RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 PHF24Q9UPV7 400 aa18.87■□□□□ 0.61
CHMP4A-204ENST00000530996 DIS3Q9Y2L1 958 aaKnown RBP18.87■□□□□ 0.61
CHMP4A-204ENST00000530996 LTBP2Q14767 1821 aa18.86■□□□□ 0.61
CHMP4A-204ENST00000530996 PARP14Q460N5 1801 aa18.86■□□□□ 0.61
CHMP4A-204ENST00000530996 A0A1W2PQ45 241 aaPredicted RBP18.86■□□□□ 0.61
CHMP4A-204ENST00000530996 A0A1W2PQY0 241 aa18.86■□□□□ 0.61
CHMP4A-204ENST00000530996 TLE2Q04725 743 aa18.86■□□□□ 0.61
CHMP4A-204ENST00000530996 IKQ13123 557 aaPredicted RBP18.86■□□□□ 0.61
CHMP4A-204ENST00000530996 SHHQ15465 462 aa18.86■□□□□ 0.61
CHMP4A-204ENST00000530996 C9orf50Q5SZB4 431 aa18.86■□□□□ 0.61
CHMP4A-204ENST00000530996 SH3RF1Q7Z6J0 888 aa18.86■□□□□ 0.61
CHMP4A-204ENST00000530996 PRPF38AQ8NAV1 312 aaKnown RBP18.86■□□□□ 0.61
CHMP4A-204ENST00000530996 FSD1Q9BTV5 496 aa18.86■□□□□ 0.61
CHMP4A-204ENST00000530996 NACAP1Q9BZK3 213 aa18.86■□□□□ 0.61
CHMP4A-204ENST00000530996 SYNRGQ9UMZ2 1314 aa18.85■□□□□ 0.61
CHMP4A-204ENST00000530996 TRIM43BA6NCK2 446 aa18.85■□□□□ 0.61
CHMP4A-204ENST00000530996 CLTBP09497 229 aa18.85■□□□□ 0.61
CHMP4A-204ENST00000530996 TSPY3P0CV98 308 aa18.85■□□□□ 0.61
CHMP4A-204ENST00000530996 TSPY8P0CW00 308 aa18.85■□□□□ 0.61
CHMP4A-204ENST00000530996 TRIM43Q96BQ3 446 aaPredicted RBP18.85■□□□□ 0.61
CHMP4A-204ENST00000530996 CEP95Q96GE4 821 aa18.85■□□□□ 0.61
CHMP4A-204ENST00000530996 RAVER2Q9HCJ3 691 aaKnown RBP18.85■□□□□ 0.61
CHMP4A-204ENST00000530996 HOMER2Q9NSB8 354 aa18.85■□□□□ 0.61
CHMP4A-204ENST00000530996 COL11A1P12107 1806 aaPredicted RBP18.84■□□□□ 0.61
CHMP4A-204ENST00000530996 SYNGAP1Q96PV0 1343 aa18.84■□□□□ 0.61
CHMP4A-204ENST00000530996 ERC2O15083 957 aa18.84■□□□□ 0.61
CHMP4A-204ENST00000530996 TTLL1O95922 423 aa18.84■□□□□ 0.61
CHMP4A-204ENST00000530996 SLC3A2P08195 630 aaKnown RBP18.84■□□□□ 0.61
CHMP4A-204ENST00000530996 ZNF865P0CJ78 1059 aaPredicted RBP18.84■□□□□ 0.61
CHMP4A-204ENST00000530996 FAM109BQ6ICB4 259 aaPredicted RBP18.84■□□□□ 0.61
CHMP4A-204ENST00000530996 ANKRD35Q8N283 1001 aa18.84■□□□□ 0.61
CHMP4A-204ENST00000530996 GUCD1Q96NT3 240 aa18.84■□□□□ 0.61
CHMP4A-204ENST00000530996 NAPBQ9H115 298 aa18.84■□□□□ 0.61
CHMP4A-204ENST00000530996 DCTPP1Q9H773 170 aa18.84■□□□□ 0.61
CHMP4A-204ENST00000530996 STARD7Q9NQZ5 370 aa18.84■□□□□ 0.61
CHMP4A-204ENST00000530996 FAM184BQ9ULE4 1060 aa18.84■□□□□ 0.61
CHMP4A-204ENST00000530996 RIPK3Q9Y572 518 aa18.84■□□□□ 0.61
CHMP4A-204ENST00000530996 GREB1LQ9C091 1923 aaPredicted RBP18.83■□□□□ 0.6
CHMP4A-204ENST00000530996 RAG1P15918 1043 aa18.83■□□□□ 0.6
CHMP4A-204ENST00000530996 PDE4BQ07343 736 aa18.83■□□□□ 0.6
CHMP4A-204ENST00000530996 C1orf53Q5VUE5 145 aa18.83■□□□□ 0.6
CHMP4A-204ENST00000530996 MSL3Q8N5Y2 521 aaKnown RBP18.83■□□□□ 0.6
CHMP4A-204ENST00000530996 NUP133Q8WUM0 1156 aa18.83■□□□□ 0.6
CHMP4A-204ENST00000530996 CHMP4CQ96CF2 233 aa18.83■□□□□ 0.6
CHMP4A-204ENST00000530996 RNPC3Q96LT9 517 aaKnown RBP18.83■□□□□ 0.6
CHMP4A-204ENST00000530996 FBXO40Q9UH90 709 aa18.83■□□□□ 0.6
CHMP4A-204ENST00000530996 FEM1BQ9UK73 627 aa18.83■□□□□ 0.6
CHMP4A-204ENST00000530996 TACC3Q9Y6A5 838 aa18.83■□□□□ 0.6
CHMP4A-204ENST00000530996 IGKV6D-41A0A0C4DH26 115 aa18.82■□□□□ 0.6
CHMP4A-204ENST00000530996 POTEB2H3BUK9 544 aa18.82■□□□□ 0.6
CHMP4A-204ENST00000530996 TMEM39AQ9NV64 488 aa18.82■□□□□ 0.6
CHMP4A-204ENST00000530996 MTMR4Q9NYA4 1195 aa18.82■□□□□ 0.6
CHMP4A-204ENST00000530996 ZBTB47Q9UFB7 747 aaPredicted RBP18.82■□□□□ 0.6
CHMP4A-204ENST00000530996 TTC41PQ6P2S7 1318 aa18.81■□□□□ 0.6
CHMP4A-204ENST00000530996 DCDC2CA8MYV0 355 aa18.81■□□□□ 0.6
CHMP4A-204ENST00000530996 ADAMTS4O75173 837 aa18.81■□□□□ 0.6
CHMP4A-204ENST00000530996 C6orf222P0C671 652 aaPredicted RBP18.81■□□□□ 0.6
CHMP4A-204ENST00000530996 ACLYP53396 1101 aa18.81■□□□□ 0.6
CHMP4A-204ENST00000530996 SLFN13Q68D06 897 aa18.81■□□□□ 0.6
CHMP4A-204ENST00000530996 IFNL3Q8IZI9 196 aa18.81■□□□□ 0.6
CHMP4A-204ENST00000530996 GMCL1P1Q8NEA9 526 aa18.81■□□□□ 0.6
CHMP4A-204ENST00000530996 VTI1AQ96AJ9 217 aa18.81■□□□□ 0.6
CHMP4A-204ENST00000530996 SPC25Q9HBM1 224 aa18.81■□□□□ 0.6
CHMP4A-204ENST00000530996 SLC38A10Q9HBR0 1119 aa18.81■□□□□ 0.6
CHMP4A-204ENST00000530996 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.81■□□□□ 0.6
CHMP4A-204ENST00000530996 PLIN4Q96Q06 1357 aa18.81■□□□□ 0.6
CHMP4A-204ENST00000530996 MOXD2PA6NHM9 499 aa18.8■□□□□ 0.6
CHMP4A-204ENST00000530996 PATL2C9JE40 543 aaKnown RBP18.8■□□□□ 0.6
CHMP4A-204ENST00000530996 TMEM232C9JQI7 657 aa18.8■□□□□ 0.6
CHMP4A-204ENST00000530996 ATP2A1O14983 1001 aa18.8■□□□□ 0.6
CHMP4A-204ENST00000530996 BMP3P12645 472 aa18.8■□□□□ 0.6
CHMP4A-204ENST00000530996 STAT2P52630 851 aa18.8■□□□□ 0.6
CHMP4A-204ENST00000530996 FPGSQ05932 587 aa18.8■□□□□ 0.6
CHMP4A-204ENST00000530996 PPARAQ07869 468 aa18.8■□□□□ 0.6
CHMP4A-204ENST00000530996 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.8■□□□□ 0.6
CHMP4A-204ENST00000530996 SEC62Q99442 399 aaKnown RBP18.8■□□□□ 0.6
CHMP4A-204ENST00000530996 TSEN34Q9BSV6 310 aaKnown RBP18.8■□□□□ 0.6
CHMP4A-204ENST00000530996 SYNPO2Q9UMS6 1093 aa18.8■□□□□ 0.6
CHMP4A-204ENST00000530996 DNAJC25-GNG10A0A024R161 153 aa18.79■□□□□ 0.6
CHMP4A-204ENST00000530996 SNAI1O95863 264 aaPredicted RBP18.79■□□□□ 0.6
CHMP4A-204ENST00000530996 SLC1A4P43007 532 aa18.79■□□□□ 0.6
CHMP4A-204ENST00000530996 TFAP4Q01664 338 aa18.79■□□□□ 0.6
CHMP4A-204ENST00000530996 ACVR2BQ13705 512 aa18.79■□□□□ 0.6
CHMP4A-204ENST00000530996 KCNA10Q16322 511 aa18.79■□□□□ 0.6
CHMP4A-204ENST00000530996 NOL8Q76FK4 1167 aaKnown RBP18.79■□□□□ 0.6
CHMP4A-204ENST00000530996 ARMCX2Q7L311 632 aa18.79■□□□□ 0.6
CHMP4A-204ENST00000530996 CHST13Q8NET6 341 aa18.79■□□□□ 0.6
CHMP4A-204ENST00000530996 MTMR7Q9Y216 660 aa18.79■□□□□ 0.6
CHMP4A-204ENST00000530996 PLXNA1Q9UIW2 1896 aa18.78■□□□□ 0.6
CHMP4A-204ENST00000530996 MYADML2A6NDP7 307 aa18.78■□□□□ 0.6
CHMP4A-204ENST00000530996 TSPY2A6NKD2 308 aa18.78■□□□□ 0.6
CHMP4A-204ENST00000530996 DUSP11O75319 330 aaKnown RBP18.78■□□□□ 0.6
CHMP4A-204ENST00000530996 MX1P20591 662 aa18.78■□□□□ 0.6
CHMP4A-204ENST00000530996 ITGB8P26012 769 aa18.78■□□□□ 0.6
CHMP4A-204ENST00000530996 OAZ1P54368 228 aa18.78■□□□□ 0.6
CHMP4A-204ENST00000530996 SMAD3P84022 425 aaKnown RBP18.78■□□□□ 0.6
CHMP4A-204ENST00000530996 MAMDC4Q6UXC1 1216 aa18.78■□□□□ 0.6
CHMP4A-204ENST00000530996 ZNF467Q7Z7K2 595 aaPredicted RBP18.78■□□□□ 0.6
CHMP4A-204ENST00000530996 NEDD1Q8NHV4 660 aa18.78■□□□□ 0.6
CHMP4A-204ENST00000530996 OTUD7AQ8TE49 926 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms