RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 RNF113AO15541 343 aaKnown RBP22.03■■□□□ 1.12
SSSCA1-206ENST00000531405 GPAA1O43292 621 aa22.03■■□□□ 1.12
SSSCA1-206ENST00000531405 PRDM1O75626 825 aa22.03■■□□□ 1.12
SSSCA1-206ENST00000531405 COPB2P35606 906 aa22.03■■□□□ 1.12
SSSCA1-206ENST00000531405 C1orf53Q5VUE5 145 aa22.03■■□□□ 1.12
SSSCA1-206ENST00000531405 FAM109BQ6ICB4 259 aaPredicted RBP22.03■■□□□ 1.12
SSSCA1-206ENST00000531405 GIMAP6Q6P9H5 292 aa22.03■■□□□ 1.12
SSSCA1-206ENST00000531405 TEX13BQ9BXU2 312 aa22.03■■□□□ 1.12
SSSCA1-206ENST00000531405 CLIP2Q9UDT6 1046 aa22.03■■□□□ 1.12
SSSCA1-206ENST00000531405 ITGB8P26012 769 aa22.02■■□□□ 1.12
SSSCA1-206ENST00000531405 TDO2P48775 406 aa22.02■■□□□ 1.12
SSSCA1-206ENST00000531405 RNF180Q86T96 592 aa22.02■■□□□ 1.12
SSSCA1-206ENST00000531405 CPXCR1Q8N123 301 aa22.02■■□□□ 1.12
SSSCA1-206ENST00000531405 GPATCH3Q96I76 525 aa22.02■■□□□ 1.12
SSSCA1-206ENST00000531405 DCTPP1Q9H773 170 aa22.02■■□□□ 1.12
SSSCA1-206ENST00000531405 IGKV6D-41A0A0C4DH26 115 aa22.01■■□□□ 1.11
SSSCA1-206ENST00000531405 A0A1W2PQ45 241 aaPredicted RBP22.01■■□□□ 1.11
SSSCA1-206ENST00000531405 A0A1W2PQY0 241 aa22.01■■□□□ 1.11
SSSCA1-206ENST00000531405 APPP05067 770 aa22.01■■□□□ 1.11
SSSCA1-206ENST00000531405 AKR1A1P14550 325 aa22.01■■□□□ 1.11
SSSCA1-206ENST00000531405 PRPF38AQ8NAV1 312 aaKnown RBP22.01■■□□□ 1.11
SSSCA1-206ENST00000531405 KIFC2Q96AC6 838 aa22.01■■□□□ 1.11
SSSCA1-206ENST00000531405 CNPY2Q9Y2B0 182 aa22.01■■□□□ 1.11
SSSCA1-206ENST00000531405 VCANP13611 3396 aa22.01■■□□□ 1.11
SSSCA1-206ENST00000531405 PQBP1O60828 265 aaKnown RBP22■■□□□ 1.11
SSSCA1-206ENST00000531405 ADAMTS4O75173 837 aa22■■□□□ 1.11
SSSCA1-206ENST00000531405 ZNF697Q5TEC3 545 aa22■■□□□ 1.11
SSSCA1-206ENST00000531405 LRRC47Q8N1G4 583 aaKnown RBP22■■□□□ 1.11
SSSCA1-206ENST00000531405 DDX11Q96FC9 970 aa22■■□□□ 1.11
SSSCA1-206ENST00000531405 CEP95Q96GE4 821 aa22■■□□□ 1.11
SSSCA1-206ENST00000531405 RAVER2Q9HCJ3 691 aaKnown RBP22■■□□□ 1.11
SSSCA1-206ENST00000531405 SYNRGQ9UMZ2 1314 aa22■■□□□ 1.11
SSSCA1-206ENST00000531405 DNAJC25-GNG10A0A024R161 153 aa21.99■■□□□ 1.11
SSSCA1-206ENST00000531405 SNAI1O95863 264 aaPredicted RBP21.99■■□□□ 1.11
SSSCA1-206ENST00000531405 ZFYP08048 801 aaPredicted RBP21.99■■□□□ 1.11
SSSCA1-206ENST00000531405 CLTBP09497 229 aa21.99■■□□□ 1.11
SSSCA1-206ENST00000531405 ZNF444Q8N0Y2 327 aaPredicted RBP21.99■■□□□ 1.11
SSSCA1-206ENST00000531405 SEC62Q99442 399 aaKnown RBP21.99■■□□□ 1.11
SSSCA1-206ENST00000531405 ZHX1Q9UKY1 873 aaPredicted RBP21.99■■□□□ 1.11
SSSCA1-206ENST00000531405 ZBED4O75132 1171 aa21.98■■□□□ 1.11
SSSCA1-206ENST00000531405 GNAT2P19087 354 aa21.98■■□□□ 1.11
SSSCA1-206ENST00000531405 IFNL3Q8IZI9 196 aa21.98■■□□□ 1.11
SSSCA1-206ENST00000531405 MTMR4Q9NYA4 1195 aa21.98■■□□□ 1.11
SSSCA1-206ENST00000531405 CTDP1Q9Y5B0 961 aaPredicted RBP21.98■■□□□ 1.11
SSSCA1-206ENST00000531405 TACC3Q9Y6A5 838 aa21.98■■□□□ 1.11
SSSCA1-206ENST00000531405 SYNGAP1Q96PV0 1343 aa21.98■■□□□ 1.11
SSSCA1-206ENST00000531405 ACLYP53396 1101 aa21.97■■□□□ 1.11
SSSCA1-206ENST00000531405 EPHB4P54760 987 aa21.97■■□□□ 1.11
SSSCA1-206ENST00000531405 IRX5P78411 483 aaPredicted RBP21.97■■□□□ 1.11
SSSCA1-206ENST00000531405 MSL3Q8N5Y2 521 aaKnown RBP21.97■■□□□ 1.11
SSSCA1-206ENST00000531405 MKL1Q969V6 931 aa21.97■■□□□ 1.11
SSSCA1-206ENST00000531405 SLC38A10Q9HBR0 1119 aa21.97■■□□□ 1.11
SSSCA1-206ENST00000531405 FAM184BQ9ULE4 1060 aa21.97■■□□□ 1.11
SSSCA1-206ENST00000531405 LCTP09848 1927 aa21.97■■□□□ 1.11
SSSCA1-206ENST00000531405 LRRC37A2A6NM11 1700 aa21.97■■□□□ 1.11
SSSCA1-206ENST00000531405 MYADML2A6NDP7 307 aa21.96■■□□□ 1.11
SSSCA1-206ENST00000531405 PATL2C9JE40 543 aaKnown RBP21.96■■□□□ 1.11
SSSCA1-206ENST00000531405 ATP2A1O14983 1001 aa21.96■■□□□ 1.11
SSSCA1-206ENST00000531405 ADCY6O43306 1168 aa21.96■■□□□ 1.11
SSSCA1-206ENST00000531405 MAMDC4Q6UXC1 1216 aa21.96■■□□□ 1.11
SSSCA1-206ENST00000531405 OTUD7AQ8TE49 926 aaPredicted RBP21.96■■□□□ 1.11
SSSCA1-206ENST00000531405 CHMP4CQ96CF2 233 aa21.96■■□□□ 1.11
SSSCA1-206ENST00000531405 FGD4Q96M96 766 aa21.96■■□□□ 1.11
SSSCA1-206ENST00000531405 ZNF287Q9HBT7 754 aa21.96■■□□□ 1.11
SSSCA1-206ENST00000531405 FEM1BQ9UK73 627 aa21.96■■□□□ 1.11
SSSCA1-206ENST00000531405 KIAA0355O15063 1070 aa21.95■■□□□ 1.1
SSSCA1-206ENST00000531405 TTLL1O95922 423 aa21.95■■□□□ 1.1
SSSCA1-206ENST00000531405 RAG1P15918 1043 aa21.95■■□□□ 1.1
SSSCA1-206ENST00000531405 KCNA10Q16322 511 aa21.95■■□□□ 1.1
SSSCA1-206ENST00000531405 ANKRD35Q8N283 1001 aa21.95■■□□□ 1.1
SSSCA1-206ENST00000531405 KLHDC9Q8NEP7 349 aa21.95■■□□□ 1.1
SSSCA1-206ENST00000531405 CDX2Q99626 313 aaPredicted RBP21.95■■□□□ 1.1
SSSCA1-206ENST00000531405 TSEN34Q9BSV6 310 aaKnown RBP21.95■■□□□ 1.1
SSSCA1-206ENST00000531405 SEMA6BQ9H3T3 888 aa21.95■■□□□ 1.1
SSSCA1-206ENST00000531405 STARD7Q9NQZ5 370 aa21.95■■□□□ 1.1
SSSCA1-206ENST00000531405 HOMER2Q9NSB8 354 aa21.95■■□□□ 1.1
SSSCA1-206ENST00000531405 TMEM39AQ9NV64 488 aa21.95■■□□□ 1.1
SSSCA1-206ENST00000531405 PLIN4Q96Q06 1357 aa21.95■■□□□ 1.1
SSSCA1-206ENST00000531405 TSPY3P0CV98 308 aa21.94■■□□□ 1.1
SSSCA1-206ENST00000531405 TSPY8P0CW00 308 aa21.94■■□□□ 1.1
SSSCA1-206ENST00000531405 FAAP100Q0VG06 881 aa21.94■■□□□ 1.1
SSSCA1-206ENST00000531405 ACVR2BQ13705 512 aa21.94■■□□□ 1.1
SSSCA1-206ENST00000531405 SLFN13Q68D06 897 aa21.94■■□□□ 1.1
SSSCA1-206ENST00000531405 CCSAPQ6IQ19 270 aaPredicted RBP21.94■■□□□ 1.1
SSSCA1-206ENST00000531405 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.94■■□□□ 1.1
SSSCA1-206ENST00000531405 GMCL1P1Q8NEA9 526 aa21.94■■□□□ 1.1
SSSCA1-206ENST00000531405 PI4K2BQ8TCG2 481 aa21.94■■□□□ 1.1
SSSCA1-206ENST00000531405 TTYH1Q9H313 450 aaPredicted RBP21.94■■□□□ 1.1
SSSCA1-206ENST00000531405 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.94■■□□□ 1.1
SSSCA1-206ENST00000531405 ISY1Q9ULR0 285 aaKnown RBP21.94■■□□□ 1.1
SSSCA1-206ENST00000531405 BMP3P12645 472 aa21.93■■□□□ 1.1
SSSCA1-206ENST00000531405 SMAD3P84022 425 aaKnown RBP21.93■■□□□ 1.1
SSSCA1-206ENST00000531405 TTC41PQ6P2S7 1318 aa21.93■■□□□ 1.1
SSSCA1-206ENST00000531405 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.93■■□□□ 1.1
SSSCA1-206ENST00000531405 ZNF467Q7Z7K2 595 aaPredicted RBP21.93■■□□□ 1.1
SSSCA1-206ENST00000531405 NEDD1Q8NHV4 660 aa21.93■■□□□ 1.1
SSSCA1-206ENST00000531405 NUP133Q8WUM0 1156 aa21.93■■□□□ 1.1
SSSCA1-206ENST00000531405 RNPC3Q96LT9 517 aaKnown RBP21.93■■□□□ 1.1
SSSCA1-206ENST00000531405 FSD1Q9BTV5 496 aa21.93■■□□□ 1.1
SSSCA1-206ENST00000531405 NACAP1Q9BZK3 213 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms