RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 SMARCA5O60264 1052 aaPredicted RBP20.77■□□□□ 0.92
PKP3-208ENST00000531857 SNAI1O95863 264 aaPredicted RBP20.77■□□□□ 0.92
PKP3-208ENST00000531857 RAG1P15918 1043 aa20.77■□□□□ 0.92
PKP3-208ENST00000531857 RASA1P20936 1047 aa20.77■□□□□ 0.92
PKP3-208ENST00000531857 COPB2P35606 906 aa20.77■□□□□ 0.92
PKP3-208ENST00000531857 ACLYP53396 1101 aa20.77■□□□□ 0.92
PKP3-208ENST00000531857 FAAP100Q0VG06 881 aa20.77■□□□□ 0.92
PKP3-208ENST00000531857 STRBPQ96SI9 672 aaKnown RBP20.77■□□□□ 0.92
PKP3-208ENST00000531857 SLF1Q9BQI6 1058 aa20.77■□□□□ 0.92
PKP3-208ENST00000531857 ARPP21Q9UBL0 812 aaPredicted RBP20.77■□□□□ 0.92
PKP3-208ENST00000531857 CNPY2Q9Y2B0 182 aa20.77■□□□□ 0.92
PKP3-208ENST00000531857 SYNRGQ9UMZ2 1314 aa20.77■□□□□ 0.91
PKP3-208ENST00000531857 IRX5P78411 483 aaPredicted RBP20.76■□□□□ 0.91
PKP3-208ENST00000531857 SNRNP48Q6IEG0 339 aaKnown RBP20.76■□□□□ 0.91
PKP3-208ENST00000531857 TEX13BQ9BXU2 312 aa20.76■□□□□ 0.91
PKP3-208ENST00000531857 TMEM39AQ9NV64 488 aa20.76■□□□□ 0.91
PKP3-208ENST00000531857 DNAJC25-GNG10A0A024R161 153 aa20.75■□□□□ 0.91
PKP3-208ENST00000531857 GSG1L2A8MUP6 293 aa20.75■□□□□ 0.91
PKP3-208ENST00000531857 F5H6K3 240 aa20.75■□□□□ 0.91
PKP3-208ENST00000531857 NDUFB10O96000 172 aa20.75■□□□□ 0.91
PKP3-208ENST00000531857 SLC4A3P48751 1232 aa20.75■□□□□ 0.91
PKP3-208ENST00000531857 FPGSQ05932 587 aa20.75■□□□□ 0.91
PKP3-208ENST00000531857 KLRC3Q07444 240 aa20.75■□□□□ 0.91
PKP3-208ENST00000531857 CCSAPQ6IQ19 270 aaPredicted RBP20.75■□□□□ 0.91
PKP3-208ENST00000531857 ZSCAN25Q6NSZ9 544 aa20.75■□□□□ 0.91
PKP3-208ENST00000531857 ANKRD33Q7Z3H0 272 aa20.75■□□□□ 0.91
PKP3-208ENST00000531857 KLHDC9Q8NEP7 349 aa20.75■□□□□ 0.91
PKP3-208ENST00000531857 TSEN34Q9BSV6 310 aaKnown RBP20.75■□□□□ 0.91
PKP3-208ENST00000531857 MYADML2A6NDP7 307 aa20.74■□□□□ 0.91
PKP3-208ENST00000531857 FOSL2P15408 326 aa20.74■□□□□ 0.91
PKP3-208ENST00000531857 KCNA10Q16322 511 aa20.74■□□□□ 0.91
PKP3-208ENST00000531857 SBK1Q52WX2 424 aa20.74■□□□□ 0.91
PKP3-208ENST00000531857 MAMDC4Q6UXC1 1216 aa20.74■□□□□ 0.91
PKP3-208ENST00000531857 CPXCR1Q8N123 301 aa20.74■□□□□ 0.91
PKP3-208ENST00000531857 MSL3Q8N5Y2 521 aaKnown RBP20.74■□□□□ 0.91
PKP3-208ENST00000531857 DDX11Q96FC9 970 aa20.74■□□□□ 0.91
PKP3-208ENST00000531857 TOX2Q96NM4 488 aa20.74■□□□□ 0.91
PKP3-208ENST00000531857 LRRCC1Q9C099 1032 aa20.74■□□□□ 0.91
PKP3-208ENST00000531857 STARD7Q9NQZ5 370 aa20.74■□□□□ 0.91
PKP3-208ENST00000531857 NYAP2Q9P242 653 aa20.74■□□□□ 0.91
PKP3-208ENST00000531857 FAM184BQ9ULE4 1060 aa20.74■□□□□ 0.91
PKP3-208ENST00000531857 SYNGAP1Q96PV0 1343 aa20.74■□□□□ 0.91
PKP3-208ENST00000531857 MINDY4BA8MYZ0 360 aa20.73■□□□□ 0.91
PKP3-208ENST00000531857 ADCY6O43306 1168 aa20.73■□□□□ 0.91
PKP3-208ENST00000531857 PRPF38AQ8NAV1 312 aaKnown RBP20.73■□□□□ 0.91
PKP3-208ENST00000531857 MKNK2Q9HBH9 465 aa20.73■□□□□ 0.91
PKP3-208ENST00000531857 ZHX1Q9UKY1 873 aaPredicted RBP20.73■□□□□ 0.91
PKP3-208ENST00000531857 SPTBN5Q9NRC6 3674 aaKnown RBP20.73■□□□□ 0.91
PKP3-208ENST00000531857 DCDC2CA8MYV0 355 aa20.72■□□□□ 0.91
PKP3-208ENST00000531857 NUP133Q8WUM0 1156 aa20.72■□□□□ 0.91
PKP3-208ENST00000531857 OSBP2Q969R2 916 aa20.72■□□□□ 0.91
PKP3-208ENST00000531857 FGD4Q96M96 766 aa20.72■□□□□ 0.91
PKP3-208ENST00000531857 CLIP2Q9UDT6 1046 aa20.72■□□□□ 0.91
PKP3-208ENST00000531857 GBF1Q92538 1859 aa20.71■□□□□ 0.91
PKP3-208ENST00000531857 IGKV6D-41A0A0C4DH26 115 aa20.71■□□□□ 0.91
PKP3-208ENST00000531857 MOXD2PA6NHM9 499 aa20.71■□□□□ 0.91
PKP3-208ENST00000531857 ATP2A1O14983 1001 aa20.71■□□□□ 0.91
PKP3-208ENST00000531857 DUSP11O75319 330 aaKnown RBP20.71■□□□□ 0.91
PKP3-208ENST00000531857 GRIN2CQ14957 1233 aa20.71■□□□□ 0.91
PKP3-208ENST00000531857 KIFC2Q96AC6 838 aa20.71■□□□□ 0.91
PKP3-208ENST00000531857 RAVER2Q9HCJ3 691 aaKnown RBP20.71■□□□□ 0.91
PKP3-208ENST00000531857 TBX21Q9UL17 535 aa20.71■□□□□ 0.91
PKP3-208ENST00000531857 TMEM265A0A087WTH1 108 aa20.7■□□□□ 0.9
PKP3-208ENST00000531857 PRDM1O75626 825 aa20.7■□□□□ 0.9
PKP3-208ENST00000531857 TIMP1P01033 207 aa20.7■□□□□ 0.9
PKP3-208ENST00000531857 DNAJB2P25686 324 aa20.7■□□□□ 0.9
PKP3-208ENST00000531857 ACVR2BQ13705 512 aa20.7■□□□□ 0.9
PKP3-208ENST00000531857 GIMAP6Q6P9H5 292 aa20.7■□□□□ 0.9
PKP3-208ENST00000531857 ZNF467Q7Z7K2 595 aaPredicted RBP20.7■□□□□ 0.9
PKP3-208ENST00000531857 SLC38A10Q9HBR0 1119 aa20.7■□□□□ 0.9
PKP3-208ENST00000531857 EPB41L4AQ9HCS5 686 aaPredicted RBP20.7■□□□□ 0.9
PKP3-208ENST00000531857 ECHDC1Q9NTX5 307 aa20.7■□□□□ 0.9
PKP3-208ENST00000531857 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.7■□□□□ 0.9
PKP3-208ENST00000531857 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.69■□□□□ 0.9
PKP3-208ENST00000531857 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.69■□□□□ 0.9
PKP3-208ENST00000531857 ZBED4O75132 1171 aa20.69■□□□□ 0.9
PKP3-208ENST00000531857 C6orf222P0C671 652 aaPredicted RBP20.69■□□□□ 0.9
PKP3-208ENST00000531857 CST5P28325 142 aaPredicted RBP20.69■□□□□ 0.9
PKP3-208ENST00000531857 CDK7P50613 346 aa20.69■□□□□ 0.9
PKP3-208ENST00000531857 CCDC144BQ3MJ40 725 aa20.69■□□□□ 0.9
PKP3-208ENST00000531857 TSHZ3Q63HK5 1081 aa20.69■□□□□ 0.9
PKP3-208ENST00000531857 C16orf59Q7L2K0 433 aa20.69■□□□□ 0.9
PKP3-208ENST00000531857 KBTBD3Q8NAB2 608 aa20.69■□□□□ 0.9
PKP3-208ENST00000531857 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.69■□□□□ 0.9
PKP3-208ENST00000531857 MYO9BQ13459 2157 aa20.68■□□□□ 0.9
PKP3-208ENST00000531857 ASGR1P07306 291 aa20.68■□□□□ 0.9
PKP3-208ENST00000531857 C20orf194Q5TEA3 1177 aa20.68■□□□□ 0.9
PKP3-208ENST00000531857 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.68■□□□□ 0.97e-7■■■■□ 23
PKP3-208ENST00000531857 ANKRD35Q8N283 1001 aa20.68■□□□□ 0.9
PKP3-208ENST00000531857 USP38Q8NB14 1042 aa20.68■□□□□ 0.9
PKP3-208ENST00000531857 APPBP2Q92624 585 aa20.68■□□□□ 0.9
PKP3-208ENST00000531857 MKL1Q969V6 931 aa20.68■□□□□ 0.9
PKP3-208ENST00000531857 CEP95Q96GE4 821 aa20.68■□□□□ 0.9
PKP3-208ENST00000531857 GLT1D1Q96MS3 346 aa20.68■□□□□ 0.9
PKP3-208ENST00000531857 CHMP4BQ9H444 224 aaKnown RBP20.68■□□□□ 0.9
PKP3-208ENST00000531857 ELP1O95163 1332 aa20.68■□□□□ 0.9
PKP3-208ENST00000531857 LRRC37A2A6NM11 1700 aa20.67■□□□□ 0.9
PKP3-208ENST00000531857 M0R2C6 588 aa20.67■□□□□ 0.9
PKP3-208ENST00000531857 RNF113AO15541 343 aaKnown RBP20.67■□□□□ 0.9
PKP3-208ENST00000531857 GPAA1O43292 621 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms