RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 TFDP1Q14186 410 aa12.56□□□□□ -0.4
PTPRK-221ENST00000532331 CDC37L1Q7L3B6 337 aa12.56□□□□□ -0.4
PTPRK-221ENST00000532331 NEK8Q86SG6 692 aa12.56□□□□□ -0.4
PTPRK-221ENST00000532331 LINC00116Q8NCU8 138 aa12.56□□□□□ -0.4
PTPRK-221ENST00000532331 GUCA1BQ9UMX6 200 aa12.56□□□□□ -0.4
PTPRK-221ENST00000532331 PLCB3Q01970 1234 aa12.55□□□□□ -0.4
PTPRK-221ENST00000532331 ZNF274Q96GC6 653 aaPredicted RBP12.55□□□□□ -0.4
PTPRK-221ENST00000532331 JPH2Q9BR39 696 aaPredicted RBP12.55□□□□□ -0.4
PTPRK-221ENST00000532331 IQCGQ9H095 443 aaKnown RBP12.55□□□□□ -0.4
PTPRK-221ENST00000532331 CTNND2Q9UQB3 1225 aa12.55□□□□□ -0.4
PTPRK-221ENST00000532331 ZKSCAN5Q9Y2L8 839 aa12.55□□□□□ -0.4
PTPRK-221ENST00000532331 USP17L5A8MUK1 530 aa12.55□□□□□ -0.4
PTPRK-221ENST00000532331 HSPA4P34932 840 aa12.55□□□□□ -0.4
PTPRK-221ENST00000532331 TUBB4BP68371 445 aa12.55□□□□□ -0.4
PTPRK-221ENST00000532331 RETREG2Q8NC44 543 aa12.55□□□□□ -0.4
PTPRK-221ENST00000532331 PROCA1Q8NCQ7 364 aaPredicted RBP12.55□□□□□ -0.4
PTPRK-221ENST00000532331 HOXC10Q9NYD6 342 aa12.55□□□□□ -0.4
PTPRK-221ENST00000532331 TBC1D7Q9P0N9 293 aa12.55□□□□□ -0.4
PTPRK-221ENST00000532331 PIK3C2BO00750 1634 aa12.55□□□□□ -0.4
PTPRK-221ENST00000532331 TRPM1Q7Z4N2 1603 aa12.55□□□□□ -0.4
PTPRK-221ENST00000532331 IQSEC2Q5JU85 1478 aa12.55□□□□□ -0.4
PTPRK-221ENST00000532331 PI16Q6UXB8 463 aa12.55□□□□□ -0.4
PTPRK-221ENST00000532331 NOC4LQ9BVI4 516 aaKnown RBP12.55□□□□□ -0.4
PTPRK-221ENST00000532331 LAMC1P11047 1609 aa12.55□□□□□ -0.4
PTPRK-221ENST00000532331 ZMYM6O95789 1325 aa12.55□□□□□ -0.4
PTPRK-221ENST00000532331 RPS6KC1Q96S38 1066 aa12.55□□□□□ -0.4
PTPRK-221ENST00000532331 ZNF215Q9UL58 517 aaPredicted RBP12.55□□□□□ -0.4
PTPRK-221ENST00000532331 SETD1BQ9UPS6 1966 aaKnown RBP12.55□□□□□ -0.4
PTPRK-221ENST00000532331 GH2P01242 217 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 SLC16A2P36021 539 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 SMIM5Q71RC9 77 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 MICALL2Q8IY33 904 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 OTUD5Q96G74 571 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 ANTXR1Q9H6X2 564 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 CROCC2H7BZ55 1655 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 LIG4P49917 911 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 Q3C1V9 767 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 TM6SF1Q9BZW5 370 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 TSGA10Q9BZW7 698 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 RTEL1Q9NZ71 1219 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 ATP6V0A2Q9Y487 856 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 PPRC1Q5VV67 1664 aaKnown RBP12.54□□□□□ -0.4
PTPRK-221ENST00000532331 INF2Q27J81 1249 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 MIS18BP1Q6P0N0 1132 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 EEPD1Q7L9B9 569 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 ATP6V0A1Q93050 837 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 DYNLL2Q96FJ2 89 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 AKT3Q9Y243 479 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 AKR1B15C9JRZ8 316 aaPredicted RBP12.54□□□□□ -0.4
PTPRK-221ENST00000532331 M0R2C6 588 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 POLR2DO15514 142 aaKnown RBP12.54□□□□□ -0.4
PTPRK-221ENST00000532331 PRKAB2O43741 272 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 ATF7P17544 494 aaPredicted RBP12.54□□□□□ -0.4
PTPRK-221ENST00000532331 KMT5BQ4FZB7 885 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 PRR5LQ6MZQ0 368 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 STMN4Q9H169 189 aaPredicted RBP12.54□□□□□ -0.4
PTPRK-221ENST00000532331 CNOT7Q9UIV1 285 aaKnown RBP12.54□□□□□ -0.4
PTPRK-221ENST00000532331 SLU7O95391 586 aaKnown RBP12.54□□□□□ -0.4
PTPRK-221ENST00000532331 TNNI1P19237 187 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 CDK8P49336 464 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 UBXN2AP68543 259 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 VWA3BQ502W6 1294 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 TMED8Q6PL24 325 aaPredicted RBP12.54□□□□□ -0.4
PTPRK-221ENST00000532331 MAK16Q9BXY0 300 aaKnown RBP12.54□□□□□ -0.4
PTPRK-221ENST00000532331 ANO3Q9BYT9 981 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 LZTFL1Q9NQ48 299 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 INO80Q9ULG1 1556 aaPredicted RBP12.54□□□□□ -0.4
PTPRK-221ENST00000532331 RABGAP1Q9Y3P9 1069 aa12.54□□□□□ -0.4
PTPRK-221ENST00000532331 DPEP1P16444 411 aa12.53□□□□□ -0.4
PTPRK-221ENST00000532331 KARSQ15046 597 aaKnown RBP12.53□□□□□ -0.4
PTPRK-221ENST00000532331 ZC3H13Q5T200 1668 aaKnown RBP12.53□□□□□ -0.4
PTPRK-221ENST00000532331 OPA1O60313 960 aa12.53□□□□□ -0.4
PTPRK-221ENST00000532331 TBC1D8BQ0IIM8 1120 aa12.53□□□□□ -0.4
PTPRK-221ENST00000532331 ZNF569Q5MCW4 686 aa12.53□□□□□ -0.4
PTPRK-221ENST00000532331 PCDHB13Q9Y5F0 798 aa12.53□□□□□ -0.4
PTPRK-221ENST00000532331 PTH1RQ03431 593 aa12.53□□□□□ -0.4
PTPRK-221ENST00000532331 TRIM14Q14142 442 aa12.53□□□□□ -0.4
PTPRK-221ENST00000532331 SH3RF3Q8TEJ3 882 aaPredicted RBP12.53□□□□□ -0.4
PTPRK-221ENST00000532331 TMEM106CQ9BVX2 250 aa12.53□□□□□ -0.4
PTPRK-221ENST00000532331 FBXO40Q9UH90 709 aa12.53□□□□□ -0.4
PTPRK-221ENST00000532331 CD2APQ9Y5K6 639 aa12.53□□□□□ -0.4
PTPRK-221ENST00000532331 TECPR2O15040 1411 aa12.53□□□□□ -0.4
PTPRK-221ENST00000532331 ADAMTS13Q76LX8 1427 aa12.53□□□□□ -0.4
PTPRK-221ENST00000532331 KRT9P35527 623 aa12.53□□□□□ -0.4
PTPRK-221ENST00000532331 ZNF577Q9BSK1 485 aa12.53□□□□□ -0.4
PTPRK-221ENST00000532331 MTFR1LQ9H019 292 aa12.53□□□□□ -0.4
PTPRK-221ENST00000532331 SEPT9Q9UHD8 586 aaPredicted RBP12.53□□□□□ -0.4
PTPRK-221ENST00000532331 E9PCH4 1651 aa12.53□□□□□ -0.4
PTPRK-221ENST00000532331 LRRIQ4A6NIV6 560 aa12.52□□□□□ -0.4
PTPRK-221ENST00000532331 ZSCAN20P17040 1043 aaPredicted RBP12.52□□□□□ -0.4
PTPRK-221ENST00000532331 YWHAEP62258 255 aaKnown RBP12.52□□□□□ -0.4
PTPRK-221ENST00000532331 GPBP1Q86WP2 473 aa12.52□□□□□ -0.4
PTPRK-221ENST00000532331 ISCA1Q9BUE6 129 aa12.52□□□□□ -0.4
PTPRK-221ENST00000532331 DIP2AQ14689 1571 aa12.52□□□□□ -0.4
PTPRK-221ENST00000532331 CD19P15391 556 aa12.52□□□□□ -0.4
PTPRK-221ENST00000532331 TECP42680 631 aa12.52□□□□□ -0.4
PTPRK-221ENST00000532331 EXOC8Q8IYI6 725 aa12.52□□□□□ -0.4
PTPRK-221ENST00000532331 PIH1D3Q9NQM4 214 aaKnown RBP12.52□□□□□ -0.4
PTPRK-221ENST00000532331 CALCOCO1Q9P1Z2 691 aa12.52□□□□□ -0.4
PTPRK-221ENST00000532331 GTF2F1P35269 517 aaKnown RBP eCLIP12.52□□□□□ -0.411e-7■■■■■ 27.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms