RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 CRACR2BQ8N4Y2 399 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 GTF3C2Q8WUA4 911 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 SPACA7Q96KW9 195 aa6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 FSD1Q9BTV5 496 aa6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 ZSWIM4Q9H7M6 989 aa6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 ARMT1Q9H993 441 aa6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 RNF186Q9NXI6 227 aa6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 HERC5Q9UII4 1024 aaKnown RBP6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 NOD1Q9Y239 953 aa6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 SALL3Q9BXA9 1300 aa6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 MYH2Q9UKX2 1941 aa6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 ARHGAP33O14559 1287 aa6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 TPD52L2O43399 206 aaKnown RBP6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 ALDH1A1P00352 501 aa6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 POLR3DP05423 398 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 P4HBP07237 508 aaKnown RBP6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 SLURP2P0DP57 97 aa6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 HSPA8P11142 646 aaKnown RBP6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 CETPP11597 493 aa6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 GTF2A2P52657 109 aa6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 SEC13P55735 322 aa6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 ARHGAP4P98171 946 aa6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 RBL2Q08999 1139 aa6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 PPIL2Q13356 520 aa6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 SNAPC2Q13487 334 aa6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 SLC4A8Q2Y0W8 1093 aa6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 OTUD7BQ6GQQ9 843 aa6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 SDR42E1Q8WUS8 393 aa6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 APPBP2Q92624 585 aa6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 EVI5LQ96CN4 794 aa6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 RBCK1Q9BYM8 510 aa6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 PUS7LQ9H0K6 701 aaKnown RBP6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 PRDM10Q9NQV6 1147 aa6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 MCM9Q9NXL9 1143 aa6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 MAGEC2Q9UBF1 373 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 SLC4A4Q9Y6R1 1079 aa6.91□□□□□ -1.3
HMGB1P42-201ENST00000532126 CCL15-CCL14A0A0B4J2E2 113 aa6.9□□□□□ -1.3
HMGB1P42-201ENST00000532126 IGF2BP3O00425 579 aaKnown RBP eCLIP6.9□□□□□ -1.3
HMGB1P42-201ENST00000532126 PRKAB2O43741 272 aa6.9□□□□□ -1.3
HMGB1P42-201ENST00000532126 SORBS3O60504 671 aa6.9□□□□□ -1.3
HMGB1P42-201ENST00000532126 PRPF40AO75400 957 aaKnown RBP6.9□□□□□ -1.3
HMGB1P42-201ENST00000532126 TBC1D8O95759 1140 aa6.9□□□□□ -1.3
HMGB1P42-201ENST00000532126 PTPRAP18433 802 aa6.9□□□□□ -1.3
HMGB1P42-201ENST00000532126 ZNF76P36508 570 aa6.9□□□□□ -1.3
HMGB1P42-201ENST00000532126 CAP2P40123 477 aa6.9□□□□□ -1.3
HMGB1P42-201ENST00000532126 OCLNQ16625 522 aa6.9□□□□□ -1.3
HMGB1P42-201ENST00000532126 CCL15Q16663 113 aa6.9□□□□□ -1.3
HMGB1P42-201ENST00000532126 PUS10Q3MIT2 529 aaKnown RBP6.9□□□□□ -1.3
HMGB1P42-201ENST00000532126 AMOTL1Q8IY63 956 aa6.9□□□□□ -1.3
HMGB1P42-201ENST00000532126 SIX5Q8N196 739 aa6.9□□□□□ -1.3
HMGB1P42-201ENST00000532126 BRI3BPQ8WY22 251 aa6.9□□□□□ -1.3
HMGB1P42-201ENST00000532126 OSBP2Q969R2 916 aa6.9□□□□□ -1.3
HMGB1P42-201ENST00000532126 STRBPQ96SI9 672 aaKnown RBP6.9□□□□□ -1.3
HMGB1P42-201ENST00000532126 EHD4Q9H223 541 aa6.9□□□□□ -1.3
HMGB1P42-201ENST00000532126 DCP1AQ9NPI6 582 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P42-201ENST00000532126 ATP8A2Q9NTI2 1148 aa6.9□□□□□ -1.3
HMGB1P42-201ENST00000532126 FKBPLQ9UIM3 349 aa6.9□□□□□ -1.3
HMGB1P42-201ENST00000532126 SERPINB13Q9UIV8 391 aa6.9□□□□□ -1.3
HMGB1P42-201ENST00000532126 SLC27A5Q9Y2P5 690 aa6.9□□□□□ -1.3
HMGB1P42-201ENST00000532126 ZHX2Q9Y6X8 837 aa6.9□□□□□ -1.3
HMGB1P42-201ENST00000532126 CXCL11O14625 94 aa6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 NDUFB5O43674 189 aa6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 ACTN4O43707 911 aaKnown RBP6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 FAM13AO94988 1023 aa6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 APPP05067 770 aa6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 NEFLP07196 543 aa6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 CENPBP07199 599 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 ASNSP08243 561 aa6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 CYP2D6P10635 497 aa6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 GNAT2P19087 354 aa6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 HSD3B2P26439 372 aa6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 DNAJA1P31689 397 aaKnown RBP6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 PLCD1P51178 756 aa6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 FANCCQ00597 558 aa6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 ARID5AQ03989 594 aa6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 RRP1BQ14684 758 aaKnown RBP6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 ZMYM1Q5SVZ6 1142 aa6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 COL13A1Q5TAT6 717 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 LAPTM4BQ86VI4 370 aa6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 RILPL2Q969X0 211 aa6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 CITED4Q96RK1 184 aa6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 PTPN18Q99952 460 aa6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 OSBPL3Q9H4L5 887 aa6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 DNAJC18Q9H819 358 aa6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 KCNH4Q9UQ05 1017 aa6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 DOCK2Q92608 1830 aa6.89□□□□□ -1.31
HMGB1P42-201ENST00000532126 TRIM75PA6NK02 468 aa6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 BTBD19C9JJ37 291 aa6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 M0R2C6 588 aa6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 GPAA1O43292 621 aa6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 GDF11O95390 407 aa6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 TDO2P48775 406 aa6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 CLDN10P78369 228 aa6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 ATP2B2Q01814 1243 aa6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 SPP2Q13103 211 aa6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 CRHR2Q13324 411 aa6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 CERKLQ49MI3 558 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 DMRTA1Q5VZB9 504 aa6.88□□□□□ -1.31
HMGB1P42-201ENST00000532126 TATDN1Q6P1N9 297 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms