RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 STXBP5LQ9Y2K9 1186 aa21.28■■□□□ 1
PTPN11-204ENST00000531326 ROBO3Q96MS0 1386 aa21.27■■□□□ 1
PTPN11-204ENST00000531326 TAL1P17542 331 aaPredicted RBP21.27■■□□□ 1
PTPN11-204ENST00000531326 TRIM60Q495X7 471 aa21.27■■□□□ 1
PTPN11-204ENST00000531326 ZMYM1Q5SVZ6 1142 aa21.27■■□□□ 1
PTPN11-204ENST00000531326 FERMT2Q96AC1 680 aa21.27■■□□□ 1
PTPN11-204ENST00000531326 EPB41L4AQ9HCS5 686 aaPredicted RBP21.27■■□□□ 1
PTPN11-204ENST00000531326 PRKAG2Q9UGJ0 569 aa21.27■■□□□ 1
PTPN11-204ENST00000531326 GIMAP6Q6P9H5 292 aa21.26■□□□□ 0.99
PTPN11-204ENST00000531326 TINF2Q9BSI4 451 aa21.26■□□□□ 0.99
PTPN11-204ENST00000531326 NYAP2Q9P242 653 aa21.26■□□□□ 0.99
PTPN11-204ENST00000531326 NRBP1Q9UHY1 535 aa21.26■□□□□ 0.99
PTPN11-204ENST00000531326 DIS3Q9Y2L1 958 aaKnown RBP21.26■□□□□ 0.99
PTPN11-204ENST00000531326 MINDY4BA8MYZ0 360 aa21.25■□□□□ 0.99
PTPN11-204ENST00000531326 POTEB2H3BUK9 544 aa21.25■□□□□ 0.99
PTPN11-204ENST00000531326 M0R2C6 588 aa21.25■□□□□ 0.99
PTPN11-204ENST00000531326 DLL1O00548 723 aa21.25■□□□□ 0.99
PTPN11-204ENST00000531326 KCTD2Q14681 263 aa21.25■□□□□ 0.99
PTPN11-204ENST00000531326 SEC62Q99442 399 aaKnown RBP21.25■□□□□ 0.99
PTPN11-204ENST00000531326 MKNK2Q9HBH9 465 aa21.25■□□□□ 0.99
PTPN11-204ENST00000531326 PDLIM7Q9NR12 457 aa21.25■□□□□ 0.99
PTPN11-204ENST00000531326 MYH4Q9Y623 1939 aa21.25■□□□□ 0.99
PTPN11-204ENST00000531326 IGKV6D-41A0A0C4DH26 115 aa21.24■□□□□ 0.99
PTPN11-204ENST00000531326 F5H6K3 240 aa21.24■□□□□ 0.99
PTPN11-204ENST00000531326 GPAA1O43292 621 aa21.24■□□□□ 0.99
PTPN11-204ENST00000531326 NDUFB10O96000 172 aa21.24■□□□□ 0.99
PTPN11-204ENST00000531326 ZNF865P0CJ78 1059 aaPredicted RBP21.24■□□□□ 0.99
PTPN11-204ENST00000531326 KLRC3Q07444 240 aa21.24■□□□□ 0.99
PTPN11-204ENST00000531326 C1orf53Q5VUE5 145 aa21.24■□□□□ 0.99
PTPN11-204ENST00000531326 SH3RF1Q7Z6J0 888 aa21.24■□□□□ 0.99
PTPN11-204ENST00000531326 SLF1Q9BQI6 1058 aa21.24■□□□□ 0.99
PTPN11-204ENST00000531326 XPNPEP3Q9NQH7 507 aa21.24■□□□□ 0.99
PTPN11-204ENST00000531326 PRDM5Q9NQX1 630 aaPredicted RBP21.24■□□□□ 0.99
PTPN11-204ENST00000531326 RIPK3Q9Y572 518 aa21.24■□□□□ 0.99
PTPN11-204ENST00000531326 UNC80Q8N2C7 3258 aa21.24■□□□□ 0.99
PTPN11-204ENST00000531326 TRIM43BA6NCK2 446 aa21.23■□□□□ 0.99
PTPN11-204ENST00000531326 PGK1P00558 417 aa21.23■□□□□ 0.99
PTPN11-204ENST00000531326 RARBP10826 455 aa21.23■□□□□ 0.99
PTPN11-204ENST00000531326 COPB2P35606 906 aa21.23■□□□□ 0.99
PTPN11-204ENST00000531326 BMP2KLQ5H9B9 411 aa21.23■□□□□ 0.99
PTPN11-204ENST00000531326 TRIM43Q96BQ3 446 aaPredicted RBP21.23■□□□□ 0.99
PTPN11-204ENST00000531326 LENG1Q96BZ8 264 aaPredicted RBP21.23■□□□□ 0.99
PTPN11-204ENST00000531326 FAM227BQ96M60 508 aa21.23■□□□□ 0.99
PTPN11-204ENST00000531326 PHF24Q9UPV7 400 aa21.23■□□□□ 0.99
PTPN11-204ENST00000531326 A0A0D9SFI3 127 aa21.22■□□□□ 0.99
PTPN11-204ENST00000531326 PRDM1O75626 825 aa21.22■□□□□ 0.99
PTPN11-204ENST00000531326 NMIQ13287 307 aaPredicted RBP21.22■□□□□ 0.99
PTPN11-204ENST00000531326 SHHQ15465 462 aa21.22■□□□□ 0.99
PTPN11-204ENST00000531326 C9orf50Q5SZB4 431 aa21.22■□□□□ 0.99
PTPN11-204ENST00000531326 FAM109BQ6ICB4 259 aaPredicted RBP21.22■□□□□ 0.99
PTPN11-204ENST00000531326 SNRNP48Q6IEG0 339 aaKnown RBP21.22■□□□□ 0.99
PTPN11-204ENST00000531326 BADQ92934 168 aa21.22■□□□□ 0.99
PTPN11-204ENST00000531326 GUCD1Q96NT3 240 aa21.22■□□□□ 0.99
PTPN11-204ENST00000531326 TEX13BQ9BXU2 312 aa21.22■□□□□ 0.99
PTPN11-204ENST00000531326 CLIP2Q9UDT6 1046 aa21.22■□□□□ 0.99
PTPN11-204ENST00000531326 TLE2Q04725 743 aa21.21■□□□□ 0.99
PTPN11-204ENST00000531326 PRPF38AQ8NAV1 312 aaKnown RBP21.21■□□□□ 0.99
PTPN11-204ENST00000531326 HELLSQ9NRZ9 838 aa21.21■□□□□ 0.99
PTPN11-204ENST00000531326 GTF3C3Q9Y5Q9 886 aa21.21■□□□□ 0.99
PTPN11-204ENST00000531326 DNAJC25-GNG10A0A024R161 153 aa21.2■□□□□ 0.98
PTPN11-204ENST00000531326 AKR1A1P14550 325 aa21.2■□□□□ 0.98
PTPN11-204ENST00000531326 ITGB8P26012 769 aa21.2■□□□□ 0.98
PTPN11-204ENST00000531326 TDO2P48775 406 aa21.2■□□□□ 0.98
PTPN11-204ENST00000531326 CCDC129Q6ZRS4 1044 aa21.2■□□□□ 0.98
PTPN11-204ENST00000531326 RNF180Q86T96 592 aa21.2■□□□□ 0.98
PTPN11-204ENST00000531326 CEP95Q96GE4 821 aa21.2■□□□□ 0.98
PTPN11-204ENST00000531326 EYSQ5T1H1 3165 aa21.2■□□□□ 0.98
PTPN11-204ENST00000531326 A0A1W2PQ45 241 aaPredicted RBP21.19■□□□□ 0.98
PTPN11-204ENST00000531326 A0A1W2PQY0 241 aa21.19■□□□□ 0.98
PTPN11-204ENST00000531326 HIP1O00291 1037 aa21.19■□□□□ 0.98
PTPN11-204ENST00000531326 ATP2A1O14983 1001 aa21.19■□□□□ 0.98
PTPN11-204ENST00000531326 ADAMTS4O75173 837 aa21.19■□□□□ 0.98
PTPN11-204ENST00000531326 SNAI1O95863 264 aaPredicted RBP21.19■□□□□ 0.98
PTPN11-204ENST00000531326 GNAT2P19087 354 aa21.19■□□□□ 0.98
PTPN11-204ENST00000531326 CPXCR1Q8N123 301 aa21.19■□□□□ 0.98
PTPN11-204ENST00000531326 MKL1Q969V6 931 aa21.19■□□□□ 0.98
PTPN11-204ENST00000531326 FAM161BQ96MY7 647 aa21.19■□□□□ 0.98
PTPN11-204ENST00000531326 DIAPH3Q9NSV4 1193 aa21.19■□□□□ 0.98
PTPN11-204ENST00000531326 MTMR4Q9NYA4 1195 aa21.19■□□□□ 0.98
PTPN11-204ENST00000531326 PATL2C9JE40 543 aaKnown RBP21.18■□□□□ 0.98
PTPN11-204ENST00000531326 APPP05067 770 aa21.18■□□□□ 0.98
PTPN11-204ENST00000531326 CHMLP26374 656 aa21.18■□□□□ 0.98
PTPN11-204ENST00000531326 MCMDC2Q4G0Z9 681 aa21.18■□□□□ 0.98
PTPN11-204ENST00000531326 MAMDC4Q6UXC1 1216 aa21.18■□□□□ 0.98
PTPN11-204ENST00000531326 ZNF589Q86UQ0 364 aaPredicted RBP21.18■□□□□ 0.98
PTPN11-204ENST00000531326 IFNL3Q8IZI9 196 aa21.18■□□□□ 0.98
PTPN11-204ENST00000531326 ZNF444Q8N0Y2 327 aaPredicted RBP21.18■□□□□ 0.98
PTPN11-204ENST00000531326 MSL3Q8N5Y2 521 aaKnown RBP21.18■□□□□ 0.98
PTPN11-204ENST00000531326 SLC38A10Q9HBR0 1119 aa21.18■□□□□ 0.98
PTPN11-204ENST00000531326 RAVER2Q9HCJ3 691 aaKnown RBP21.18■□□□□ 0.98
PTPN11-204ENST00000531326 CNPY2Q9Y2B0 182 aa21.18■□□□□ 0.98
PTPN11-204ENST00000531326 SYNGAP1Q96PV0 1343 aa21.18■□□□□ 0.98
PTPN11-204ENST00000531326 MCM3APO60318 1980 aa21.17■□□□□ 0.98
PTPN11-204ENST00000531326 SLC4A3P48751 1232 aa21.17■□□□□ 0.98
PTPN11-204ENST00000531326 CWC27Q6UX04 472 aaKnown RBP21.17■□□□□ 0.98
PTPN11-204ENST00000531326 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.17■□□□□ 0.98
PTPN11-204ENST00000531326 LRRC47Q8N1G4 583 aaKnown RBP21.17■□□□□ 0.98
PTPN11-204ENST00000531326 KIFC2Q96AC6 838 aa21.17■□□□□ 0.98
PTPN11-204ENST00000531326 DDX11Q96FC9 970 aa21.17■□□□□ 0.98
PTPN11-204ENST00000531326 FGD4Q96M96 766 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms