RNA–Protein interactions for RNA: ENST00000531336.1

SMPD1-206, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 2

Gene SMPD1, Length 650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-206ENST00000531336 ERVK-9P63128 1117 aa16.15■□□□□ 0.18
SMPD1-206ENST00000531336 ERVK-24P63145 666 aa16.15■□□□□ 0.18
SMPD1-206ENST00000531336 LACTBP83111 547 aaPredicted RBP16.15■□□□□ 0.18
SMPD1-206ENST00000531336 PLS1Q14651 629 aa16.15■□□□□ 0.18
SMPD1-206ENST00000531336 KIF22Q14807 665 aa16.15■□□□□ 0.18
SMPD1-206ENST00000531336 GRM4Q14833 912 aa16.15■□□□□ 0.18
SMPD1-206ENST00000531336 ASPRV1Q53RT3 343 aa16.15■□□□□ 0.18
SMPD1-206ENST00000531336 GPATCH4Q5T3I0 446 aaKnown RBP16.15■□□□□ 0.18
SMPD1-206ENST00000531336 SYDE2Q5VT97 1194 aa16.15■□□□□ 0.18
SMPD1-206ENST00000531336 TMTC2Q8N394 836 aa16.15■□□□□ 0.18
SMPD1-206ENST00000531336 MB21D1Q8N884 522 aa16.15■□□□□ 0.18
SMPD1-206ENST00000531336 GPRC5AQ8NFJ5 357 aa16.15■□□□□ 0.18
SMPD1-206ENST00000531336 ERO1AQ96HE7 468 aa16.15■□□□□ 0.18
SMPD1-206ENST00000531336 BACH2Q9BYV9 841 aa16.15■□□□□ 0.18
SMPD1-206ENST00000531336 C22orf23Q9BZE7 217 aa16.15■□□□□ 0.18
SMPD1-206ENST00000531336 ARHGAP39Q9C0H5 1083 aa16.15■□□□□ 0.18
SMPD1-206ENST00000531336 NAP1L2Q9ULW6 460 aaPredicted RBP16.15■□□□□ 0.18
SMPD1-206ENST00000531336 CTDP1Q9Y5B0 961 aaPredicted RBP16.15■□□□□ 0.18
SMPD1-206ENST00000531336 SLC12A7Q9Y666 1083 aa16.15■□□□□ 0.18
SMPD1-206ENST00000531336 PLA2G6O60733 806 aa16.14■□□□□ 0.17
SMPD1-206ENST00000531336 RXRAP19793 462 aa16.14■□□□□ 0.17
SMPD1-206ENST00000531336 SNAP25P60880 206 aa16.14■□□□□ 0.17
SMPD1-206ENST00000531336 TROAPQ12815 778 aa16.14■□□□□ 0.17
SMPD1-206ENST00000531336 SGMS1Q86VZ5 419 aa16.14■□□□□ 0.17
SMPD1-206ENST00000531336 MICU3Q86XE3 530 aa16.14■□□□□ 0.17
SMPD1-206ENST00000531336 STAG2Q8N3U4 1231 aa16.14■□□□□ 0.17
SMPD1-206ENST00000531336 BRF1Q92994 677 aa16.14■□□□□ 0.17
SMPD1-206ENST00000531336 CPVLQ9H3G5 476 aa16.14■□□□□ 0.17
SMPD1-206ENST00000531336 PRR12Q9ULL5 1215 aa16.14■□□□□ 0.17
SMPD1-206ENST00000531336 ADAMTS5Q9UNA0 930 aa16.14■□□□□ 0.17
SMPD1-206ENST00000531336 KLF18A0A0U1RQI7 1052 aa16.13■□□□□ 0.17
SMPD1-206ENST00000531336 ZBED4O75132 1171 aa16.13■□□□□ 0.17
SMPD1-206ENST00000531336 CAP1Q01518 475 aa16.13■□□□□ 0.17
SMPD1-206ENST00000531336 APOBRQ0VD83 1088 aa16.13■□□□□ 0.17
SMPD1-206ENST00000531336 TMEM132BQ14DG7 1078 aa16.13■□□□□ 0.17
SMPD1-206ENST00000531336 Q3C1V9 767 aa16.13■□□□□ 0.17
SMPD1-206ENST00000531336 APOA5Q6Q788 366 aa16.13■□□□□ 0.17
SMPD1-206ENST00000531336 BTNL9Q6UXG8 535 aa16.13■□□□□ 0.17
SMPD1-206ENST00000531336 SYNE3Q6ZMZ3 975 aa16.13■□□□□ 0.17
SMPD1-206ENST00000531336 CCDC144CPQ8IYA2 1237 aa16.13■□□□□ 0.17
SMPD1-206ENST00000531336 REPS2Q8NFH8 660 aa16.13■□□□□ 0.17
SMPD1-206ENST00000531336 CTCFLQ8NI51 663 aaPredicted RBP16.13■□□□□ 0.17
SMPD1-206ENST00000531336 UBA5Q9GZZ9 404 aa16.13■□□□□ 0.17
SMPD1-206ENST00000531336 SPATC1LQ9H0A9 340 aa16.13■□□□□ 0.17
SMPD1-206ENST00000531336 PRDM10Q9NQV6 1147 aa16.13■□□□□ 0.17
SMPD1-206ENST00000531336 PDRG1Q9NUG6 133 aa16.13■□□□□ 0.17
SMPD1-206ENST00000531336 MAD2L2Q9UI95 211 aa16.13■□□□□ 0.17
SMPD1-206ENST00000531336 BRPF3Q9ULD4 1205 aa16.13■□□□□ 0.17
SMPD1-206ENST00000531336 DHX16O60231 1041 aaKnown RBP16.12■□□□□ 0.17
SMPD1-206ENST00000531336 CALM1P0DP23 149 aa16.12■□□□□ 0.17
SMPD1-206ENST00000531336 CALM2P0DP24 149 aa16.12■□□□□ 0.17
SMPD1-206ENST00000531336 CALM3P0DP25 149 aa16.12■□□□□ 0.17
SMPD1-206ENST00000531336 CTGFP29279 349 aa16.12■□□□□ 0.17
SMPD1-206ENST00000531336 PSMC4P43686 418 aa16.12■□□□□ 0.17
SMPD1-206ENST00000531336 SLC4A3P48751 1232 aa16.12■□□□□ 0.17
SMPD1-206ENST00000531336 FCGRTP55899 365 aa16.12■□□□□ 0.17
SMPD1-206ENST00000531336 CCNA1P78396 465 aa16.12■□□□□ 0.17
SMPD1-206ENST00000531336 WDR78Q5VTH9 848 aa16.12■□□□□ 0.17
SMPD1-206ENST00000531336 CCDC174Q6PII3 467 aa16.12■□□□□ 0.17
SMPD1-206ENST00000531336 CCAR1Q8IX12 1150 aaKnown RBP16.12■□□□□ 0.17
SMPD1-206ENST00000531336 CPXCR1Q8N123 301 aa16.12■□□□□ 0.17
SMPD1-206ENST00000531336 IL17RAQ96F46 866 aa16.12■□□□□ 0.17
SMPD1-206ENST00000531336 PORCNQ9H237 461 aa16.12■□□□□ 0.17
SMPD1-206ENST00000531336 SLC38A10Q9HBR0 1119 aa16.12■□□□□ 0.17
SMPD1-206ENST00000531336 CWC22Q9HCG8 908 aaKnown RBP16.12■□□□□ 0.17
SMPD1-206ENST00000531336 RAVER2Q9HCJ3 691 aaKnown RBP16.12■□□□□ 0.17
SMPD1-206ENST00000531336 DOCK3Q8IZD9 2030 aa16.11■□□□□ 0.17
SMPD1-206ENST00000531336 PALM3A6NDB9 673 aaPredicted RBP16.11■□□□□ 0.17
SMPD1-206ENST00000531336 GOLGA8AA7E2F4 631 aa16.11■□□□□ 0.17
SMPD1-206ENST00000531336 GOLGA8BA8MQT2 603 aa16.11■□□□□ 0.17
SMPD1-206ENST00000531336 KLRF2D3W0D1 207 aa16.11■□□□□ 0.17
SMPD1-206ENST00000531336 ZBTB43O43298 467 aa16.11■□□□□ 0.17
SMPD1-206ENST00000531336 FMNL1O95466 1100 aaPredicted RBP16.11■□□□□ 0.17
SMPD1-206ENST00000531336 KIF5BP33176 963 aa16.11■□□□□ 0.17
SMPD1-206ENST00000531336 RBM25P49756 843 aaKnown RBP16.11■□□□□ 0.17
SMPD1-206ENST00000531336 TOB2Q14106 344 aaPredicted RBP16.11■□□□□ 0.17
SMPD1-206ENST00000531336 SNRNP48Q6IEG0 339 aaKnown RBP16.11■□□□□ 0.17
SMPD1-206ENST00000531336 TRIM47Q96LD4 638 aa16.11■□□□□ 0.17
SMPD1-206ENST00000531336 MOV10L1Q9BXT6 1211 aaKnown RBP16.11■□□□□ 0.17
SMPD1-206ENST00000531336 AGXT2Q9BYV1 514 aa16.11■□□□□ 0.17
SMPD1-206ENST00000531336 RANBP17Q9H2T7 1088 aaKnown RBP16.11■□□□□ 0.17
SMPD1-206ENST00000531336 EFCC1Q9HA90 598 aa16.11■□□□□ 0.17
SMPD1-206ENST00000531336 ZNF214Q9UL59 606 aaPredicted RBP16.11■□□□□ 0.17
SMPD1-206ENST00000531336 TNPO2O14787 897 aaKnown RBP16.1■□□□□ 0.17
SMPD1-206ENST00000531336 FDX1P10109 184 aa16.1■□□□□ 0.17
SMPD1-206ENST00000531336 TAL1P17542 331 aaPredicted RBP16.1■□□□□ 0.17
SMPD1-206ENST00000531336 NCAPG2Q86XI2 1143 aa16.1■□□□□ 0.17
SMPD1-206ENST00000531336 ADGRF4Q8IZF3 695 aa16.1■□□□□ 0.17
SMPD1-206ENST00000531336 MAP3K14Q99558 947 aa16.1■□□□□ 0.17
SMPD1-206ENST00000531336 LARP6Q9BRS8 491 aaKnown RBP16.1■□□□□ 0.17
SMPD1-206ENST00000531336 TRIM17Q9Y577 477 aa16.1■□□□□ 0.17
SMPD1-206ENST00000531336 SMCHD1A6NHR9 2005 aa16.1■□□□□ 0.17
SMPD1-206ENST00000531336 RBBP6Q7Z6E9 1792 aaKnown RBP16.1■□□□□ 0.17
SMPD1-206ENST00000531336 BAZ2BQ9UIF8 2168 aaKnown RBP16.1■□□□□ 0.17
SMPD1-206ENST00000531336 PLEKHA8P1O95397 391 aa16.09■□□□□ 0.17
SMPD1-206ENST00000531336 ERCC3P19447 782 aa16.09■□□□□ 0.17
SMPD1-206ENST00000531336 MAPK4P31152 587 aa16.09■□□□□ 0.17
SMPD1-206ENST00000531336 STAT3P40763 770 aa16.09■□□□□ 0.17
SMPD1-206ENST00000531336 NEK4P51957 841 aa16.09■□□□□ 0.17
SMPD1-206ENST00000531336 ARHGEF6Q15052 776 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms