RNA–Protein interactions for RNA: ENST00000532656.6

CTSB-226, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-226ENST00000532656 CNPY2Q9Y2B0 182 aa20.53■□□□□ 0.88
CTSB-226ENST00000532656 TACC3Q9Y6A5 838 aa20.53■□□□□ 0.88
CTSB-226ENST00000532656 F5H6K3 240 aa20.52■□□□□ 0.88
CTSB-226ENST00000532656 PQBP1O60828 265 aaKnown RBP20.52■□□□□ 0.88
CTSB-226ENST00000532656 CLTBP09497 229 aa20.52■□□□□ 0.88
CTSB-226ENST00000532656 KLRC3Q07444 240 aa20.52■□□□□ 0.88
CTSB-226ENST00000532656 KBTBD3Q8NAB2 608 aa20.52■□□□□ 0.88
CTSB-226ENST00000532656 TEX13BQ9BXU2 312 aa20.52■□□□□ 0.88
CTSB-226ENST00000532656 CLIP2Q9UDT6 1046 aa20.52■□□□□ 0.88
CTSB-226ENST00000532656 RIPK3Q9Y572 518 aa20.52■□□□□ 0.88
CTSB-226ENST00000532656 MYH4Q9Y623 1939 aa20.51■□□□□ 0.87
CTSB-226ENST00000532656 ADAMTS4O75173 837 aa20.51■□□□□ 0.87
CTSB-226ENST00000532656 CPXCR1Q8N123 301 aa20.51■□□□□ 0.87
CTSB-226ENST00000532656 APPBP2Q92624 585 aa20.51■□□□□ 0.87
CTSB-226ENST00000532656 DDX11Q96FC9 970 aa20.51■□□□□ 0.87
CTSB-226ENST00000532656 CDX2Q99626 313 aaPredicted RBP20.51■□□□□ 0.87
CTSB-226ENST00000532656 SEMA6BQ9H3T3 888 aa20.51■□□□□ 0.87
CTSB-226ENST00000532656 EPB41L4AQ9HCS5 686 aaPredicted RBP20.51■□□□□ 0.87
CTSB-226ENST00000532656 SYNRGQ9UMZ2 1314 aa20.51■□□□□ 0.87
CTSB-226ENST00000532656 PRDM1O75626 825 aa20.5■□□□□ 0.87
CTSB-226ENST00000532656 TDO2P48775 406 aa20.5■□□□□ 0.87
CTSB-226ENST00000532656 SMAD3P84022 425 aaKnown RBP20.5■□□□□ 0.87
CTSB-226ENST00000532656 GIMAP6Q6P9H5 292 aa20.5■□□□□ 0.87
CTSB-226ENST00000532656 PRPF38AQ8NAV1 312 aaKnown RBP20.5■□□□□ 0.87
CTSB-226ENST00000532656 KIFC2Q96AC6 838 aa20.5■□□□□ 0.87
CTSB-226ENST00000532656 COL25A1Q9BXS0 654 aaPredicted RBP20.5■□□□□ 0.87
CTSB-226ENST00000532656 ZHX1Q9UKY1 873 aaPredicted RBP20.5■□□□□ 0.87
CTSB-226ENST00000532656 VCANP13611 3396 aa20.49■□□□□ 0.87
CTSB-226ENST00000532656 GPAA1O43292 621 aa20.49■□□□□ 0.87
CTSB-226ENST00000532656 SNAI1O95863 264 aaPredicted RBP20.49■□□□□ 0.87
CTSB-226ENST00000532656 RAG1P15918 1043 aa20.49■□□□□ 0.87
CTSB-226ENST00000532656 EPHB4P54760 987 aa20.49■□□□□ 0.87
CTSB-226ENST00000532656 RAVER2Q9HCJ3 691 aaKnown RBP20.49■□□□□ 0.87
CTSB-226ENST00000532656 FAM184BQ9ULE4 1060 aa20.49■□□□□ 0.87
CTSB-226ENST00000532656 CTDP1Q9Y5B0 961 aaPredicted RBP20.49■□□□□ 0.87
CTSB-226ENST00000532656 SYNGAP1Q96PV0 1343 aa20.49■□□□□ 0.87
CTSB-226ENST00000532656 DNAJC25-GNG10A0A024R161 153 aa20.48■□□□□ 0.87
CTSB-226ENST00000532656 IGKV6D-41A0A0C4DH26 115 aa20.48■□□□□ 0.87
CTSB-226ENST00000532656 KIAA0355O15063 1070 aa20.48■□□□□ 0.87
CTSB-226ENST00000532656 RNF113AO15541 343 aaKnown RBP20.48■□□□□ 0.87
CTSB-226ENST00000532656 ZBED4O75132 1171 aa20.48■□□□□ 0.87
CTSB-226ENST00000532656 APPP05067 770 aa20.48■□□□□ 0.87
CTSB-226ENST00000532656 ACLYP53396 1101 aa20.48■□□□□ 0.87
CTSB-226ENST00000532656 MSL3Q8N5Y2 521 aaKnown RBP20.48■□□□□ 0.87
CTSB-226ENST00000532656 GPATCH3Q96I76 525 aa20.48■□□□□ 0.87
CTSB-226ENST00000532656 RNPC3Q96LT9 517 aaKnown RBP20.48■□□□□ 0.87
CTSB-226ENST00000532656 TSEN34Q9BSV6 310 aaKnown RBP20.48■□□□□ 0.87
CTSB-226ENST00000532656 TTYH1Q9H313 450 aaPredicted RBP20.48■□□□□ 0.87
CTSB-226ENST00000532656 STARD7Q9NQZ5 370 aa20.48■□□□□ 0.87
CTSB-226ENST00000532656 TMEM39AQ9NV64 488 aa20.48■□□□□ 0.87
CTSB-226ENST00000532656 MYADML2A6NDP7 307 aa20.47■□□□□ 0.87
CTSB-226ENST00000532656 M0R2C6 588 aa20.47■□□□□ 0.87
CTSB-226ENST00000532656 IRX5P78411 483 aaPredicted RBP20.47■□□□□ 0.87
CTSB-226ENST00000532656 KCNA10Q16322 511 aa20.47■□□□□ 0.87
CTSB-226ENST00000532656 MAMDC4Q6UXC1 1216 aa20.47■□□□□ 0.87
CTSB-226ENST00000532656 ZNF444Q8N0Y2 327 aaPredicted RBP20.47■□□□□ 0.87
CTSB-226ENST00000532656 LRRC47Q8N1G4 583 aaKnown RBP20.47■□□□□ 0.87
CTSB-226ENST00000532656 MAFAQ8NHW3 353 aaPredicted RBP20.47■□□□□ 0.87
CTSB-226ENST00000532656 NUP133Q8WUM0 1156 aa20.47■□□□□ 0.87
CTSB-226ENST00000532656 MYLIPQ8WY64 445 aa20.47■□□□□ 0.87
CTSB-226ENST00000532656 CEP95Q96GE4 821 aa20.47■□□□□ 0.87
CTSB-226ENST00000532656 PRUNE2Q8WUY3 3088 aa20.47■□□□□ 0.87
CTSB-226ENST00000532656 ATP2A1O14983 1001 aa20.46■□□□□ 0.87
CTSB-226ENST00000532656 ZFYP08048 801 aaPredicted RBP20.46■□□□□ 0.87
CTSB-226ENST00000532656 FPGSQ05932 587 aa20.46■□□□□ 0.87
CTSB-226ENST00000532656 FAAP100Q0VG06 881 aa20.46■□□□□ 0.87
CTSB-226ENST00000532656 ANKRD33Q7Z3H0 272 aa20.46■□□□□ 0.87
CTSB-226ENST00000532656 KLHDC9Q8NEP7 349 aa20.46■□□□□ 0.87
CTSB-226ENST00000532656 SLC38A10Q9HBR0 1119 aa20.46■□□□□ 0.87
CTSB-226ENST00000532656 MTMR4Q9NYA4 1195 aa20.46■□□□□ 0.87
CTSB-226ENST00000532656 MCM3APO60318 1980 aa20.46■□□□□ 0.87
CTSB-226ENST00000532656 MOXD2PA6NHM9 499 aa20.45■□□□□ 0.86
CTSB-226ENST00000532656 DCDC2CA8MYV0 355 aa20.45■□□□□ 0.86
CTSB-226ENST00000532656 ADCY6O43306 1168 aa20.45■□□□□ 0.86
CTSB-226ENST00000532656 GNAT2P19087 354 aa20.45■□□□□ 0.86
CTSB-226ENST00000532656 ACVR2BQ13705 512 aa20.45■□□□□ 0.86
CTSB-226ENST00000532656 CCSAPQ6IQ19 270 aaPredicted RBP20.45■□□□□ 0.86
CTSB-226ENST00000532656 ZNF467Q7Z7K2 595 aaPredicted RBP20.45■□□□□ 0.86
CTSB-226ENST00000532656 ANKRD35Q8N283 1001 aa20.45■□□□□ 0.86
CTSB-226ENST00000532656 MKL1Q969V6 931 aa20.45■□□□□ 0.86
CTSB-226ENST00000532656 FGD4Q96M96 766 aa20.45■□□□□ 0.86
CTSB-226ENST00000532656 DCTPP1Q9H773 170 aa20.45■□□□□ 0.86
CTSB-226ENST00000532656 ZNF287Q9HBT7 754 aa20.45■□□□□ 0.86
CTSB-226ENST00000532656 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.45■□□□□ 0.86
CTSB-226ENST00000532656 FEM1BQ9UK73 627 aa20.45■□□□□ 0.86
CTSB-226ENST00000532656 DUSP11O75319 330 aaKnown RBP20.44■□□□□ 0.86
CTSB-226ENST00000532656 TTLL1O95922 423 aa20.44■□□□□ 0.86
CTSB-226ENST00000532656 C6orf222P0C671 652 aaPredicted RBP20.44■□□□□ 0.86
CTSB-226ENST00000532656 IFNL3Q8IZI9 196 aa20.44■□□□□ 0.86
CTSB-226ENST00000532656 TOX2Q96NM4 488 aa20.44■□□□□ 0.86
CTSB-226ENST00000532656 SEC62Q99442 399 aaKnown RBP20.44■□□□□ 0.86
CTSB-226ENST00000532656 HOMER2Q9NSB8 354 aa20.44■□□□□ 0.86
CTSB-226ENST00000532656 ISY1Q9ULR0 285 aaKnown RBP20.44■□□□□ 0.86
CTSB-226ENST00000532656 PATL2C9JE40 543 aaKnown RBP20.43■□□□□ 0.86
CTSB-226ENST00000532656 CCDC144BQ3MJ40 725 aa20.43■□□□□ 0.86
CTSB-226ENST00000532656 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.43■□□□□ 0.86
CTSB-226ENST00000532656 CHST13Q8NET6 341 aa20.43■□□□□ 0.86
CTSB-226ENST00000532656 CHMP4CQ96CF2 233 aa20.43■□□□□ 0.86
CTSB-226ENST00000532656 FBXO40Q9UH90 709 aa20.43■□□□□ 0.86
CTSB-226ENST00000532656 ASGR1P07306 291 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms