RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 ZNF397Q8NF99 534 aaPredicted RBP19.47■□□□□ 0.71
BRCA2-204ENST00000530893 ZMYND12Q9H0C1 365 aa19.47■□□□□ 0.71
BRCA2-204ENST00000530893 DISC1Q9NRI5 854 aa19.47■□□□□ 0.71
BRCA2-204ENST00000530893 DNAI1Q9UI46 699 aa19.47■□□□□ 0.71
BRCA2-204ENST00000530893 SNED1Q8TER0 1413 aa19.46■□□□□ 0.71
BRCA2-204ENST00000530893 SERPINB2P05120 415 aa19.46■□□□□ 0.71
BRCA2-204ENST00000530893 GYS1P13807 737 aa19.46■□□□□ 0.71
BRCA2-204ENST00000530893 STAT6P42226 847 aa19.46■□□□□ 0.71
BRCA2-204ENST00000530893 ADKP55263 362 aaKnown RBP19.46■□□□□ 0.71
BRCA2-204ENST00000530893 TMC4Q7Z404 712 aa19.46■□□□□ 0.71
BRCA2-204ENST00000530893 HEATR3Q7Z4Q2 680 aa19.46■□□□□ 0.71
BRCA2-204ENST00000530893 PPFIBP1Q86W92 1011 aa19.46■□□□□ 0.71
BRCA2-204ENST00000530893 EYA3Q99504 573 aa19.46■□□□□ 0.71
BRCA2-204ENST00000530893 MTRQ99707 1265 aa19.46■□□□□ 0.71
BRCA2-204ENST00000530893 LRRC4BQ9NT99 713 aa19.46■□□□□ 0.71
BRCA2-204ENST00000530893 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.46■□□□□ 0.71
BRCA2-204ENST00000530893 GAKO14976 1311 aa19.46■□□□□ 0.71
BRCA2-204ENST00000530893 KLRF2D3W0D1 207 aa19.46■□□□□ 0.71
BRCA2-204ENST00000530893 ADAMTS3O15072 1205 aa19.46■□□□□ 0.71
BRCA2-204ENST00000530893 NOVP48745 357 aa19.46■□□□□ 0.71
BRCA2-204ENST00000530893 STX17P56962 302 aa19.46■□□□□ 0.71
BRCA2-204ENST00000530893 PAK1Q13153 545 aa19.46■□□□□ 0.71
BRCA2-204ENST00000530893 RRAGBQ5VZM2 374 aa19.46■□□□□ 0.71
BRCA2-204ENST00000530893 SLC44A5Q8NCS7 719 aa19.46■□□□□ 0.71
BRCA2-204ENST00000530893 ANKRD20A12PQ8NF67 263 aa19.46■□□□□ 0.71
BRCA2-204ENST00000530893 CCDC51Q96ER9 411 aa19.46■□□□□ 0.71
BRCA2-204ENST00000530893 CCSER1Q9C0I3 900 aa19.46■□□□□ 0.71
BRCA2-204ENST00000530893 LIMA1Q9UHB6 759 aaKnown RBP19.46■□□□□ 0.71
BRCA2-204ENST00000530893 RPN1P04843 607 aaKnown RBP19.45■□□□□ 0.7
BRCA2-204ENST00000530893 GOLGA8FQ08AF8 430 aa19.45■□□□□ 0.7
BRCA2-204ENST00000530893 GOLGA8DPQ0D2H9 430 aa19.45■□□□□ 0.7
BRCA2-204ENST00000530893 ORC2Q13416 577 aaPredicted RBP19.45■□□□□ 0.7
BRCA2-204ENST00000530893 NAA30Q147X3 362 aaPredicted RBP19.45■□□□□ 0.7
BRCA2-204ENST00000530893 SLC35G1Q2M3R5 365 aa19.45■□□□□ 0.7
BRCA2-204ENST00000530893 SLC27A3Q5K4L6 730 aa19.45■□□□□ 0.7
BRCA2-204ENST00000530893 KRT25Q7Z3Z0 450 aa19.45■□□□□ 0.7
BRCA2-204ENST00000530893 SMYD4Q8IYR2 804 aaPredicted RBP19.45■□□□□ 0.7
BRCA2-204ENST00000530893 IGSF22Q8N9C0 903 aa19.45■□□□□ 0.7
BRCA2-204ENST00000530893 AK8Q96MA6 479 aa19.45■□□□□ 0.7
BRCA2-204ENST00000530893 CRAMP1Q96RY5 1269 aa19.45■□□□□ 0.7
BRCA2-204ENST00000530893 CUEDC2Q9H467 287 aa19.45■□□□□ 0.7
BRCA2-204ENST00000530893 MAGEF1Q9HAY2 307 aa19.45■□□□□ 0.7
BRCA2-204ENST00000530893 SAP30BPQ9UHR5 308 aaKnown RBP19.45■□□□□ 0.7
BRCA2-204ENST00000530893 FLT1P17948 1338 aa19.45■□□□□ 0.7
BRCA2-204ENST00000530893 FOCADQ5VW36 1801 aa19.45■□□□□ 0.7
BRCA2-204ENST00000530893 PARP1P09874 1014 aaKnown RBP19.44■□□□□ 0.7
BRCA2-204ENST00000530893 HMGB2P26583 209 aaKnown RBP19.44■□□□□ 0.7
BRCA2-204ENST00000530893 GNA11P29992 359 aa19.44■□□□□ 0.7
BRCA2-204ENST00000530893 KCNB1Q14721 858 aa19.44■□□□□ 0.7
BRCA2-204ENST00000530893 PTPN21Q16825 1174 aa19.44■□□□□ 0.7
BRCA2-204ENST00000530893 CNGA4Q8IV77 575 aa19.44■□□□□ 0.7
BRCA2-204ENST00000530893 BLZF1Q9H2G9 400 aa19.44■□□□□ 0.7
BRCA2-204ENST00000530893 CTNND2Q9UQB3 1225 aa19.44■□□□□ 0.7
BRCA2-204ENST00000530893 MYH1P12882 1939 aa19.44■□□□□ 0.7
BRCA2-204ENST00000530893 hCG_1984214I3L0E3 225 aa19.44■□□□□ 0.7
BRCA2-204ENST00000530893 TEX33O43247 280 aa19.44■□□□□ 0.7
BRCA2-204ENST00000530893 UBA7P41226 1012 aa19.44■□□□□ 0.7
BRCA2-204ENST00000530893 RHBDL3P58872 404 aa19.44■□□□□ 0.7
BRCA2-204ENST00000530893 MFSD14BQ5SR56 506 aa19.44■□□□□ 0.7
BRCA2-204ENST00000530893 SMAP1Q8IYB5 467 aaPredicted RBP19.44■□□□□ 0.7
BRCA2-204ENST00000530893 ZNF713Q8N859 430 aaPredicted RBP19.44■□□□□ 0.7
BRCA2-204ENST00000530893 STAMQ92783 540 aa19.44■□□□□ 0.7
BRCA2-204ENST00000530893 GPR101Q96P66 508 aaPredicted RBP19.44■□□□□ 0.7
BRCA2-204ENST00000530893 LRRC37AA6NMS7 1700 aa19.43■□□□□ 0.7
BRCA2-204ENST00000530893 KLRG2A4D1S0 409 aaPredicted RBP19.43■□□□□ 0.7
BRCA2-204ENST00000530893 TPM1P09493 284 aa19.43■□□□□ 0.7
BRCA2-204ENST00000530893 TBC1D16Q8TBP0 767 aa19.43■□□□□ 0.7
BRCA2-204ENST00000530893 RASGRP4Q8TDF6 673 aa19.43■□□□□ 0.7
BRCA2-204ENST00000530893 RRP36Q96EU6 259 aaKnown RBP19.43■□□□□ 0.7
BRCA2-204ENST00000530893 ARID3AQ99856 593 aa19.43■□□□□ 0.7
BRCA2-204ENST00000530893 C6orf50Q9HD87 102 aa19.43■□□□□ 0.7
BRCA2-204ENST00000530893 OGFRQ9NZT2 677 aa19.43■□□□□ 0.7
BRCA2-204ENST00000530893 SUGT1Q9Y2Z0 365 aa19.43■□□□□ 0.7
BRCA2-204ENST00000530893 PLIN4Q96Q06 1357 aa19.42■□□□□ 0.7
BRCA2-204ENST00000530893 CCDC175P0C221 793 aa19.42■□□□□ 0.7
BRCA2-204ENST00000530893 TRIM14Q14142 442 aa19.42■□□□□ 0.7
BRCA2-204ENST00000530893 KARSQ15046 597 aaKnown RBP19.42■□□□□ 0.7
BRCA2-204ENST00000530893 INF2Q27J81 1249 aa19.42■□□□□ 0.7
BRCA2-204ENST00000530893 SLC51AQ86UW1 340 aa19.42■□□□□ 0.7
BRCA2-204ENST00000530893 SEC63Q9UGP8 760 aaKnown RBP19.42■□□□□ 0.7
BRCA2-204ENST00000530893 LTBP1Q14766 1721 aa19.42■□□□□ 0.7
BRCA2-204ENST00000530893 H7C1D1 291 aa19.42■□□□□ 0.7
BRCA2-204ENST00000530893 FECHP22830 423 aa19.42■□□□□ 0.7
BRCA2-204ENST00000530893 NAPAP54920 295 aa19.42■□□□□ 0.7
BRCA2-204ENST00000530893 ELF2Q15723 593 aa19.42■□□□□ 0.7
BRCA2-204ENST00000530893 GTPBP4Q9BZE4 634 aaKnown RBP19.42■□□□□ 0.7
BRCA2-204ENST00000530893 ESYT2A0FGR8 921 aa19.41■□□□□ 0.7
BRCA2-204ENST00000530893 MFAP3LO75121 409 aa19.41■□□□□ 0.7
BRCA2-204ENST00000530893 RBL2Q08999 1139 aa19.41■□□□□ 0.7
BRCA2-204ENST00000530893 NONOQ15233 471 aaKnown RBP eCLIP19.41■□□□□ 0.7
BRCA2-204ENST00000530893 NAALADL2Q58DX5 795 aa19.41■□□□□ 0.7
BRCA2-204ENST00000530893 TOGARAM2Q6ZUX3 1019 aa19.41■□□□□ 0.7
BRCA2-204ENST00000530893 FBXO41Q8TF61 875 aa19.41■□□□□ 0.7
BRCA2-204ENST00000530893 NELFBQ8WX92 580 aa19.41■□□□□ 0.7
BRCA2-204ENST00000530893 KBTBD4Q9NVX7 518 aa19.41■□□□□ 0.7
BRCA2-204ENST00000530893 KRT31Q15323 416 aa19.41■□□□□ 0.7
BRCA2-204ENST00000530893 TCP11X2Q5H9J9 407 aa19.41■□□□□ 0.7
BRCA2-204ENST00000530893 RASSF8Q8NHQ8 419 aa19.41■□□□□ 0.7
BRCA2-204ENST00000530893 TMEM60Q9H2L4 133 aa19.41■□□□□ 0.7
BRCA2-204ENST00000530893 POLLQ9UGP5 575 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms