RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 RASGRP2Q7LDG7 609 aa18.73■□□□□ 0.59
BRK1-201ENST00000530758 MB21D1Q8N884 522 aa18.73■□□□□ 0.59
BRK1-201ENST00000530758 ZNF296Q8WUU4 475 aaPredicted RBP18.73■□□□□ 0.59
BRK1-201ENST00000530758 BRF1Q92994 677 aa18.73■□□□□ 0.59
BRK1-201ENST00000530758 FBXO28Q9NVF7 368 aa18.73■□□□□ 0.59
BRK1-201ENST00000530758 RABGAP1Q9Y3P9 1069 aa18.73■□□□□ 0.59
BRK1-201ENST00000530758 NID2Q14112 1375 aa18.72■□□□□ 0.59
BRK1-201ENST00000530758 VWA5AO00534 786 aa18.72■□□□□ 0.59
BRK1-201ENST00000530758 TTBK2Q6IQ55 1244 aa18.72■□□□□ 0.59
BRK1-201ENST00000530758 NFXL1Q6ZNB6 911 aa18.72■□□□□ 0.59
BRK1-201ENST00000530758 REPS2Q8NFH8 660 aa18.72■□□□□ 0.59
BRK1-201ENST00000530758 SMCR8Q8TEV9 937 aaPredicted RBP18.72■□□□□ 0.59
BRK1-201ENST00000530758 ZNF274Q96GC6 653 aaPredicted RBP18.72■□□□□ 0.59
BRK1-201ENST00000530758 GPR25O00155 361 aa18.71■□□□□ 0.59
BRK1-201ENST00000530758 ATP2A1O14983 1001 aa18.71■□□□□ 0.59
BRK1-201ENST00000530758 CNMDO75829 334 aa18.71■□□□□ 0.59
BRK1-201ENST00000530758 NEK4P51957 841 aa18.71■□□□□ 0.59
BRK1-201ENST00000530758 FGD1P98174 961 aa18.71■□□□□ 0.59
BRK1-201ENST00000530758 RABEP1Q15276 862 aa18.71■□□□□ 0.59
BRK1-201ENST00000530758 ANKRD1Q15327 319 aa18.71■□□□□ 0.59
BRK1-201ENST00000530758 FAM110CQ1W6H9 321 aa18.71■□□□□ 0.59
BRK1-201ENST00000530758 SYNE3Q6ZMZ3 975 aa18.71■□□□□ 0.59
BRK1-201ENST00000530758 STAG2Q8N3U4 1231 aa18.71■□□□□ 0.59
BRK1-201ENST00000530758 FANCBQ8NB91 859 aa18.71■□□□□ 0.59
BRK1-201ENST00000530758 ATG4CQ96DT6 458 aa18.71■□□□□ 0.59
BRK1-201ENST00000530758 SLC38A10Q9HBR0 1119 aa18.71■□□□□ 0.59
BRK1-201ENST00000530758 PRR12Q9ULL5 1215 aa18.71■□□□□ 0.59
BRK1-201ENST00000530758 KLF18A0A0U1RQI7 1052 aa18.7■□□□□ 0.58
BRK1-201ENST00000530758 KLRF2D3W0D1 207 aa18.7■□□□□ 0.58
BRK1-201ENST00000530758 GOLGA8HP0CJ92 632 aa18.7■□□□□ 0.58
BRK1-201ENST00000530758 KIF5BP33176 963 aa18.7■□□□□ 0.58
BRK1-201ENST00000530758 OAZ1P54368 228 aa18.7■□□□□ 0.58
BRK1-201ENST00000530758 APOBRQ0VD83 1088 aa18.7■□□□□ 0.58
BRK1-201ENST00000530758 CCDC96Q2M329 555 aa18.7■□□□□ 0.58
BRK1-201ENST00000530758 LZTS2Q9BRK4 669 aa18.7■□□□□ 0.58
BRK1-201ENST00000530758 TXNRD2Q9NNW7 524 aa18.7■□□□□ 0.58
BRK1-201ENST00000530758 GPCPD1Q9NPB8 672 aa18.7■□□□□ 0.58
BRK1-201ENST00000530758 MTMR7Q9Y216 660 aa18.7■□□□□ 0.58
BRK1-201ENST00000530758 FRMPD2Q68DX3 1309 aaPredicted RBP18.7■□□□□ 0.58
BRK1-201ENST00000530758 MGAMO43451 1857 aa18.69■□□□□ 0.58
BRK1-201ENST00000530758 ZBTB43O43298 467 aa18.69■□□□□ 0.58
BRK1-201ENST00000530758 PDIA3P30101 505 aaKnown RBP18.69■□□□□ 0.58
BRK1-201ENST00000530758 GNAQP50148 359 aa18.69■□□□□ 0.58
BRK1-201ENST00000530758 AK2P54819 239 aa18.69■□□□□ 0.58
BRK1-201ENST00000530758 Q3C1V9 767 aa18.69■□□□□ 0.58
BRK1-201ENST00000530758 SYDE2Q5VT97 1194 aa18.69■□□□□ 0.58
BRK1-201ENST00000530758 CTCFLQ8NI51 663 aaPredicted RBP18.69■□□□□ 0.58
BRK1-201ENST00000530758 NUP133Q8WUM0 1156 aa18.69■□□□□ 0.58
BRK1-201ENST00000530758 KIFC2Q96AC6 838 aa18.69■□□□□ 0.58
BRK1-201ENST00000530758 MTMR8Q96EF0 704 aa18.69■□□□□ 0.58
BRK1-201ENST00000530758 MYL10Q9BUA6 226 aa18.69■□□□□ 0.58
BRK1-201ENST00000530758 RANBP17Q9H2T7 1088 aaKnown RBP18.69■□□□□ 0.58
BRK1-201ENST00000530758 RIOX1Q9H6W3 641 aa18.69■□□□□ 0.58
BRK1-201ENST00000530758 FAM217BQ9NTX9 383 aaPredicted RBP18.69■□□□□ 0.58
BRK1-201ENST00000530758 BTBD7Q9P203 1132 aa18.69■□□□□ 0.58
BRK1-201ENST00000530758 CPA4Q9UI42 421 aa18.69■□□□□ 0.58
BRK1-201ENST00000530758 ZNF214Q9UL59 606 aaPredicted RBP18.69■□□□□ 0.58
BRK1-201ENST00000530758 HPS5Q9UPZ3 1129 aa18.69■□□□□ 0.58
BRK1-201ENST00000530758 ERVK-9P63128 1117 aa18.68■□□□□ 0.58
BRK1-201ENST00000530758 ERVK-24P63145 666 aa18.68■□□□□ 0.58
BRK1-201ENST00000530758 SP3Q02447 781 aa18.68■□□□□ 0.58
BRK1-201ENST00000530758 TMEM132BQ14DG7 1078 aa18.68■□□□□ 0.58
BRK1-201ENST00000530758 ANKRD13CQ8N6S4 541 aa18.68■□□□□ 0.58
BRK1-201ENST00000530758 GPRC5AQ8NFJ5 357 aa18.68■□□□□ 0.58
BRK1-201ENST00000530758 CHMP4CQ96CF2 233 aa18.68■□□□□ 0.58
BRK1-201ENST00000530758 RBM28Q9NW13 759 aaKnown RBP18.68■□□□□ 0.58
BRK1-201ENST00000530758 MYH6P13533 1939 aa18.68■□□□□ 0.58
BRK1-201ENST00000530758 ZBED4O75132 1171 aa18.67■□□□□ 0.58
BRK1-201ENST00000530758 SLC16A2P36021 539 aa18.67■□□□□ 0.58
BRK1-201ENST00000530758 CAP1Q01518 475 aa18.67■□□□□ 0.58
BRK1-201ENST00000530758 SLC35G1Q2M3R5 365 aa18.67■□□□□ 0.58
BRK1-201ENST00000530758 CTU1Q7Z7A3 348 aaKnown RBP18.67■□□□□ 0.58
BRK1-201ENST00000530758 ADGRF4Q8IZF3 695 aa18.67■□□□□ 0.58
BRK1-201ENST00000530758 SPZ1Q9BXG8 430 aa18.67■□□□□ 0.58
BRK1-201ENST00000530758 UBA5Q9GZZ9 404 aa18.67■□□□□ 0.58
BRK1-201ENST00000530758 SMCHD1A6NHR9 2005 aa18.67■□□□□ 0.58
BRK1-201ENST00000530758 ZNF536O15090 1300 aa18.67■□□□□ 0.58
BRK1-201ENST00000530758 BAZ2BQ9UIF8 2168 aaKnown RBP18.66■□□□□ 0.58
BRK1-201ENST00000530758 CCDC196A0A1B0GTZ2 297 aa18.66■□□□□ 0.58
BRK1-201ENST00000530758 CYTH3O43739 400 aa18.66■□□□□ 0.58
BRK1-201ENST00000530758 NBPF11Q86T75 865 aa18.66■□□□□ 0.58
BRK1-201ENST00000530758 MICU3Q86XE3 530 aa18.66■□□□□ 0.58
BRK1-201ENST00000530758 SHCBP1Q8NEM2 672 aa18.66■□□□□ 0.58
BRK1-201ENST00000530758 SPATC1LQ9H0A9 340 aa18.66■□□□□ 0.58
BRK1-201ENST00000530758 JMJD4Q9H9V9 463 aa18.66■□□□□ 0.58
BRK1-201ENST00000530758 PNMA2Q9UL42 364 aa18.66■□□□□ 0.58
BRK1-201ENST00000530758 FKTNO75072 461 aa18.65■□□□□ 0.58
BRK1-201ENST00000530758 RXRAP19793 462 aa18.65■□□□□ 0.58
BRK1-201ENST00000530758 CDC27P30260 824 aa18.65■□□□□ 0.58
BRK1-201ENST00000530758 STAT3P40763 770 aa18.65■□□□□ 0.58
BRK1-201ENST00000530758 CCNA1P78396 465 aa18.65■□□□□ 0.58
BRK1-201ENST00000530758 LACTBP83111 547 aaPredicted RBP18.65■□□□□ 0.58
BRK1-201ENST00000530758 FUT2Q10981 343 aa18.65■□□□□ 0.58
BRK1-201ENST00000530758 IKQ13123 557 aaPredicted RBP18.65■□□□□ 0.58
BRK1-201ENST00000530758 RTN1Q16799 776 aa18.65■□□□□ 0.58
BRK1-201ENST00000530758 TMTC3Q6ZXV5 915 aa18.65■□□□□ 0.58
BRK1-201ENST00000530758 RIOX2Q8IUF8 465 aa18.65■□□□□ 0.58
BRK1-201ENST00000530758 SRBD1Q8N5C6 995 aaKnown RBP18.65■□□□□ 0.58
BRK1-201ENST00000530758 CPVLQ9H3G5 476 aa18.65■□□□□ 0.58
BRK1-201ENST00000530758 TPCN1Q9ULQ1 816 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms