENST00000533299	GPATCH2	Q9NW75	528 aa		5.13	□□□□□ -1.59
LMO7-223	ENST00000533299	SIRPG	Q9P1W8	387 aa		5.13	□□□□□ -1.59
LMO7-223	ENST00000533299	FBXL21	Q9UKT6	434 aa		5.13	□□□□□ -1.59
LMO7-223	ENST00000533299	PCDHB12	Q9Y5F1	795 aa		5.13	□□□□□ -1.59
LMO7-223	ENST00000533299	CAPN6	Q9Y6Q1	641 aa		5.13	□□□□□ -1.59
LMO7-223	ENST00000533299	KCNA10	Q16322	511 aa		5.13	□□□□□ -1.59
LMO7-223	ENST00000533299	CLEC16A	Q2KHT3	1053 aa		5.13	□□□□□ -1.59
LMO7-223	ENST00000533299	ANKRD39	Q53RE8	183 aa		5.13	□□□□□ -1.59
LMO7-223	ENST00000533299	HEATR6	Q6AI08	1181 aa	Known RBP	5.13	□□□□□ -1.59
LMO7-223	ENST00000533299	FAM181A	Q8N9Y4	354 aa		5.13	□□□□□ -1.59
LMO7-223	ENST00000533299	PMFBP1	Q8TBY8	1022 aa		5.13	□□□□□ -1.59
LMO7-223	ENST00000533299	ENOX1	Q8TC92	643 aa	Known RBP	5.13	□□□□□ -1.59
LMO7-223	ENST00000533299	VWCE	Q96DN2	955 aa		5.13	□□□□□ -1.59
LMO7-223	ENST00000533299	GBP3	Q9H0R5	595 aa		5.13	□□□□□ -1.59
LMO7-223	ENST00000533299	TNKS2	Q9H2K2	1166 aa		5.13	□□□□□ -1.59
LMO7-223	ENST00000533299	LTBP3	Q9NS15	1303 aa		5.12	□□□□□ -1.59
LMO7-223	ENST00000533299	KLF4	O43474	513 aa		5.12	□□□□□ -1.59
LMO7-223	ENST00000533299	TP53	P04637	393 aa	Predicted RBP	5.12	□□□□□ -1.59
LMO7-223	ENST00000533299	ZNF143	P52747	638 aa	Predicted RBP	5.12	□□□□□ -1.59
LMO7-223	ENST00000533299	PRKCQ	Q04759	706 aa		5.12	□□□□□ -1.59
LMO7-223	ENST00000533299	TNK2	Q07912	1038 aa		5.12	□□□□□ -1.59
LMO7-223	ENST00000533299	AUH	Q13825	339 aa	Known RBP	5.12	□□□□□ -1.59
LMO7-223	ENST00000533299	NBPF9	Q3BBW0	867 aa		5.12	□□□□□ -1.59
LMO7-223	ENST00000533299	KIAA1211L	Q6NV74	962 aa		5.12	□□□□□ -1.59
LMO7-223	ENST00000533299	SLC23A3	Q6PIS1	610 aa		5.12	□□□□□ -1.59
LMO7-223	ENST00000533299	THAP5	Q7Z6K1	395 aa		5.12	□□□□□ -1.59
LMO7-223	ENST00000533299	PRRT2	Q7Z6L0	340 aa	Predicted RBP	5.12	□□□□□ -1.59
LMO7-223	ENST00000533299	C7orf61	Q8IZ16	206 aa		5.12	□□□□□ -1.59
LMO7-223	ENST00000533299	DTWD2	Q8NBA8	298 aa		5.12	□□□□□ -1.59
LMO7-223	ENST00000533299	ASB11	Q8WXH4	323 aa		5.12	□□□□□ -1.59
LMO7-223	ENST00000533299	LIN37	Q96GY3	246 aa	Predicted RBP	5.12	□□□□□ -1.59
LMO7-223	ENST00000533299	ZNF512B	Q96KM6	892 aa	Predicted RBP	5.12	□□□□□ -1.59
LMO7-223	ENST00000533299	HRASLS5	Q96KN8	279 aa		5.12	□□□□□ -1.59
LMO7-223	ENST00000533299	DNAJC2	Q99543	621 aa	Known RBP	5.12	□□□□□ -1.59
LMO7-223	ENST00000533299	PRR13	Q9NZ81	148 aa		5.12	□□□□□ -1.59
LMO7-223	ENST00000533299	ADRB1	P08588	477 aa		5.11	□□□□□ -1.59
LMO7-223	ENST00000533299	TMEM253	P0C7T8	217 aa		5.11	□□□□□ -1.59
LMO7-223	ENST00000533299	ITGA4	P13612	1032 aa		5.11	□□□□□ -1.59
LMO7-223	ENST00000533299	NOL9	Q5SY16	702 aa	Known RBP	5.11	□□□□□ -1.59
LMO7-223	ENST00000533299	CDKAL1	Q5VV42	579 aa		5.11	□□□□□ -1.59
LMO7-223	ENST00000533299	TDRD10	Q5VZ19	366 aa	Known RBP	5.11	□□□□□ -1.59
LMO7-223	ENST00000533299	FAM178B	Q8IXR5	827 aa		5.11	□□□□□ -1.59
LMO7-223	ENST00000533299	PLD6	Q8N2A8	252 aa	Known RBP	5.11	□□□□□ -1.59
LMO7-223	ENST00000533299	CXorf38	Q8TB03	319 aa		5.11	□□□□□ -1.59
LMO7-223	ENST00000533299	GPR62	Q9BZJ7	368 aa		5.11	□□□□□ -1.59
LMO7-223	ENST00000533299	ANKRD34B	A5PLL1	514 aa		5.11	□□□□□ -1.59
LMO7-223	ENST00000533299	PPM1B	O75688	479 aa		5.11	□□□□□ -1.59
LMO7-223	ENST00000533299	NFIX	Q14938	502 aa		5.11	□□□□□ -1.59
LMO7-223	ENST00000533299	DDR2	Q16832	855 aa		5.11	□□□□□ -1.59
LMO7-223	ENST00000533299	NKPD1	Q17RQ9	610 aa		5.11	□□□□□ -1.59
LMO7-223	ENST00000533299	C6orf15	Q6UXA7	325 aa	Predicted RBP	5.11	□□□□□ -1.59
LMO7-223	ENST00000533299	PRR23B	Q6ZRT6	265 aa		5.11	□□□□□ -1.59
LMO7-223	ENST00000533299	EEPD1	Q7L9B9	569 aa		5.11	□□□□□ -1.59
LMO7-223	ENST00000533299	ADAT2	Q7Z6V5	191 aa	Known RBP	5.11	□□□□□ -1.59
LMO7-223	ENST00000533299		Q96M66	194 aa		5.11	□□□□□ -1.59
LMO7-223	ENST00000533299	APBA2	Q99767	749 aa		5.11	□□□□□ -1.59
LMO7-223	ENST00000533299	EPN3	Q9H201	632 aa		5.11	□□□□□ -1.59
LMO7-223	ENST00000533299	PCDHB10	Q9UN67	800 aa		5.11	□□□□□ -1.59
LMO7-223	ENST00000533299	CNTNAP4	Q9C0A0	1308 aa		5.1	□□□□□ -1.59
LMO7-223	ENST00000533299		A0A0G2JLL6	359 aa	Predicted RBP	5.1	□□□□□ -1.59
LMO7-223	ENST00000533299	PRR33	A8MZF0	331 aa		5.1	□□□□□ -1.59
LMO7-223	ENST00000533299		C9IYK1	514 aa		5.1	□□□□□ -1.59
LMO7-223	ENST00000533299	AGRP	O00253	132 aa		5.1	□□□□□ -1.59
LMO7-223	ENST00000533299	MED14OS	P0DP75	135 aa		5.1	□□□□□ -1.59
LMO7-223	ENST00000533299	NMI	Q13287	307 aa	Predicted RBP	5.1	□□□□□ -1.59
LMO7-223	ENST00000533299	NFE2L2	Q16236	605 aa		5.1	□□□□□ -1.59
LMO7-223	ENST00000533299	SPACA3	Q8IXA5	215 aa		5.1	□□□□□ -1.59
LMO7-223	ENST00000533299	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	5.1	□□□□□ -1.59
LMO7-223	ENST00000533299	MKL1	Q969V6	931 aa		5.1	□□□□□ -1.59
LMO7-223	ENST00000533299	SYTL4	Q96C24	671 aa	Predicted RBP	5.1	□□□□□ -1.59
LMO7-223	ENST00000533299	HAUS7	Q99871	368 aa		5.1	□□□□□ -1.59
LMO7-223	ENST00000533299	DSCC1	Q9BVC3	393 aa		5.1	□□□□□ -1.59
LMO7-223	ENST00000533299	ST7	Q9NRC1	585 aa		5.1	□□□□□ -1.59
LMO7-223	ENST00000533299	FAM86C1	Q9NVL1	165 aa		5.1	□□□□□ -1.59
LMO7-223	ENST00000533299	WHRN	Q9P202	907 aa		5.1	□□□□□ -1.59
LMO7-223	ENST00000533299		A0A087WZG4	1122 aa		5.09	□□□□□ -1.59
LMO7-223	ENST00000533299		H3BS24	57 aa		5.09	□□□□□ -1.59
LMO7-223	ENST00000533299	LRRN2	O75325	713 aa		5.09	□□□□□ -1.59
LMO7-223	ENST00000533299	CD247	P20963	164 aa		5.09	□□□□□ -1.59
LMO7-223	ENST00000533299	AOC3	Q16853	763 aa		5.09	□□□□□ -1.59
LMO7-223	ENST00000533299	AXDND1	Q5T1B0	1012 aa	Predicted RBP	5.09	□□□□□ -1.59
LMO7-223	ENST00000533299	DCAF15	Q66K64	600 aa		5.09	□□□□□ -1.59
LMO7-223	ENST00000533299	TMPRSS7	Q7RTY8	843 aa		5.09	□□□□□ -1.59
LMO7-223	ENST00000533299	LRP10	Q7Z4F1	713 aa		5.09	□□□□□ -1.59
LMO7-223	ENST00000533299	PPFIBP1	Q86W92	1011 aa		5.09	□□□□□ -1.59
LMO7-223	ENST00000533299	HSPA12B	Q96MM6	686 aa		5.09	□□□□□ -1.59
LMO7-223	ENST00000533299	PRDM14	Q9GZV8	571 aa		5.09	□□□□□ -1.59
LMO7-223	ENST00000533299	OSBPL2	Q9H1P3	480 aa		5.09	□□□□□ -1.59
LMO7-223	ENST00000533299	ZSWIM5	Q9P217	1185 aa		5.09	□□□□□ -1.59
LMO7-223	ENST00000533299	PLAGL2	Q9UPG8	496 aa		5.09	□□□□□ -1.59
LMO7-223	ENST00000533299	SUGT1	Q9Y2Z0	365 aa		5.09	□□□□□ -1.59
LMO7-223	ENST00000533299	SF3B6	Q9Y3B4	125 aa	Known RBP	5.09	□□□□□ -1.59
LMO7-223	ENST00000533299	ST14	Q9Y5Y6	855 aa		5.09	□□□□□ -1.59
LMO7-223	ENST00000533299	SSU72P8	A0A1W2PR75	194 aa		5.09	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms