RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 PCDHB13Q9Y5F0 798 aa16.36■□□□□ 0.21
PCDHA9-202ENST00000532602 SEMA3EO15041 775 aa16.35■□□□□ 0.21
PCDHA9-202ENST00000532602 GNA14O95837 355 aa16.35■□□□□ 0.21
PCDHA9-202ENST00000532602 IVLP07476 585 aa16.35■□□□□ 0.21
PCDHA9-202ENST00000532602 USP17L8P0C7I0 530 aa16.35■□□□□ 0.21
PCDHA9-202ENST00000532602 CYP2J2P51589 502 aa16.35■□□□□ 0.21
PCDHA9-202ENST00000532602 TBC1D10BQ4KMP7 808 aaPredicted RBP16.35■□□□□ 0.21
PCDHA9-202ENST00000532602 CLIC6Q96NY7 704 aa16.35■□□□□ 0.21
PCDHA9-202ENST00000532602 GMNNO75496 209 aa16.35■□□□□ 0.21
PCDHA9-202ENST00000532602 MYCP01106 439 aaPredicted RBP16.35■□□□□ 0.21
PCDHA9-202ENST00000532602 FANCCQ00597 558 aa16.35■□□□□ 0.21
PCDHA9-202ENST00000532602 DALRD3Q5D0E6 543 aaKnown RBP16.35■□□□□ 0.21
PCDHA9-202ENST00000532602 GALNT17Q6IS24 598 aa16.35■□□□□ 0.21
PCDHA9-202ENST00000532602 IPO4Q8TEX9 1081 aaKnown RBP16.35■□□□□ 0.21
PCDHA9-202ENST00000532602 PUS7LQ9H0K6 701 aaKnown RBP16.35■□□□□ 0.21
PCDHA9-202ENST00000532602 ATG3Q9NT62 314 aa16.35■□□□□ 0.21
PCDHA9-202ENST00000532602 SCRN1Q12765 414 aa16.35■□□□□ 0.21
PCDHA9-202ENST00000532602 CCDC110Q8TBZ0 833 aa16.35■□□□□ 0.21
PCDHA9-202ENST00000532602 ADPGKQ9BRR6 497 aa16.35■□□□□ 0.21
PCDHA9-202ENST00000532602 CCNA1P78396 465 aa16.35■□□□□ 0.21
PCDHA9-202ENST00000532602 TBC1D31Q96DN5 1066 aa16.35■□□□□ 0.21
PCDHA9-202ENST00000532602 USTQ9Y2C2 406 aa16.35■□□□□ 0.21
PCDHA9-202ENST00000532602 COBLO75128 1261 aa16.35■□□□□ 0.21
PCDHA9-202ENST00000532602 ARHGAP44Q17R89 818 aa16.35■□□□□ 0.21
PCDHA9-202ENST00000532602 CCDC17Q96LX7 622 aa16.35■□□□□ 0.21
PCDHA9-202ENST00000532602 KCNK9Q9NPC2 374 aa16.35■□□□□ 0.21
PCDHA9-202ENST00000532602 CDK12Q9NYV4 1490 aaPredicted RBP16.34■□□□□ 0.21
PCDHA9-202ENST00000532602 ZBTB7AO95365 584 aa16.34■□□□□ 0.21
PCDHA9-202ENST00000532602 KRT26Q7Z3Y9 468 aa16.34■□□□□ 0.21
PCDHA9-202ENST00000532602 RASGRP4Q8TDF6 673 aa16.34■□□□□ 0.21
PCDHA9-202ENST00000532602 ZNF274Q96GC6 653 aaPredicted RBP16.34■□□□□ 0.21
PCDHA9-202ENST00000532602 PPP1R21Q6ZMI0 780 aa16.34■□□□□ 0.21
PCDHA9-202ENST00000532602 QRICH2Q9H0J4 1663 aa16.34■□□□□ 0.21
PCDHA9-202ENST00000532602 SCG2P13521 617 aa16.34■□□□□ 0.21
PCDHA9-202ENST00000532602 TNNI1P19237 187 aa16.34■□□□□ 0.21
PCDHA9-202ENST00000532602 BIRC2Q13490 618 aa16.34■□□□□ 0.21
PCDHA9-202ENST00000532602 SLFNL1Q499Z3 407 aa16.34■□□□□ 0.21
PCDHA9-202ENST00000532602 SLFN12Q8IYM2 578 aa16.34■□□□□ 0.21
PCDHA9-202ENST00000532602 GOLGA5Q8TBA6 731 aa16.34■□□□□ 0.21
PCDHA9-202ENST00000532602 ANO3Q9BYT9 981 aa16.34■□□□□ 0.21
PCDHA9-202ENST00000532602 GIPC1O14908 333 aa16.34■□□□□ 0.21
PCDHA9-202ENST00000532602 SETDB1Q15047 1291 aa16.34■□□□□ 0.21
PCDHA9-202ENST00000532602 LSG1Q9H089 658 aaKnown RBP16.34■□□□□ 0.21
PCDHA9-202ENST00000532602 ZSWIM6Q9HCJ5 1215 aa16.34■□□□□ 0.21
PCDHA9-202ENST00000532602 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.34■□□□□ 0.21
PCDHA9-202ENST00000532602 CRCPO75575 148 aa16.34■□□□□ 0.21
PCDHA9-202ENST00000532602 TBC1D9BQ66K14 1250 aa16.34■□□□□ 0.21
PCDHA9-202ENST00000532602 CLIC4Q9Y696 253 aa16.33■□□□□ 0.21
PCDHA9-202ENST00000532602 GEN1Q17RS7 908 aa16.33■□□□□ 0.21
PCDHA9-202ENST00000532602 XKR9Q5GH70 373 aa16.33■□□□□ 0.21
PCDHA9-202ENST00000532602 TMTC1Q8IUR5 882 aa16.33■□□□□ 0.21
PCDHA9-202ENST00000532602 NOSTRINQ8IVI9 506 aa16.33■□□□□ 0.21
PCDHA9-202ENST00000532602 CHAMP1Q96JM3 812 aa16.33■□□□□ 0.21
PCDHA9-202ENST00000532602 SUGCTQ9HAC7 445 aa16.33■□□□□ 0.21
PCDHA9-202ENST00000532602 KCNQ2O43526 872 aa16.33■□□□□ 0.2
PCDHA9-202ENST00000532602 CPLX4Q7Z7G2 160 aa16.33■□□□□ 0.2
PCDHA9-202ENST00000532602 SYCE1Q8N0S2 351 aa16.33■□□□□ 0.2
PCDHA9-202ENST00000532602 TRERF1Q96PN7 1200 aa16.33■□□□□ 0.2
PCDHA9-202ENST00000532602 CD2APQ9Y5K6 639 aa16.33■□□□□ 0.2
PCDHA9-202ENST00000532602 BBOX1O75936 387 aa16.33■□□□□ 0.2
PCDHA9-202ENST00000532602 ADD2P35612 726 aa16.33■□□□□ 0.2
PCDHA9-202ENST00000532602 MECOMQ03112 1051 aa16.33■□□□□ 0.2
PCDHA9-202ENST00000532602 ZMYM1Q5SVZ6 1142 aa16.33■□□□□ 0.2
PCDHA9-202ENST00000532602 CROCCP2Q86T23 111 aa16.33■□□□□ 0.2
PCDHA9-202ENST00000532602 PCDHA12Q9UN75 941 aa16.33■□□□□ 0.2
PCDHA9-202ENST00000532602 PALM3A6NDB9 673 aaPredicted RBP16.33■□□□□ 0.2
PCDHA9-202ENST00000532602 BTBD18B2RXH4 712 aa16.33■□□□□ 0.2
PCDHA9-202ENST00000532602 FOSP01100 380 aaPredicted RBP16.33■□□□□ 0.2
PCDHA9-202ENST00000532602 ATF7P17544 494 aaPredicted RBP16.33■□□□□ 0.2
PCDHA9-202ENST00000532602 TMOD1P28289 359 aa16.33■□□□□ 0.2
PCDHA9-202ENST00000532602 UBE3CQ15386 1083 aa16.33■□□□□ 0.2
PCDHA9-202ENST00000532602 SNAP23O00161 211 aa16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 PDIA3P30101 505 aaKnown RBP16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 CACNB3P54284 484 aa16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 PLA2G4DQ86XP0 818 aa16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 NAPGQ99747 312 aaPredicted RBP16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 CCDC94Q9BW85 323 aaPredicted RBP16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 SAMD15Q9P1V8 674 aa16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 PFKFB2O60825 505 aa16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 PTPN12Q05209 780 aaKnown RBP16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 MAIP1Q8WWC4 291 aa16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 ATP10DQ9P241 1426 aa16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 CYP4A11Q02928 519 aa16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 KLHL30Q0D2K2 578 aa16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 GRAPQ13588 217 aa16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 CCDC93Q567U6 631 aa16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 SEPT14Q6ZU15 432 aa16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 GRAPLQ8TC17 118 aaPredicted RBP16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 MRRFQ96E11 262 aaKnown RBP16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 PFKFB1P16118 471 aa16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 KMT5BQ4FZB7 885 aa16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 TICAM2Q86XR7 235 aa16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 PIH1D3Q9NQM4 214 aaKnown RBP16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 MYO1AQ9UBC5 1043 aa16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 FAM184BQ9ULE4 1060 aa16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 PCDHA1Q9Y5I3 950 aa16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 ERVV-1B6SEH8 477 aa16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 MYSM1Q5VVJ2 828 aa16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 TAOK1Q7L7X3 1001 aa16.32■□□□□ 0.2
PCDHA9-202ENST00000532602 MAGEA1P43355 309 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms