RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 UHRF1Q96T88 793 aaPredicted RBP10.87□□□□□ -0.67
USF1-210ENST00000531842 DNAJC2Q99543 621 aaKnown RBP10.87□□□□□ -0.67
USF1-210ENST00000531842 CRNKL1Q9BZJ0 848 aaKnown RBP10.87□□□□□ -0.67
USF1-210ENST00000531842 THEGQ9P2T0 379 aa10.87□□□□□ -0.67
USF1-210ENST00000531842 ZHX1Q9UKY1 873 aaPredicted RBP10.87□□□□□ -0.67
USF1-210ENST00000531842 TMX2Q9Y320 296 aa10.87□□□□□ -0.67
USF1-210ENST00000531842 LCTP09848 1927 aa10.86□□□□□ -0.67
USF1-210ENST00000531842 DCDC2CA8MYV0 355 aa10.86□□□□□ -0.67
USF1-210ENST00000531842 RFXAPO00287 272 aa10.86□□□□□ -0.67
USF1-210ENST00000531842 GOLIM4O00461 696 aa10.86□□□□□ -0.67
USF1-210ENST00000531842 VWA5AO00534 786 aa10.86□□□□□ -0.67
USF1-210ENST00000531842 AKR1A1P14550 325 aa10.86□□□□□ -0.67
USF1-210ENST00000531842 STAT3P40763 770 aa10.86□□□□□ -0.67
USF1-210ENST00000531842 BEX3Q00994 111 aa10.86□□□□□ -0.67
USF1-210ENST00000531842 RASIP1Q5U651 963 aa10.86□□□□□ -0.67
USF1-210ENST00000531842 MFSD5Q6N075 450 aa10.86□□□□□ -0.67
USF1-210ENST00000531842 TMEM179Q6ZVK1 233 aa10.86□□□□□ -0.67
USF1-210ENST00000531842 RIOX2Q8IUF8 465 aa10.86□□□□□ -0.67
USF1-210ENST00000531842 ABRAQ8N0Z2 381 aa10.86□□□□□ -0.67
USF1-210ENST00000531842 MB21D1Q8N884 522 aa10.86□□□□□ -0.67
USF1-210ENST00000531842 KLHDC9Q8NEP7 349 aa10.86□□□□□ -0.67
USF1-210ENST00000531842 VTI1AQ96AJ9 217 aa10.86□□□□□ -0.67
USF1-210ENST00000531842 CHMP4CQ96CF2 233 aa10.86□□□□□ -0.67
USF1-210ENST00000531842 FGD4Q96M96 766 aa10.86□□□□□ -0.67
USF1-210ENST00000531842 GAS2L1Q99501 681 aaPredicted RBP10.86□□□□□ -0.67
USF1-210ENST00000531842 SLC5A4Q9NY91 659 aa10.86□□□□□ -0.67
USF1-210ENST00000531842 ZNF214Q9UL59 606 aaPredicted RBP10.86□□□□□ -0.67
USF1-210ENST00000531842 NOP58Q9Y2X3 529 aaKnown RBP10.86□□□□□ -0.67
USF1-210ENST00000531842 BRWD1Q9NSI6 2320 aa10.86□□□□□ -0.67
USF1-210ENST00000531842 LRRC37A2A6NM11 1700 aa10.86□□□□□ -0.67
USF1-210ENST00000531842 MBD4O95243 580 aa10.85□□□□□ -0.67
USF1-210ENST00000531842 ASGR1P07306 291 aa10.85□□□□□ -0.67
USF1-210ENST00000531842 C6orf222P0C671 652 aaPredicted RBP10.85□□□□□ -0.67
USF1-210ENST00000531842 CDK8P49336 464 aa10.85□□□□□ -0.67
USF1-210ENST00000531842 CDK7P50613 346 aa10.85□□□□□ -0.67
USF1-210ENST00000531842 KCNQ1P51787 676 aa10.85□□□□□ -0.67
USF1-210ENST00000531842 KCTD2Q14681 263 aa10.85□□□□□ -0.67
USF1-210ENST00000531842 TMEM63BQ5T3F8 832 aa10.85□□□□□ -0.67
USF1-210ENST00000531842 KRT40Q6A162 431 aa10.85□□□□□ -0.67
USF1-210ENST00000531842 PPP1R13LQ8WUF5 828 aa10.85□□□□□ -0.67
USF1-210ENST00000531842 ARHGEF10LQ9HCE6 1279 aa10.85□□□□□ -0.67
USF1-210ENST00000531842 ADAMTS5Q9UNA0 930 aa10.85□□□□□ -0.67
USF1-210ENST00000531842 PTPRSQ13332 1948 aa10.85□□□□□ -0.67
USF1-210ENST00000531842 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.84□□□□□ -0.67
USF1-210ENST00000531842 USP17L12C9JPN9 530 aa10.84□□□□□ -0.67
USF1-210ENST00000531842 USP17L21D6R901 530 aa10.84□□□□□ -0.67
USF1-210ENST00000531842 WDR46O15213 610 aaKnown RBP10.84□□□□□ -0.67
USF1-210ENST00000531842 CTAGE5O15320 804 aa10.84□□□□□ -0.67
USF1-210ENST00000531842 SLC25A27O95847 323 aa10.84□□□□□ -0.67
USF1-210ENST00000531842 PLA2G5P39877 138 aa10.84□□□□□ -0.67
USF1-210ENST00000531842 CCL23P55773 120 aa10.84□□□□□ -0.67
USF1-210ENST00000531842 SNRNP48Q6IEG0 339 aaKnown RBP10.84□□□□□ -0.67
USF1-210ENST00000531842 OTOP2Q7RTS6 562 aa10.84□□□□□ -0.67
USF1-210ENST00000531842 CPXCR1Q8N123 301 aa10.84□□□□□ -0.67
USF1-210ENST00000531842 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.84□□□□□ -0.67
USF1-210ENST00000531842 CERS4Q9HA82 394 aa10.84□□□□□ -0.67
USF1-210ENST00000531842 PPP1R9AQ9ULJ8 1098 aa10.84□□□□□ -0.67
USF1-210ENST00000531842 CNPY2Q9Y2B0 182 aa10.84□□□□□ -0.67
USF1-210ENST00000531842 ROBO3Q96MS0 1386 aa10.84□□□□□ -0.67
USF1-210ENST00000531842 TET1Q8NFU7 2136 aa10.84□□□□□ -0.67
USF1-210ENST00000531842 ASTN1O14525 1302 aa10.84□□□□□ -0.67
USF1-210ENST00000531842 IPO8O15397 1037 aaKnown RBP10.83□□□□□ -0.68
USF1-210ENST00000531842 MRPS5P82675 430 aaKnown RBP10.83□□□□□ -0.68
USF1-210ENST00000531842 PPIGQ13427 754 aaKnown RBP eCLIP10.83□□□□□ -0.683e-6■■■■□ 19.3
USF1-210ENST00000531842 CCDC144BQ3MJ40 725 aa10.83□□□□□ -0.68
USF1-210ENST00000531842 CEP85Q6P2H3 762 aa10.83□□□□□ -0.68
USF1-210ENST00000531842 SPRED2Q7Z698 418 aa10.83□□□□□ -0.68
USF1-210ENST00000531842 ITPRIPQ8IWB1 547 aa10.83□□□□□ -0.68
USF1-210ENST00000531842 FAM126BQ8IXS8 530 aa10.83□□□□□ -0.68
USF1-210ENST00000531842 ATXN2LQ8WWM7 1075 aaKnown RBP10.83□□□□□ -0.68
USF1-210ENST00000531842 KHSRPQ92945 711 aaKnown RBP eCLIP10.83□□□□□ -0.68
USF1-210ENST00000531842 VWCEQ96DN2 955 aa10.83□□□□□ -0.68
USF1-210ENST00000531842 TOX2Q96NM4 488 aa10.83□□□□□ -0.68
USF1-210ENST00000531842 TSEN34Q9BSV6 310 aaKnown RBP10.83□□□□□ -0.68
USF1-210ENST00000531842 EPHX3Q9H6B9 360 aa10.83□□□□□ -0.68
USF1-210ENST00000531842 RAVER2Q9HCJ3 691 aaKnown RBP10.83□□□□□ -0.68
USF1-210ENST00000531842 FAM184BQ9ULE4 1060 aa10.83□□□□□ -0.68
USF1-210ENST00000531842 COL4A4P53420 1690 aaPredicted RBP10.82□□□□□ -0.68
USF1-210ENST00000531842 DNAJC25-GNG10A0A024R161 153 aa10.82□□□□□ -0.68
USF1-210ENST00000531842 EPOPA6NHQ4 379 aa10.82□□□□□ -0.68
USF1-210ENST00000531842 ARVCFO00192 962 aa10.82□□□□□ -0.68
USF1-210ENST00000531842 ARHGEF15O94989 841 aa10.82□□□□□ -0.68
USF1-210ENST00000531842 PSMC6P62333 389 aa10.82□□□□□ -0.68
USF1-210ENST00000531842 CNTN2Q02246 1040 aa10.82□□□□□ -0.68
USF1-210ENST00000531842 ACVR2BQ13705 512 aa10.82□□□□□ -0.68
USF1-210ENST00000531842 AKNAD1Q5T1N1 836 aa10.82□□□□□ -0.68
USF1-210ENST00000531842 C12orf60Q5U649 245 aa10.82□□□□□ -0.68
USF1-210ENST00000531842 ZKSCAN2Q63HK3 967 aa10.82□□□□□ -0.68
USF1-210ENST00000531842 CXCL17Q6UXB2 119 aa10.82□□□□□ -0.68
USF1-210ENST00000531842 NUP133Q8WUM0 1156 aa10.82□□□□□ -0.68
USF1-210ENST00000531842 FAM122AQ96E09 287 aa10.82□□□□□ -0.68
USF1-210ENST00000531842 DDX11Q96FC9 970 aa10.82□□□□□ -0.68
USF1-210ENST00000531842 SCLYQ96I15 445 aa10.82□□□□□ -0.68
USF1-210ENST00000531842 GLT1D1Q96MS3 346 aa10.82□□□□□ -0.68
USF1-210ENST00000531842 TRPV6Q9H1D0 765 aa10.82□□□□□ -0.68
USF1-210ENST00000531842 HOMER2Q9NSB8 354 aa10.82□□□□□ -0.68
USF1-210ENST00000531842 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.82□□□□□ -0.68
USF1-210ENST00000531842 DIS3Q9Y2L1 958 aaKnown RBP10.82□□□□□ -0.68
USF1-210ENST00000531842 TRIP12Q14669 1992 aaPredicted RBP10.82□□□□□ -0.68
USF1-210ENST00000531842 GRIN2DO15399 1336 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms