RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 IRF2BP1Q8IU81 584 aa16.83■□□□□ 0.28
SSH3-210ENST00000532881 SMARCC1Q92922 1105 aaPredicted RBP16.83■□□□□ 0.28
SSH3-210ENST00000532881 PANX2Q96RD6 677 aa16.83■□□□□ 0.28
SSH3-210ENST00000532881 UIMC1Q96RL1 719 aa16.83■□□□□ 0.28
SSH3-210ENST00000532881 ARPP21Q9UBL0 812 aaPredicted RBP16.83■□□□□ 0.28
SSH3-210ENST00000532881 PCDHA6Q9UN73 950 aa16.83■□□□□ 0.28
SSH3-210ENST00000532881 PCDHA8Q9Y5H6 950 aa16.83■□□□□ 0.28
SSH3-210ENST00000532881 TSPY3P0CV98 308 aa16.82■□□□□ 0.28
SSH3-210ENST00000532881 TSPY8P0CW00 308 aa16.82■□□□□ 0.28
SSH3-210ENST00000532881 BMS1Q14692 1282 aaKnown RBP16.82■□□□□ 0.28
SSH3-210ENST00000532881 SLC10A5Q5PT55 438 aa16.82■□□□□ 0.28
SSH3-210ENST00000532881 SLC35F6Q8N357 371 aa16.82■□□□□ 0.28
SSH3-210ENST00000532881 KLK7P49862 253 aa16.82■□□□□ 0.28
SSH3-210ENST00000532881 UBXN1Q04323 297 aa16.82■□□□□ 0.28
SSH3-210ENST00000532881 FILIP1LQ4L180 1135 aa16.82■□□□□ 0.28
SSH3-210ENST00000532881 TCP11X2Q5H9J9 407 aa16.82■□□□□ 0.28
SSH3-210ENST00000532881 MKRN1Q9UHC7 482 aaKnown RBP16.82■□□□□ 0.28
SSH3-210ENST00000532881 NARFQ9UHQ1 456 aa16.82■□□□□ 0.28
SSH3-210ENST00000532881 PCDHA4Q9UN74 947 aa16.82■□□□□ 0.28
SSH3-210ENST00000532881 CCDC194A0A1B0GVG4 234 aa16.81■□□□□ 0.28
SSH3-210ENST00000532881 GTPBP6O43824 516 aaPredicted RBP16.81■□□□□ 0.28
SSH3-210ENST00000532881 LDHBP07195 334 aaKnown RBP16.81■□□□□ 0.28
SSH3-210ENST00000532881 USP17L2Q6R6M4 530 aa16.81■□□□□ 0.28
SSH3-210ENST00000532881 SUGCTQ9HAC7 445 aa16.81■□□□□ 0.28
SSH3-210ENST00000532881 ABHD10Q9NUJ1 306 aa16.81■□□□□ 0.28
SSH3-210ENST00000532881 LAMB2P55268 1798 aa16.81■□□□□ 0.28
SSH3-210ENST00000532881 SRCAPQ6ZRS2 3230 aa16.81■□□□□ 0.28
SSH3-210ENST00000532881 TBC1D8O95759 1140 aa16.81■□□□□ 0.28
SSH3-210ENST00000532881 KRT9P35527 623 aa16.81■□□□□ 0.28
SSH3-210ENST00000532881 TPTE2Q6XPS3 522 aa16.81■□□□□ 0.28
SSH3-210ENST00000532881 TMEM47Q9BQJ4 181 aa16.81■□□□□ 0.28
SSH3-210ENST00000532881 TUBB4AP04350 444 aa16.8■□□□□ 0.28
SSH3-210ENST00000532881 SLURP2P0DP57 97 aa16.8■□□□□ 0.28
SSH3-210ENST00000532881 ZNF658Q5TYW1 1059 aaPredicted RBP16.8■□□□□ 0.28
SSH3-210ENST00000532881 RSRC2Q7L4I2 434 aaKnown RBP16.8■□□□□ 0.28
SSH3-210ENST00000532881 CLEC10AQ8IUN9 316 aa16.8■□□□□ 0.28
SSH3-210ENST00000532881 DISC1Q9NRI5 854 aa16.8■□□□□ 0.28
SSH3-210ENST00000532881 LETM2Q2VYF4 491 aa16.8■□□□□ 0.28
SSH3-210ENST00000532881 CC2D1AQ6P1N0 951 aaPredicted RBP16.8■□□□□ 0.28
SSH3-210ENST00000532881 DTHD1Q6ZMT9 781 aa16.8■□□□□ 0.28
SSH3-210ENST00000532881 UBA5Q9GZZ9 404 aa16.8■□□□□ 0.28
SSH3-210ENST00000532881 RNF216Q9NWF9 866 aaPredicted RBP16.8■□□□□ 0.28
SSH3-210ENST00000532881 RWDD2AQ9UIY3 292 aa16.8■□□□□ 0.28
SSH3-210ENST00000532881 ENC1O14682 589 aa16.79■□□□□ 0.28
SSH3-210ENST00000532881 BMP15O95972 392 aa16.79■□□□□ 0.28
SSH3-210ENST00000532881 KIF5BP33176 963 aa16.79■□□□□ 0.28
SSH3-210ENST00000532881 GABPB1Q06547 395 aaPredicted RBP16.79■□□□□ 0.28
SSH3-210ENST00000532881 KIF4BQ2VIQ3 1234 aa16.79■□□□□ 0.28
SSH3-210ENST00000532881 SBK1Q52WX2 424 aa16.79■□□□□ 0.28
SSH3-210ENST00000532881 SRRTQ9BXP5 876 aaKnown RBP16.79■□□□□ 0.28
SSH3-210ENST00000532881 TTC26A0AVF1 554 aa16.79■□□□□ 0.28
SSH3-210ENST00000532881 M0R2N6 131 aa16.79■□□□□ 0.28
SSH3-210ENST00000532881 PARP1P09874 1014 aaKnown RBP16.79■□□□□ 0.28
SSH3-210ENST00000532881 RHOXF2BP0C7M4 288 aa16.79■□□□□ 0.28
SSH3-210ENST00000532881 EIF6P56537 245 aaKnown RBP16.79■□□□□ 0.28
SSH3-210ENST00000532881 ZNF444Q8N0Y2 327 aaPredicted RBP16.79■□□□□ 0.28
SSH3-210ENST00000532881 CTAGE1Q96RT6 745 aa16.79■□□□□ 0.28
SSH3-210ENST00000532881 RHOXF2Q9BQY4 288 aa16.79■□□□□ 0.28
SSH3-210ENST00000532881 LIMA1Q9UHB6 759 aaKnown RBP16.79■□□□□ 0.28
SSH3-210ENST00000532881 RREB1Q92766 1687 aa16.78■□□□□ 0.28
SSH3-210ENST00000532881 IRS2Q9Y4H2 1338 aa16.78■□□□□ 0.28
SSH3-210ENST00000532881 STXBP3O00186 592 aa16.78■□□□□ 0.28
SSH3-210ENST00000532881 FCER1AP12319 257 aa16.78■□□□□ 0.28
SSH3-210ENST00000532881 PNKPQ96T60 521 aa16.78■□□□□ 0.28
SSH3-210ENST00000532881 NOL10Q9BSC4 688 aaKnown RBP16.78■□□□□ 0.28
SSH3-210ENST00000532881 ANKRD2Q9GZV1 360 aa16.78■□□□□ 0.28
SSH3-210ENST00000532881 TMEM260Q9NX78 707 aa16.78■□□□□ 0.28
SSH3-210ENST00000532881 HDAC6Q9UBN7 1215 aa16.78■□□□□ 0.28
SSH3-210ENST00000532881 CCNL1Q9UK58 526 aaPredicted RBP16.78■□□□□ 0.28
SSH3-210ENST00000532881 GOLGA6L9A6NEM1 432 aa16.78■□□□□ 0.28
SSH3-210ENST00000532881 KLRF2D3W0D1 207 aa16.78■□□□□ 0.28
SSH3-210ENST00000532881 SEMA3EO15041 775 aa16.78■□□□□ 0.28
SSH3-210ENST00000532881 KLRC4O43908 158 aa16.78■□□□□ 0.28
SSH3-210ENST00000532881 KIF5CO60282 957 aa16.78■□□□□ 0.28
SSH3-210ENST00000532881 CCNT1O60563 726 aaKnown RBP16.78■□□□□ 0.28
SSH3-210ENST00000532881 RPS6KA4O75676 772 aa16.78■□□□□ 0.28
SSH3-210ENST00000532881 PCP11498 1178 aaKnown RBP16.78■□□□□ 0.28
SSH3-210ENST00000532881 RASA1P20936 1047 aa16.78■□□□□ 0.28
SSH3-210ENST00000532881 UBA7P41226 1012 aa16.78■□□□□ 0.28
SSH3-210ENST00000532881 TXNRD1Q16881 649 aa16.78■□□□□ 0.28
SSH3-210ENST00000532881 NCAPH2Q6IBW4 605 aa16.78■□□□□ 0.28
SSH3-210ENST00000532881 ARGLU1Q9NWB6 273 aaPredicted RBP16.78■□□□□ 0.28
SSH3-210ENST00000532881 GUCA1BQ9UMX6 200 aa16.78■□□□□ 0.28
SSH3-210ENST00000532881 REXO2Q9Y3B8 237 aaKnown RBP16.78■□□□□ 0.28
SSH3-210ENST00000532881 KIAA1551Q9HCM1 1747 aa16.77■□□□□ 0.28
SSH3-210ENST00000532881 ARHGAP25P42331 645 aa16.77■□□□□ 0.28
SSH3-210ENST00000532881 TECP42680 631 aa16.77■□□□□ 0.28
SSH3-210ENST00000532881 CHMP4BP1P59074 171 aa16.77■□□□□ 0.28
SSH3-210ENST00000532881 GJA10Q969M2 543 aa16.77■□□□□ 0.28
SSH3-210ENST00000532881 NGLY1Q96IV0 654 aa16.77■□□□□ 0.28
SSH3-210ENST00000532881 HINFPQ9BQA5 517 aa16.77■□□□□ 0.28
SSH3-210ENST00000532881 AGPAT5Q9NUQ2 364 aa16.77■□□□□ 0.28
SSH3-210ENST00000532881 BIN2Q9UBW5 565 aaPredicted RBP16.77■□□□□ 0.28
SSH3-210ENST00000532881 DLEC1Q9Y238 1755 aa16.77■□□□□ 0.28
SSH3-210ENST00000532881 COL5A3P25940 1745 aaPredicted RBP16.77■□□□□ 0.28
SSH3-210ENST00000532881 B4DLN1 442 aa16.77■□□□□ 0.27
SSH3-210ENST00000532881 LONP1P36776 959 aaKnown RBP16.77■□□□□ 0.27
SSH3-210ENST00000532881 ST5P78524 1137 aa16.77■□□□□ 0.27
SSH3-210ENST00000532881 GRM4Q14833 912 aa16.77■□□□□ 0.27
SSH3-210ENST00000532881 JAKMIP3Q5VZ66 844 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms