RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 MCAMP43121 646 aa13.11□□□□□ -0.31
TRIM3-210ENST00000530724 SETQ01105 290 aaPredicted RBP13.11□□□□□ -0.31
TRIM3-210ENST00000530724 TCIRG1Q13488 830 aa13.11□□□□□ -0.31
TRIM3-210ENST00000530724 NKX1-1Q15270 411 aaPredicted RBP13.11□□□□□ -0.31
TRIM3-210ENST00000530724 SEC23AQ15436 765 aa13.11□□□□□ -0.31
TRIM3-210ENST00000530724 PREPLQ4J6C6 727 aaPredicted RBP13.11□□□□□ -0.31
TRIM3-210ENST00000530724 CCDC122Q5T0U0 273 aa13.11□□□□□ -0.31
TRIM3-210ENST00000530724 PPP4R3AQ6IN85 833 aa13.11□□□□□ -0.31
TRIM3-210ENST00000530724 LRIG3Q6UXM1 1119 aa13.11□□□□□ -0.31
TRIM3-210ENST00000530724 DHTKD1Q96HY7 919 aaPredicted RBP13.11□□□□□ -0.31
TRIM3-210ENST00000530724 CHP1Q99653 195 aa13.11□□□□□ -0.31
TRIM3-210ENST00000530724 PUS3Q9BZE2 481 aaKnown RBP13.11□□□□□ -0.31
TRIM3-210ENST00000530724 CUEDC2Q9H467 287 aa13.11□□□□□ -0.31
TRIM3-210ENST00000530724 RBM28Q9NW13 759 aaKnown RBP13.11□□□□□ -0.31
TRIM3-210ENST00000530724 CEP83Q9Y592 693 aa13.11□□□□□ -0.31
TRIM3-210ENST00000530724 TNS3Q68CZ2 1445 aa13.11□□□□□ -0.31
TRIM3-210ENST00000530724 BHMG1C9JSJ3 638 aaPredicted RBP13.1□□□□□ -0.31
TRIM3-210ENST00000530724 PDE2AO00408 941 aaPredicted RBP13.1□□□□□ -0.31
TRIM3-210ENST00000530724 CES2O00748 559 aa13.1□□□□□ -0.31
TRIM3-210ENST00000530724 TACC1O75410 805 aa13.1□□□□□ -0.31
TRIM3-210ENST00000530724 RASSF9O75901 435 aa13.1□□□□□ -0.31
TRIM3-210ENST00000530724 PARP1P09874 1014 aaKnown RBP13.1□□□□□ -0.31
TRIM3-210ENST00000530724 CALM1P0DP23 149 aa13.1□□□□□ -0.31
TRIM3-210ENST00000530724 CALM2P0DP24 149 aa13.1□□□□□ -0.31
TRIM3-210ENST00000530724 CALM3P0DP25 149 aa13.1□□□□□ -0.31
TRIM3-210ENST00000530724 MYBL2P10244 700 aa13.1□□□□□ -0.31
TRIM3-210ENST00000530724 GUCY1A2P33402 732 aa13.1□□□□□ -0.31
TRIM3-210ENST00000530724 PKN1Q16512 942 aa13.1□□□□□ -0.31
TRIM3-210ENST00000530724 SPECC1Q5M775 1068 aa13.1□□□□□ -0.31
TRIM3-210ENST00000530724 C6orf89Q6UWU4 347 aa13.1□□□□□ -0.31
TRIM3-210ENST00000530724 ARMC9Q7Z3E5 817 aa13.1□□□□□ -0.31
TRIM3-210ENST00000530724 ANKRD18AQ8IVF6 992 aa13.1□□□□□ -0.31
TRIM3-210ENST00000530724 IFNL3Q8IZI9 196 aa13.1□□□□□ -0.31
TRIM3-210ENST00000530724 RNF10Q8N5U6 811 aaKnown RBP13.1□□□□□ -0.31
TRIM3-210ENST00000530724 NKX2-3Q8TAU0 364 aa13.1□□□□□ -0.31
TRIM3-210ENST00000530724 CPLX3Q8WVH0 158 aa13.1□□□□□ -0.31
TRIM3-210ENST00000530724 NELFBQ8WX92 580 aa13.1□□□□□ -0.31
TRIM3-210ENST00000530724 EPN3Q9H201 632 aa13.1□□□□□ -0.31
TRIM3-210ENST00000530724 EPB41L4AQ9HCS5 686 aaPredicted RBP13.1□□□□□ -0.31
TRIM3-210ENST00000530724 GDF3Q9NR23 364 aa13.1□□□□□ -0.31
TRIM3-210ENST00000530724 GUCA1BQ9UMX6 200 aa13.1□□□□□ -0.31
TRIM3-210ENST00000530724 CTNND2Q9UQB3 1225 aa13.1□□□□□ -0.31
TRIM3-210ENST00000530724 ADAMTSL3P82987 1691 aa13.09□□□□□ -0.31
TRIM3-210ENST00000530724 DOCK2Q92608 1830 aa13.09□□□□□ -0.31
TRIM3-210ENST00000530724 GRID2IPA4D2P6 1211 aa13.09□□□□□ -0.31
TRIM3-210ENST00000530724 TULP1O00294 542 aaPredicted RBP13.09□□□□□ -0.31
TRIM3-210ENST00000530724 CYP27B1O15528 508 aa13.09□□□□□ -0.31
TRIM3-210ENST00000530724 KIAA0754O94854 1291 aa13.09□□□□□ -0.31
TRIM3-210ENST00000530724 RHOBTB3O94955 611 aa13.09□□□□□ -0.31
TRIM3-210ENST00000530724 IPO7O95373 1038 aaKnown RBP13.09□□□□□ -0.31
TRIM3-210ENST00000530724 RPN1P04843 607 aaKnown RBP13.09□□□□□ -0.31
TRIM3-210ENST00000530724 FGFR2P21802 821 aa13.09□□□□□ -0.31
TRIM3-210ENST00000530724 MRPL12P52815 198 aaKnown RBP13.09□□□□□ -0.31
TRIM3-210ENST00000530724 NAP1L1P55209 391 aaKnown RBP13.09□□□□□ -0.31
TRIM3-210ENST00000530724 GNGT1P63211 74 aa13.09□□□□□ -0.31
TRIM3-210ENST00000530724 ACTN3Q08043 901 aaPredicted RBP13.09□□□□□ -0.31
TRIM3-210ENST00000530724 NR5A1Q13285 461 aa13.09□□□□□ -0.31
TRIM3-210ENST00000530724 WTAPQ15007 396 aa13.09□□□□□ -0.31
TRIM3-210ENST00000530724 NPY5RQ15761 445 aa13.09□□□□□ -0.31
TRIM3-210ENST00000530724 HSP90AA4PQ58FG1 418 aa13.09□□□□□ -0.31
TRIM3-210ENST00000530724 FAM114A1Q8IWE2 563 aa13.09□□□□□ -0.31
TRIM3-210ENST00000530724 ZNF654Q8IZM8 581 aa13.09□□□□□ -0.31
TRIM3-210ENST00000530724 ZBTB38Q8NAP3 1195 aaPredicted RBP13.09□□□□□ -0.31
TRIM3-210ENST00000530724 SPATA4Q8NEY3 305 aa13.09□□□□□ -0.31
TRIM3-210ENST00000530724 SECISBP2LQ93073 1101 aaKnown RBP13.09□□□□□ -0.31
TRIM3-210ENST00000530724 EPSTI1Q96J88 318 aa13.09□□□□□ -0.31
TRIM3-210ENST00000530724 MTRQ99707 1265 aa13.09□□□□□ -0.31
TRIM3-210ENST00000530724 VCPKMTQ9H867 229 aa13.09□□□□□ -0.31
TRIM3-210ENST00000530724 CABP5Q9NP86 173 aa13.09□□□□□ -0.31
TRIM3-210ENST00000530724 PIH1D3Q9NQM4 214 aaKnown RBP13.09□□□□□ -0.31
TRIM3-210ENST00000530724 STIM2Q9P246 746 aa13.09□□□□□ -0.31
TRIM3-210ENST00000530724 HYOU1Q9Y4L1 999 aa13.09□□□□□ -0.31
TRIM3-210ENST00000530724 ATP8B3O60423 1300 aa13.09□□□□□ -0.31
TRIM3-210ENST00000530724 ZNF532Q9HCE3 1301 aa13.09□□□□□ -0.31
TRIM3-210ENST00000530724 LOC102724159A0A0B4J2E5 919 aa13.08□□□□□ -0.32
TRIM3-210ENST00000530724 NUTM2BA6NNL0 878 aaPredicted RBP13.08□□□□□ -0.32
TRIM3-210ENST00000530724 GSG1L2A8MUP6 293 aa13.08□□□□□ -0.32
TRIM3-210ENST00000530724 NUTM2EB1AL46 878 aaPredicted RBP13.08□□□□□ -0.32
TRIM3-210ENST00000530724 HMGB1P1B2RPK0 211 aaPredicted RBP13.08□□□□□ -0.32
TRIM3-210ENST00000530724 RBAK-RBAKDNI3L0D1 243 aa13.08□□□□□ -0.32
TRIM3-210ENST00000530724 USO1O60763 962 aaKnown RBP13.08□□□□□ -0.32
TRIM3-210ENST00000530724 HSF2BPO75031 334 aa13.08□□□□□ -0.32
TRIM3-210ENST00000530724 DDAH1O94760 285 aa13.08□□□□□ -0.32
TRIM3-210ENST00000530724 TFRCP02786 760 aaKnown RBP13.08□□□□□ -0.32
TRIM3-210ENST00000530724 PAEPP09466 180 aa13.08□□□□□ -0.32
TRIM3-210ENST00000530724 LIG3P49916 1009 aa13.08□□□□□ -0.32
TRIM3-210ENST00000530724 LMNB2Q03252 620 aa13.08□□□□□ -0.32
TRIM3-210ENST00000530724 UBXN1Q04323 297 aa13.08□□□□□ -0.32
TRIM3-210ENST00000530724 KIF5AQ12840 1032 aa13.08□□□□□ -0.32
TRIM3-210ENST00000530724 IFIT5Q13325 482 aaKnown RBP13.08□□□□□ -0.32
TRIM3-210ENST00000530724 PWP2Q15269 919 aaKnown RBP13.08□□□□□ -0.32
TRIM3-210ENST00000530724 LACTB2Q53H82 288 aaPredicted RBP13.08□□□□□ -0.32
TRIM3-210ENST00000530724 RRAGBQ5VZM2 374 aa13.08□□□□□ -0.32
TRIM3-210ENST00000530724 TTI2Q6NXR4 508 aa13.08□□□□□ -0.32
TRIM3-210ENST00000530724 MFSD6Q6ZSS7 791 aa13.08□□□□□ -0.32
TRIM3-210ENST00000530724 TTLL7Q6ZT98 887 aa13.08□□□□□ -0.32
TRIM3-210ENST00000530724 GIMAP8Q8ND71 665 aaPredicted RBP13.08□□□□□ -0.32
TRIM3-210ENST00000530724 TTLL11Q8NHH1 800 aa13.08□□□□□ -0.32
TRIM3-210ENST00000530724 OXER1Q8TDS5 423 aa13.08□□□□□ -0.32
TRIM3-210ENST00000530724 WHAMMQ8TF30 809 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms