RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 TOX2Q96NM4 488 aa22.83■■□□□ 1.25
UBXN1-212ENST00000531625 BCL11AQ9H165 835 aa22.83■■□□□ 1.25
UBXN1-212ENST00000531625 ARPP21Q9UBL0 812 aaPredicted RBP22.83■■□□□ 1.25
UBXN1-212ENST00000531625 RAG1P15918 1043 aa22.82■■□□□ 1.24
UBXN1-212ENST00000531625 ANKRD33Q7Z3H0 272 aa22.82■■□□□ 1.24
UBXN1-212ENST00000531625 RNPC3Q96LT9 517 aaKnown RBP22.82■■□□□ 1.24
UBXN1-212ENST00000531625 SLF1Q9BQI6 1058 aa22.82■■□□□ 1.24
UBXN1-212ENST00000531625 TEX13BQ9BXU2 312 aa22.82■■□□□ 1.24
UBXN1-212ENST00000531625 PUS7LQ9H0K6 701 aaKnown RBP22.82■■□□□ 1.24
UBXN1-212ENST00000531625 SYNGAP1Q96PV0 1343 aa22.82■■□□□ 1.24
UBXN1-212ENST00000531625 GREB1LQ9C091 1923 aaPredicted RBP22.81■■□□□ 1.24
UBXN1-212ENST00000531625 PQBP1O60828 265 aaKnown RBP22.81■■□□□ 1.24
UBXN1-212ENST00000531625 EPHB4P54760 987 aa22.81■■□□□ 1.24
UBXN1-212ENST00000531625 SBK1Q52WX2 424 aa22.81■■□□□ 1.24
UBXN1-212ENST00000531625 MAMDC4Q6UXC1 1216 aa22.81■■□□□ 1.24
UBXN1-212ENST00000531625 EXOC6Q8TAG9 804 aa22.81■■□□□ 1.24
UBXN1-212ENST00000531625 MYLIPQ8WY64 445 aa22.81■■□□□ 1.24
UBXN1-212ENST00000531625 TMEM39AQ9NV64 488 aa22.81■■□□□ 1.24
UBXN1-212ENST00000531625 NYAP2Q9P242 653 aa22.81■■□□□ 1.24
UBXN1-212ENST00000531625 DNAJC25-GNG10A0A024R161 153 aa22.8■■□□□ 1.24
UBXN1-212ENST00000531625 RAD21O60216 631 aa22.8■■□□□ 1.24
UBXN1-212ENST00000531625 ACLYP53396 1101 aa22.8■■□□□ 1.24
UBXN1-212ENST00000531625 FPGSQ05932 587 aa22.8■■□□□ 1.24
UBXN1-212ENST00000531625 GIMAP6Q6P9H5 292 aa22.8■■□□□ 1.24
UBXN1-212ENST00000531625 KLHDC9Q8NEP7 349 aa22.8■■□□□ 1.24
UBXN1-212ENST00000531625 NUP133Q8WUM0 1156 aa22.8■■□□□ 1.24
UBXN1-212ENST00000531625 LENG1Q96BZ8 264 aaPredicted RBP22.8■■□□□ 1.24
UBXN1-212ENST00000531625 FAM184BQ9ULE4 1060 aa22.8■■□□□ 1.24
UBXN1-212ENST00000531625 MOXD2PA6NHM9 499 aa22.79■■□□□ 1.24
UBXN1-212ENST00000531625 DCDC2CA8MYV0 355 aa22.79■■□□□ 1.24
UBXN1-212ENST00000531625 ATP2A1O14983 1001 aa22.79■■□□□ 1.24
UBXN1-212ENST00000531625 SNAI1O95863 264 aaPredicted RBP22.79■■□□□ 1.24
UBXN1-212ENST00000531625 RASA1P20936 1047 aa22.79■■□□□ 1.24
UBXN1-212ENST00000531625 FAAP100Q0VG06 881 aa22.79■■□□□ 1.24
UBXN1-212ENST00000531625 SNRNP48Q6IEG0 339 aaKnown RBP22.79■■□□□ 1.24
UBXN1-212ENST00000531625 CCSAPQ6IQ19 270 aaPredicted RBP22.79■■□□□ 1.24
UBXN1-212ENST00000531625 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.79■■□□□ 1.24
UBXN1-212ENST00000531625 ZNF467Q7Z7K2 595 aaPredicted RBP22.79■■□□□ 1.24
UBXN1-212ENST00000531625 PRPF38AQ8NAV1 312 aaKnown RBP22.79■■□□□ 1.24
UBXN1-212ENST00000531625 STRBPQ96SI9 672 aaKnown RBP22.79■■□□□ 1.24
UBXN1-212ENST00000531625 STARD7Q9NQZ5 370 aa22.79■■□□□ 1.24
UBXN1-212ENST00000531625 SYNRGQ9UMZ2 1314 aa22.79■■□□□ 1.24
UBXN1-212ENST00000531625 F5H6K3 240 aa22.78■■□□□ 1.24
UBXN1-212ENST00000531625 FOSL2P15408 326 aa22.78■■□□□ 1.24
UBXN1-212ENST00000531625 KLRC3Q07444 240 aa22.78■■□□□ 1.24
UBXN1-212ENST00000531625 DDX11Q96FC9 970 aa22.78■■□□□ 1.24
UBXN1-212ENST00000531625 NUP88Q99567 741 aaPredicted RBP22.78■■□□□ 1.24
UBXN1-212ENST00000531625 RIPK3Q9Y572 518 aa22.78■■□□□ 1.24
UBXN1-212ENST00000531625 DUSP11O75319 330 aaKnown RBP22.77■■□□□ 1.24
UBXN1-212ENST00000531625 NDUFB10O96000 172 aa22.77■■□□□ 1.24
UBXN1-212ENST00000531625 LRRCC1Q9C099 1032 aa22.77■■□□□ 1.24
UBXN1-212ENST00000531625 MKNK2Q9HBH9 465 aa22.77■■□□□ 1.24
UBXN1-212ENST00000531625 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.76■■□□□ 1.23
UBXN1-212ENST00000531625 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.76■■□□□ 1.23
UBXN1-212ENST00000531625 GSG1L2A8MUP6 293 aa22.76■■□□□ 1.23
UBXN1-212ENST00000531625 CST5P28325 142 aaPredicted RBP22.76■■□□□ 1.23
UBXN1-212ENST00000531625 KCNA10Q16322 511 aa22.76■■□□□ 1.23
UBXN1-212ENST00000531625 TBX21Q9UL17 535 aa22.76■■□□□ 1.23
UBXN1-212ENST00000531625 ELP1O95163 1332 aa22.76■■□□□ 1.23
UBXN1-212ENST00000531625 MYO9BQ13459 2157 aa22.75■■□□□ 1.23
UBXN1-212ENST00000531625 ZBED4O75132 1171 aa22.75■■□□□ 1.23
UBXN1-212ENST00000531625 TIMP1P01033 207 aa22.75■■□□□ 1.23
UBXN1-212ENST00000531625 ZHX1Q9UKY1 873 aaPredicted RBP22.75■■□□□ 1.23
UBXN1-212ENST00000531625 SYNPO2Q9UMS6 1093 aa22.75■■□□□ 1.23
UBXN1-212ENST00000531625 MROH7Q68CQ1 1323 aa22.75■■□□□ 1.23
UBXN1-212ENST00000531625 IGKV6D-41A0A0C4DH26 115 aa22.74■■□□□ 1.23
UBXN1-212ENST00000531625 CDK7P50613 346 aa22.74■■□□□ 1.23
UBXN1-212ENST00000531625 ACVR2BQ13705 512 aa22.74■■□□□ 1.23
UBXN1-212ENST00000531625 PCSK9Q8NBP7 692 aaKnown RBP22.74■■□□□ 1.23
UBXN1-212ENST00000531625 MKL1Q969V6 931 aa22.74■■□□□ 1.23
UBXN1-212ENST00000531625 GLT1D1Q96MS3 346 aa22.74■■□□□ 1.23
UBXN1-212ENST00000531625 SLC38A10Q9HBR0 1119 aa22.74■■□□□ 1.23
UBXN1-212ENST00000531625 ECHDC1Q9NTX5 307 aa22.74■■□□□ 1.23
UBXN1-212ENST00000531625 FBXO40Q9UH90 709 aa22.74■■□□□ 1.23
UBXN1-212ENST00000531625 DNAJB2P25686 324 aa22.73■■□□□ 1.23
UBXN1-212ENST00000531625 AAMPQ13685 434 aa22.73■■□□□ 1.23
UBXN1-212ENST00000531625 MFSD5Q6N075 450 aa22.73■■□□□ 1.23
UBXN1-212ENST00000531625 CPXCR1Q8N123 301 aa22.73■■□□□ 1.23
UBXN1-212ENST00000531625 KBTBD3Q8NAB2 608 aa22.73■■□□□ 1.23
UBXN1-212ENST00000531625 UPF3AQ9H1J1 476 aaKnown RBP22.73■■□□□ 1.23
UBXN1-212ENST00000531625 ABHD16BQ9H3Z7 469 aa22.73■■□□□ 1.23
UBXN1-212ENST00000531625 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.73■■□□□ 1.23
UBXN1-212ENST00000531625 CLIP2Q9UDT6 1046 aa22.73■■□□□ 1.23
UBXN1-212ENST00000531625 PCDHB15Q9Y5E8 787 aa22.73■■□□□ 1.23
UBXN1-212ENST00000531625 MYADML2A6NDP7 307 aa22.72■■□□□ 1.23
UBXN1-212ENST00000531625 MINDY4BA8MYZ0 360 aa22.72■■□□□ 1.23
UBXN1-212ENST00000531625 OAZ1P54368 228 aa22.72■■□□□ 1.23
UBXN1-212ENST00000531625 GJA9P57773 515 aa22.72■■□□□ 1.23
UBXN1-212ENST00000531625 CHST13Q8NET6 341 aa22.72■■□□□ 1.23
UBXN1-212ENST00000531625 APPBP2Q92624 585 aa22.72■■□□□ 1.23
UBXN1-212ENST00000531625 OSBP2Q969R2 916 aa22.72■■□□□ 1.23
UBXN1-212ENST00000531625 FGD4Q96M96 766 aa22.72■■□□□ 1.23
UBXN1-212ENST00000531625 SPC25Q9HBM1 224 aa22.72■■□□□ 1.23
UBXN1-212ENST00000531625 ZNF287Q9HBT7 754 aa22.72■■□□□ 1.23
UBXN1-212ENST00000531625 FEM1BQ9UK73 627 aa22.72■■□□□ 1.23
UBXN1-212ENST00000531625 CTDP1Q9Y5B0 961 aaPredicted RBP22.72■■□□□ 1.23
UBXN1-212ENST00000531625 MUC3AQ02505 3323 aa22.72■■□□□ 1.23
UBXN1-212ENST00000531625 MCM3APO60318 1980 aa22.71■■□□□ 1.23
UBXN1-212ENST00000531625 SMARCA5O60264 1052 aaPredicted RBP22.71■■□□□ 1.23
UBXN1-212ENST00000531625 NEFLP07196 543 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms