RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 AMIGO3Q86WK7 504 aa19.04■□□□□ 0.64
VPS26B-206ENST00000531741 ZNF444Q8N0Y2 327 aaPredicted RBP19.04■□□□□ 0.64
VPS26B-206ENST00000531741 ANKRD20A12PQ8NF67 263 aa19.04■□□□□ 0.64
VPS26B-206ENST00000531741 STAMQ92783 540 aa19.04■□□□□ 0.64
VPS26B-206ENST00000531741 GPKOWQ92917 476 aaPredicted RBP eCLIP19.04■□□□□ 0.64
VPS26B-206ENST00000531741 CCSER1Q9C0I3 900 aa19.04■□□□□ 0.64
VPS26B-206ENST00000531741 PCDHA6Q9UN73 950 aa19.04■□□□□ 0.64
VPS26B-206ENST00000531741 JAG2Q9Y219 1238 aa19.04■□□□□ 0.64
VPS26B-206ENST00000531741 PCDHA8Q9Y5H6 950 aa19.04■□□□□ 0.64
VPS26B-206ENST00000531741 MRFAP1Q9Y605 127 aa19.04■□□□□ 0.64
VPS26B-206ENST00000531741 ADGRG1Q9Y653 693 aa19.04■□□□□ 0.64
VPS26B-206ENST00000531741 STXBP3O00186 592 aa19.03■□□□□ 0.64
VPS26B-206ENST00000531741 STAT6P42226 847 aa19.03■□□□□ 0.64
VPS26B-206ENST00000531741 SLC35G1Q2M3R5 365 aa19.03■□□□□ 0.64
VPS26B-206ENST00000531741 RASGRP2Q7LDG7 609 aa19.03■□□□□ 0.64
VPS26B-206ENST00000531741 FNBP4Q8N3X1 1017 aaPredicted RBP19.03■□□□□ 0.64
VPS26B-206ENST00000531741 SPZ1Q9BXG8 430 aa19.03■□□□□ 0.64
VPS26B-206ENST00000531741 ZNF446Q9NWS9 450 aa19.03■□□□□ 0.64
VPS26B-206ENST00000531741 PRDM4Q9UKN5 801 aa19.03■□□□□ 0.64
VPS26B-206ENST00000531741 CDK5RAP2Q96SN8 1893 aa19.03■□□□□ 0.64
VPS26B-206ENST00000531741 SOWAHDA6NJG2 315 aa19.02■□□□□ 0.64
VPS26B-206ENST00000531741 CYTH3O43739 400 aa19.02■□□□□ 0.64
VPS26B-206ENST00000531741 GYPCP04921 128 aa19.02■□□□□ 0.64
VPS26B-206ENST00000531741 NELFBQ8WX92 580 aa19.02■□□□□ 0.64
VPS26B-206ENST00000531741 NGLY1Q96IV0 654 aa19.02■□□□□ 0.64
VPS26B-206ENST00000531741 RTFDC1Q9BY42 306 aaPredicted RBP19.02■□□□□ 0.64
VPS26B-206ENST00000531741 ARGLU1Q9NWB6 273 aaPredicted RBP19.02■□□□□ 0.64
VPS26B-206ENST00000531741 USP17L3A6NCW0 530 aa19.02■□□□□ 0.63
VPS26B-206ENST00000531741 USP17L4A6NCW7 530 aa19.02■□□□□ 0.63
VPS26B-206ENST00000531741 H7C1D1 291 aa19.02■□□□□ 0.63
VPS26B-206ENST00000531741 RASA1P20936 1047 aa19.02■□□□□ 0.63
VPS26B-206ENST00000531741 RFC4P35249 363 aa19.02■□□□□ 0.63
VPS26B-206ENST00000531741 BMS1Q14692 1282 aaKnown RBP19.02■□□□□ 0.63
VPS26B-206ENST00000531741 TCP11X2Q5H9J9 407 aa19.02■□□□□ 0.63
VPS26B-206ENST00000531741 RAD9BQ6WBX8 426 aa19.02■□□□□ 0.63
VPS26B-206ENST00000531741 USP17L1Q7RTZ2 530 aa19.02■□□□□ 0.63
VPS26B-206ENST00000531741 TMEM47Q9BQJ4 181 aa19.02■□□□□ 0.63
VPS26B-206ENST00000531741 CARD6Q9BX69 1037 aa19.02■□□□□ 0.63
VPS26B-206ENST00000531741 MRPL44Q9H9J2 332 aaKnown RBP19.02■□□□□ 0.63
VPS26B-206ENST00000531741 MAGEF1Q9HAY2 307 aa19.02■□□□□ 0.63
VPS26B-206ENST00000531741 NPHP1O15259 732 aa19.01■□□□□ 0.63
VPS26B-206ENST00000531741 TOM1O60784 492 aa19.01■□□□□ 0.63
VPS26B-206ENST00000531741 SMARCA1P28370 1054 aa19.01■□□□□ 0.63
VPS26B-206ENST00000531741 CLCN6P51797 869 aa19.01■□□□□ 0.63
VPS26B-206ENST00000531741 COPB1P53618 953 aaKnown RBP19.01■□□□□ 0.63
VPS26B-206ENST00000531741 MTF1Q14872 753 aa19.01■□□□□ 0.63
VPS26B-206ENST00000531741 DIXDC1Q155Q3 683 aa19.01■□□□□ 0.63
VPS26B-206ENST00000531741 NAALADL2Q58DX5 795 aa19.01■□□□□ 0.63
VPS26B-206ENST00000531741 TRAPPC3LQ5T215 181 aa19.01■□□□□ 0.63
VPS26B-206ENST00000531741 TMTC1Q8IUR5 882 aa19.01■□□□□ 0.63
VPS26B-206ENST00000531741 TGFBRAP1Q8WUH2 860 aa19.01■□□□□ 0.63
VPS26B-206ENST00000531741 DESI2Q9BSY9 194 aa19.01■□□□□ 0.63
VPS26B-206ENST00000531741 ZMYND12Q9H0C1 365 aa19.01■□□□□ 0.63
VPS26B-206ENST00000531741 CUEDC2Q9H467 287 aa19.01■□□□□ 0.63
VPS26B-206ENST00000531741 N4BP3O15049 544 aa19.01■□□□□ 0.63
VPS26B-206ENST00000531741 CASP14P31944 242 aa19.01■□□□□ 0.63
VPS26B-206ENST00000531741 NFIXQ14938 502 aa19.01■□□□□ 0.63
VPS26B-206ENST00000531741 KARSQ15046 597 aaKnown RBP19.01■□□□□ 0.63
VPS26B-206ENST00000531741 C16orf86Q6ZW13 317 aa19.01■□□□□ 0.63
VPS26B-206ENST00000531741 ADSSL1Q8N142 457 aa19.01■□□□□ 0.63
VPS26B-206ENST00000531741 CNBD1Q8NA66 436 aa19.01■□□□□ 0.63
VPS26B-206ENST00000531741 CCDC12Q8WUD4 166 aaPredicted RBP19.01■□□□□ 0.63
VPS26B-206ENST00000531741 AK8Q96MA6 479 aa19.01■□□□□ 0.63
VPS26B-206ENST00000531741 C8orf37Q96NL8 207 aa19.01■□□□□ 0.63
VPS26B-206ENST00000531741 KBTBD4Q9NVX7 518 aa19.01■□□□□ 0.63
VPS26B-206ENST00000531741 SNED1Q8TER0 1413 aa19■□□□□ 0.63
VPS26B-206ENST00000531741 GPR75-ASB3A0A0A6YYF3 556 aa19■□□□□ 0.63
VPS26B-206ENST00000531741 KCNJ18B7U540 433 aa19■□□□□ 0.63
VPS26B-206ENST00000531741 PLCG2P16885 1265 aa19■□□□□ 0.63
VPS26B-206ENST00000531741 PRCPP42785 496 aa19■□□□□ 0.63
VPS26B-206ENST00000531741 TUBB2AQ13885 445 aa19■□□□□ 0.63
VPS26B-206ENST00000531741 KCNJ12Q14500 433 aa19■□□□□ 0.63
VPS26B-206ENST00000531741 GRIK5Q16478 980 aa19■□□□□ 0.63
VPS26B-206ENST00000531741 CERKQ8TCT0 537 aa19■□□□□ 0.63
VPS26B-206ENST00000531741 RASGRP4Q8TDF6 673 aa19■□□□□ 0.63
VPS26B-206ENST00000531741 TUBB2BQ9BVA1 445 aa19■□□□□ 0.63
VPS26B-206ENST00000531741 IL1R1P14778 569 aa18.99■□□□□ 0.63
VPS26B-206ENST00000531741 FXR1P51114 621 aaKnown RBP eCLIP18.99■□□□□ 0.63
VPS26B-206ENST00000531741 SLC4A8Q2Y0W8 1093 aa18.99■□□□□ 0.63
VPS26B-206ENST00000531741 RSRC2Q7L4I2 434 aaKnown RBP18.99■□□□□ 0.63
VPS26B-206ENST00000531741 HEATR3Q7Z4Q2 680 aa18.99■□□□□ 0.63
VPS26B-206ENST00000531741 NEDD1Q8NHV4 660 aa18.99■□□□□ 0.63
VPS26B-206ENST00000531741 FAM163AQ96GL9 167 aaPredicted RBP18.99■□□□□ 0.63
VPS26B-206ENST00000531741 TMEM60Q9H2L4 133 aa18.99■□□□□ 0.63
VPS26B-206ENST00000531741 TTF2Q9UNY4 1162 aaKnown RBP18.99■□□□□ 0.63
VPS26B-206ENST00000531741 RHOBTB3O94955 611 aa18.99■□□□□ 0.63
VPS26B-206ENST00000531741 ADRA2BP18089 450 aa18.99■□□□□ 0.63
VPS26B-206ENST00000531741 CCT6AP40227 531 aaKnown RBP18.99■□□□□ 0.63
VPS26B-206ENST00000531741 NOVP48745 357 aa18.99■□□□□ 0.63
VPS26B-206ENST00000531741 PPP2R3AQ06190 1150 aa18.99■□□□□ 0.63
VPS26B-206ENST00000531741 KRT25Q7Z3Z0 450 aa18.99■□□□□ 0.63
VPS26B-206ENST00000531741 GPR161Q8N6U8 529 aaKnown RBP18.99■□□□□ 0.63
VPS26B-206ENST00000531741 ABHD10Q9NUJ1 306 aa18.99■□□□□ 0.63
VPS26B-206ENST00000531741 ATP8B1O43520 1251 aa18.98■□□□□ 0.63
VPS26B-206ENST00000531741 ZRANB2O95218 330 aaKnown RBP eCLIP18.98■□□□□ 0.63
VPS26B-206ENST00000531741 ATP2B4P23634 1241 aa18.98■□□□□ 0.63
VPS26B-206ENST00000531741 UBA7P41226 1012 aa18.98■□□□□ 0.63
VPS26B-206ENST00000531741 ORC2Q13416 577 aaPredicted RBP18.98■□□□□ 0.63
VPS26B-206ENST00000531741 INF2Q27J81 1249 aa18.98■□□□□ 0.63
VPS26B-206ENST00000531741 CRY2Q49AN0 593 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms