RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 RILPL2Q969X0 211 aa27.8■■■□□ 2.04
SMPD1-209ENST00000533196 MAML3Q96JK9 1138 aa27.8■■■□□ 2.04
SMPD1-209ENST00000533196 NRBP1Q9UHY1 535 aa27.8■■■□□ 2.04
SMPD1-209ENST00000533196 BMP3P12645 472 aa27.79■■■□□ 2.04
SMPD1-209ENST00000533196 NMIQ13287 307 aaPredicted RBP27.79■■■□□ 2.04
SMPD1-209ENST00000533196 CHRDL2Q6WN34 429 aa27.79■■■□□ 2.04
SMPD1-209ENST00000533196 CTDP1Q9Y5B0 961 aaPredicted RBP27.79■■■□□ 2.04
SMPD1-209ENST00000533196 SUPT16HQ9Y5B9 1047 aaKnown RBP27.79■■■□□ 2.04
SMPD1-209ENST00000533196 CCDC171Q6TFL3 1326 aa27.78■■■□□ 2.04
SMPD1-209ENST00000533196 FGAP02671 866 aa27.78■■■□□ 2.04
SMPD1-209ENST00000533196 HSPD1P10809 573 aaKnown RBP27.78■■■□□ 2.04
SMPD1-209ENST00000533196 OAZ1P54368 228 aa27.78■■■□□ 2.04
SMPD1-209ENST00000533196 TRPV1Q8NER1 839 aa27.78■■■□□ 2.04
SMPD1-209ENST00000533196 GMCL1Q96IK5 515 aa27.78■■■□□ 2.04
SMPD1-209ENST00000533196 SLC38A10Q9HBR0 1119 aa27.78■■■□□ 2.04
SMPD1-209ENST00000533196 PFASO15067 1338 aa27.77■■■□□ 2.04
SMPD1-209ENST00000533196 SNRNP48Q6IEG0 339 aaKnown RBP27.77■■■□□ 2.04
SMPD1-209ENST00000533196 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.77■■■□□ 2.04
SMPD1-209ENST00000533196 SEPT4O43236 478 aa27.76■■■□□ 2.03
SMPD1-209ENST00000533196 RANBP6O60518 1105 aaKnown RBP27.76■■■□□ 2.03
SMPD1-209ENST00000533196 PLA2G6O60733 806 aa27.76■■■□□ 2.03
SMPD1-209ENST00000533196 PCP11498 1178 aaKnown RBP27.76■■■□□ 2.03
SMPD1-209ENST00000533196 SDSP20132 328 aa27.76■■■□□ 2.03
SMPD1-209ENST00000533196 NOVP48745 357 aa27.76■■■□□ 2.03
SMPD1-209ENST00000533196 ZNF792Q3KQV3 632 aa27.76■■■□□ 2.03
SMPD1-209ENST00000533196 FAM160B2Q86V87 743 aa27.76■■■□□ 2.03
SMPD1-209ENST00000533196 CHURC1Q8WUH1 139 aa27.76■■■□□ 2.03
SMPD1-209ENST00000533196 KIFC2Q96AC6 838 aa27.76■■■□□ 2.03
SMPD1-209ENST00000533196 STX8Q9UNK0 236 aa27.76■■■□□ 2.03
SMPD1-209ENST00000533196 HIP1O00291 1037 aa27.75■■■□□ 2.03
SMPD1-209ENST00000533196 ZNF589Q86UQ0 364 aaPredicted RBP27.75■■■□□ 2.03
SMPD1-209ENST00000533196 MSL3Q8N5Y2 521 aaKnown RBP27.75■■■□□ 2.03
SMPD1-209ENST00000533196 PRO3102Q9H379 93 aa27.75■■■□□ 2.03
SMPD1-209ENST00000533196 IL17RBQ9NRM6 502 aa27.75■■■□□ 2.03
SMPD1-209ENST00000533196 FBXO40Q9UH90 709 aa27.75■■■□□ 2.03
SMPD1-209ENST00000533196 SMCHD1A6NHR9 2005 aa27.74■■■□□ 2.03
SMPD1-209ENST00000533196 DNM1LO00429 736 aa27.74■■■□□ 2.03
SMPD1-209ENST00000533196 SLC1A4P43007 532 aa27.74■■■□□ 2.03
SMPD1-209ENST00000533196 STAT2P52630 851 aa27.74■■■□□ 2.03
SMPD1-209ENST00000533196 ARRDC4Q8NCT1 418 aa27.74■■■□□ 2.03
SMPD1-209ENST00000533196 STAG1Q8WVM7 1258 aa27.74■■■□□ 2.03
SMPD1-209ENST00000533196 TINF2Q9BSI4 451 aa27.74■■■□□ 2.03
SMPD1-209ENST00000533196 TMEM232C9JQI7 657 aa27.73■■■□□ 2.03
SMPD1-209ENST00000533196 PGK2P07205 417 aa27.73■■■□□ 2.03
SMPD1-209ENST00000533196 C7orf61Q8IZ16 206 aa27.73■■■□□ 2.03
SMPD1-209ENST00000533196 CPXCR1Q8N123 301 aa27.73■■■□□ 2.03
SMPD1-209ENST00000533196 CHST13Q8NET6 341 aa27.73■■■□□ 2.03
SMPD1-209ENST00000533196 INCENPQ9NQS7 918 aa27.73■■■□□ 2.03
SMPD1-209ENST00000533196 TCP11L1Q9NUJ3 509 aa27.73■■■□□ 2.03
SMPD1-209ENST00000533196 TACC3Q9Y6A5 838 aa27.73■■■□□ 2.03
SMPD1-209ENST00000533196 A0A1W2PPC1 479 aa27.72■■■□□ 2.03
SMPD1-209ENST00000533196 NT5C2P49902 561 aa27.72■■■□□ 2.03
SMPD1-209ENST00000533196 FXR1P51114 621 aaKnown RBP eCLIP27.72■■■□□ 2.03
SMPD1-209ENST00000533196 RBM27Q9P2N5 1060 aaKnown RBP27.72■■■□□ 2.03
SMPD1-209ENST00000533196 RIPK3Q9Y572 518 aa27.72■■■□□ 2.03
SMPD1-209ENST00000533196 MCCP23508 829 aa27.71■■■□□ 2.03
SMPD1-209ENST00000533196 RCSD1Q6JBY9 416 aa27.71■■■□□ 2.03
SMPD1-209ENST00000533196 DDX11Q96FC9 970 aa27.71■■■□□ 2.03
SMPD1-209ENST00000533196 RAVER2Q9HCJ3 691 aaKnown RBP27.71■■■□□ 2.03
SMPD1-209ENST00000533196 TOMM22Q9NS69 142 aa27.71■■■□□ 2.03
SMPD1-209ENST00000533196 DIAPH3Q9NSV4 1193 aa27.71■■■□□ 2.03
SMPD1-209ENST00000533196 NMT2O60551 498 aa27.7■■■□□ 2.02
SMPD1-209ENST00000533196 ZNF467Q7Z7K2 595 aaPredicted RBP27.7■■■□□ 2.02
SMPD1-209ENST00000533196 RNF41Q9H4P4 317 aaPredicted RBP27.7■■■□□ 2.02
SMPD1-209ENST00000533196 ISY1Q9ULR0 285 aaKnown RBP27.7■■■□□ 2.02
SMPD1-209ENST00000533196 DNAJC25-GNG10A0A024R161 153 aa27.69■■■□□ 2.02
SMPD1-209ENST00000533196 PRAMEF19Q5SWL8 479 aa27.69■■■□□ 2.02
SMPD1-209ENST00000533196 AKNAD1Q5T1N1 836 aa27.69■■■□□ 2.02
SMPD1-209ENST00000533196 MFSD6Q6ZSS7 791 aa27.69■■■□□ 2.02
SMPD1-209ENST00000533196 DCAF4Q8WV16 495 aa27.69■■■□□ 2.02
SMPD1-209ENST00000533196 SYNGAP1Q96PV0 1343 aa27.68■■■□□ 2.02
SMPD1-209ENST00000533196 IKQ13123 557 aaPredicted RBP27.68■■■□□ 2.02
SMPD1-209ENST00000533196 TKFCQ3LXA3 575 aa27.68■■■□□ 2.02
SMPD1-209ENST00000533196 MAMDC4Q6UXC1 1216 aa27.68■■■□□ 2.02
SMPD1-209ENST00000533196 SENP6Q9GZR1 1112 aaPredicted RBP27.68■■■□□ 2.02
SMPD1-209ENST00000533196 PCDH10Q9P2E7 1040 aa27.68■■■□□ 2.02
SMPD1-209ENST00000533196 LAMA4Q16363 1823 aa27.67■■■□□ 2.02
SMPD1-209ENST00000533196 KBTBD13C9JR72 458 aa27.67■■■□□ 2.02
SMPD1-209ENST00000533196 TOP1P11387 765 aaKnown RBP27.67■■■□□ 2.02
SMPD1-209ENST00000533196 RRP12Q5JTH9 1297 aaKnown RBP27.67■■■□□ 2.02
SMPD1-209ENST00000533196 CWC27Q6UX04 472 aaKnown RBP27.67■■■□□ 2.02
SMPD1-209ENST00000533196 ANKRD35Q8N283 1001 aa27.67■■■□□ 2.02
SMPD1-209ENST00000533196 TTC14Q96N46 770 aa27.67■■■□□ 2.02
SMPD1-209ENST00000533196 CNPY2Q9Y2B0 182 aa27.67■■■□□ 2.02
SMPD1-209ENST00000533196 BMP8BP34820 402 aa27.66■■■□□ 2.02
SMPD1-209ENST00000533196 SLC4A3P48751 1232 aa27.66■■■□□ 2.02
SMPD1-209ENST00000533196 HAND2P61296 217 aa27.66■■■□□ 2.02
SMPD1-209ENST00000533196 LRRC26Q2I0M4 334 aa27.66■■■□□ 2.02
SMPD1-209ENST00000533196 GDF15Q99988 308 aa27.66■■■□□ 2.02
SMPD1-209ENST00000533196 ACAD9Q9H845 621 aa27.66■■■□□ 2.02
SMPD1-209ENST00000533196 ZMYND8Q9ULU4 1186 aaPredicted RBP27.66■■■□□ 2.02
SMPD1-209ENST00000533196 ZNF213O14771 459 aa27.65■■■□□ 2.02
SMPD1-209ENST00000533196 ZNF865P0CJ78 1059 aaPredicted RBP27.65■■■□□ 2.02
SMPD1-209ENST00000533196 RARBP10826 455 aa27.65■■■□□ 2.02
SMPD1-209ENST00000533196 AKR1A1P14550 325 aa27.65■■■□□ 2.02
SMPD1-209ENST00000533196 KCTD1Q719H9 257 aa27.65■■■□□ 2.02
SMPD1-209ENST00000533196 ZNF536O15090 1300 aa27.65■■■□□ 2.02
SMPD1-209ENST00000533196 GJC2Q5T442 439 aaPredicted RBP27.64■■■□□ 2.02
SMPD1-209ENST00000533196 TMEM47Q9BQJ4 181 aa27.64■■■□□ 2.02
SMPD1-209ENST00000533196 DSCC1Q9BVC3 393 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms