RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 CD247P20963 164 aa4.23□□□□□ -1.73
CD44-234ENST00000531873 STAT3P40763 770 aa4.23□□□□□ -1.73
CD44-234ENST00000531873 AUHQ13825 339 aaKnown RBP4.23□□□□□ -1.73
CD44-234ENST00000531873 ANKRD39Q53RE8 183 aa4.23□□□□□ -1.73
CD44-234ENST00000531873 TAF7LQ5H9L4 462 aa4.23□□□□□ -1.73
CD44-234ENST00000531873 LETMD1Q6P1Q0 360 aa4.23□□□□□ -1.73
CD44-234ENST00000531873 SEZ6L2Q6UXD5 910 aa4.23□□□□□ -1.73
CD44-234ENST00000531873 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.23□□□□□ -1.73
CD44-234ENST00000531873 C7orf61Q8IZ16 206 aa4.23□□□□□ -1.73
CD44-234ENST00000531873 LRRN4CLQ8ND94 238 aa4.23□□□□□ -1.73
CD44-234ENST00000531873 RNF141Q8WVD5 230 aa4.23□□□□□ -1.73
CD44-234ENST00000531873 EZH1Q92800 747 aaPredicted RBP4.23□□□□□ -1.73
CD44-234ENST00000531873 OSBP2Q969R2 916 aa4.23□□□□□ -1.73
CD44-234ENST00000531873 FAM46AQ96IP4 442 aaKnown RBP4.23□□□□□ -1.73
CD44-234ENST00000531873 MRGPRX3Q96LB0 322 aa4.23□□□□□ -1.73
CD44-234ENST00000531873 UBL7Q96S82 380 aaPredicted RBP4.23□□□□□ -1.73
CD44-234ENST00000531873 APBA2Q99767 749 aa4.23□□□□□ -1.73
CD44-234ENST00000531873 MIPEPQ99797 713 aa4.23□□□□□ -1.73
CD44-234ENST00000531873 GP6Q9HCN6 339 aa4.23□□□□□ -1.73
CD44-234ENST00000531873 WHRNQ9P202 907 aa4.23□□□□□ -1.73
CD44-234ENST00000531873 CEP131Q9UPN4 1083 aa4.23□□□□□ -1.73
CD44-234ENST00000531873 DAGLAQ9Y4D2 1042 aa4.23□□□□□ -1.73
CD44-234ENST00000531873 GSG1L2A8MUP6 293 aa4.22□□□□□ -1.73
CD44-234ENST00000531873 DHX15O43143 795 aaKnown RBP4.22□□□□□ -1.73
CD44-234ENST00000531873 PABPC1P11940 636 aaKnown RBP4.22□□□□□ -1.73
CD44-234ENST00000531873 CDKN1CP49918 316 aaPredicted RBP4.22□□□□□ -1.73
CD44-234ENST00000531873 RNF4P78317 190 aa4.22□□□□□ -1.73
CD44-234ENST00000531873 SNW1Q13573 536 aaKnown RBP4.22□□□□□ -1.73
CD44-234ENST00000531873 HSP90AA2PQ14568 343 aaPredicted RBP4.22□□□□□ -1.73
CD44-234ENST00000531873 PLEKHG6Q3KR16 790 aa4.22□□□□□ -1.73
CD44-234ENST00000531873 FNDC3BQ53EP0 1204 aaKnown RBP4.22□□□□□ -1.73
CD44-234ENST00000531873 SGO2Q562F6 1265 aa4.22□□□□□ -1.73
CD44-234ENST00000531873 TRIM61Q5EBN2 209 aa4.22□□□□□ -1.73
CD44-234ENST00000531873 RNF43Q68DV7 783 aa4.22□□□□□ -1.73
CD44-234ENST00000531873 RNF180Q86T96 592 aa4.22□□□□□ -1.73
CD44-234ENST00000531873 CDH24Q86UP0 819 aa4.22□□□□□ -1.73
CD44-234ENST00000531873 JAMLQ86YT9 394 aa4.22□□□□□ -1.73
CD44-234ENST00000531873 TRIM59Q8IWR1 403 aa4.22□□□□□ -1.73
CD44-234ENST00000531873 BVESQ8NE79 360 aa4.22□□□□□ -1.73
CD44-234ENST00000531873 ADCY4Q8NFM4 1077 aa4.22□□□□□ -1.73
CD44-234ENST00000531873 FBXL18Q96ME1 805 aa4.22□□□□□ -1.73
CD44-234ENST00000531873 DBNDD2Q9BQY9 259 aa4.22□□□□□ -1.73
CD44-234ENST00000531873 MRPL4Q9BYD3 311 aaKnown RBP4.22□□□□□ -1.73
CD44-234ENST00000531873 GBP3Q9H0R5 595 aa4.22□□□□□ -1.73
CD44-234ENST00000531873 SSU72Q9NP77 194 aaKnown RBP4.22□□□□□ -1.73
CD44-234ENST00000531873 DDX56Q9NY93 547 aaKnown RBP4.22□□□□□ -1.73
CD44-234ENST00000531873 CGGBP1Q9UFW8 167 aaPredicted RBP4.22□□□□□ -1.73
CD44-234ENST00000531873 EMC9Q9Y3B6 208 aa4.22□□□□□ -1.73
CD44-234ENST00000531873 CNTNAP4Q9C0A0 1308 aa4.21□□□□□ -1.73
CD44-234ENST00000531873 PRODHO43272 600 aa4.21□□□□□ -1.74
CD44-234ENST00000531873 PDE8AO60658 829 aa4.21□□□□□ -1.74
CD44-234ENST00000531873 NFICP08651 508 aa4.21□□□□□ -1.74
CD44-234ENST00000531873 MYCLP1P12525 358 aaPredicted RBP4.21□□□□□ -1.74
CD44-234ENST00000531873 ITGA4P13612 1032 aa4.21□□□□□ -1.74
CD44-234ENST00000531873 GLB1P16278 677 aa4.21□□□□□ -1.74
CD44-234ENST00000531873 SDSP20132 328 aa4.21□□□□□ -1.74
CD44-234ENST00000531873 ZNF445P59923 1031 aa4.21□□□□□ -1.74
CD44-234ENST00000531873 SUMO1P63165 101 aaKnown RBP4.21□□□□□ -1.74
CD44-234ENST00000531873 CDK5R2Q13319 367 aa4.21□□□□□ -1.74
CD44-234ENST00000531873 SF1Q15637 639 aaKnown RBP4.21□□□□□ -1.74
CD44-234ENST00000531873 NBPF9Q3BBW0 867 aa4.21□□□□□ -1.74
CD44-234ENST00000531873 CBLL1Q75N03 491 aa4.21□□□□□ -1.74
CD44-234ENST00000531873 ARMC10Q8N2F6 343 aa4.21□□□□□ -1.74
CD44-234ENST00000531873 ARHGEF39Q8N4T4 335 aa4.21□□□□□ -1.74
CD44-234ENST00000531873 FBLIM1Q8WUP2 373 aa4.21□□□□□ -1.74
CD44-234ENST00000531873 BTN2A2Q8WVV5 523 aa4.21□□□□□ -1.74
CD44-234ENST00000531873 PPP1R14AQ96A00 147 aa4.21□□□□□ -1.74
CD44-234ENST00000531873 C1orf159Q96HA4 380 aa4.21□□□□□ -1.74
CD44-234ENST00000531873 RCC1LQ96I51 464 aaKnown RBP4.21□□□□□ -1.74
CD44-234ENST00000531873 CDC6Q99741 560 aa4.21□□□□□ -1.74
CD44-234ENST00000531873 IER2Q9BTL4 223 aa4.21□□□□□ -1.74
CD44-234ENST00000531873 ASPNQ9BXN1 380 aa4.21□□□□□ -1.74
CD44-234ENST00000531873 IRF2BPLQ9H1B7 796 aa4.21□□□□□ -1.74
CD44-234ENST00000531873 LGR6Q9HBX8 967 aa4.21□□□□□ -1.74
CD44-234ENST00000531873 CWC22Q9HCG8 908 aaKnown RBP4.21□□□□□ -1.74
CD44-234ENST00000531873 TRIM39Q9HCM9 518 aa4.21□□□□□ -1.74
CD44-234ENST00000531873 LRP2BPQ9P2M1 347 aa4.21□□□□□ -1.74
CD44-234ENST00000531873 SUGT1Q9Y2Z0 365 aa4.21□□□□□ -1.74
CD44-234ENST00000531873 DNAJC25-GNG10A0A024R161 153 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 GAS2O43903 313 aaKnown RBP4.2□□□□□ -1.74
CD44-234ENST00000531873 MARCH6O60337 910 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 DLX3O60479 287 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 LRRN2O75325 713 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 PPM1BO75688 479 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 DNAJC8O75937 253 aaPredicted RBP4.2□□□□□ -1.74
CD44-234ENST00000531873 EOMESO95936 686 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 ETV3P41162 512 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 CYP4F3Q08477 520 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 NTRK3Q16288 839 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 UVSSAQ2YD98 709 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 FBLN7Q53RD9 439 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 NSMFQ6X4W1 530 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 ADAT2Q7Z6V5 191 aaKnown RBP4.2□□□□□ -1.74
CD44-234ENST00000531873 SCUBE1Q8IWY4 988 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 ABI1Q8IZP0 508 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 PRPF38AQ8NAV1 312 aaKnown RBP4.2□□□□□ -1.74
CD44-234ENST00000531873 GSTCDQ8NEC7 633 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 SLC7A14Q8TBB6 771 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 CHAC2Q8WUX2 184 aa4.2□□□□□ -1.74
CD44-234ENST00000531873 BRF1Q92994 677 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms