RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 SLC16A2P36021 539 aa24.91■■□□□ 1.58
CAPN1-220ENST00000530567 CTCFP49711 727 aaPredicted RBP24.91■■□□□ 1.58
CAPN1-220ENST00000530567 SAMD1Q6SPF0 538 aaPredicted RBP24.91■■□□□ 1.58
CAPN1-220ENST00000530567 PRPF38AQ8NAV1 312 aaKnown RBP24.91■■□□□ 1.58
CAPN1-220ENST00000530567 KIFC2Q96AC6 838 aa24.91■■□□□ 1.58
CAPN1-220ENST00000530567 RABGAP1Q9Y3P9 1069 aa24.91■■□□□ 1.58
CAPN1-220ENST00000530567 PARP1P09874 1014 aaKnown RBP24.9■■□□□ 1.58
CAPN1-220ENST00000530567 RAB11FIP4Q86YS3 637 aa24.9■■□□□ 1.58
CAPN1-220ENST00000530567 CHURC1Q8WUH1 139 aa24.9■■□□□ 1.58
CAPN1-220ENST00000530567 ZNF296Q8WUU4 475 aaPredicted RBP24.9■■□□□ 1.58
CAPN1-220ENST00000530567 MAP3K14Q99558 947 aa24.9■■□□□ 1.58
CAPN1-220ENST00000530567 PAGR1Q9BTK6 254 aa24.9■■□□□ 1.58
CAPN1-220ENST00000530567 CPVLQ9H3G5 476 aa24.9■■□□□ 1.58
CAPN1-220ENST00000530567 PDRG1Q9NUG6 133 aa24.9■■□□□ 1.58
CAPN1-220ENST00000530567 PRR12Q9ULL5 1215 aa24.9■■□□□ 1.58
CAPN1-220ENST00000530567 SLC12A7Q9Y666 1083 aa24.9■■□□□ 1.58
CAPN1-220ENST00000530567 ZSWIM8A7E2V4 1837 aa24.9■■□□□ 1.58
CAPN1-220ENST00000530567 KLF18A0A0U1RQI7 1052 aa24.89■■□□□ 1.58
CAPN1-220ENST00000530567 RXRAP19793 462 aa24.89■■□□□ 1.58
CAPN1-220ENST00000530567 FGD1P98174 961 aa24.89■■□□□ 1.58
CAPN1-220ENST00000530567 CAP1Q01518 475 aa24.89■■□□□ 1.58
CAPN1-220ENST00000530567 APOBRQ0VD83 1088 aa24.89■■□□□ 1.58
CAPN1-220ENST00000530567 SLC35G1Q2M3R5 365 aa24.89■■□□□ 1.58
CAPN1-220ENST00000530567 MB21D1Q8N884 522 aa24.89■■□□□ 1.58
CAPN1-220ENST00000530567 NUP133Q8WUM0 1156 aa24.89■■□□□ 1.58
CAPN1-220ENST00000530567 LBX1P52954 281 aa24.88■■□□□ 1.57
CAPN1-220ENST00000530567 EVCP57679 992 aa24.88■■□□□ 1.57
CAPN1-220ENST00000530567 ERVK-9P63128 1117 aa24.88■■□□□ 1.57
CAPN1-220ENST00000530567 ERVK-24P63145 666 aa24.88■■□□□ 1.57
CAPN1-220ENST00000530567 SP3Q02447 781 aa24.88■■□□□ 1.57
CAPN1-220ENST00000530567 IKQ13123 557 aaPredicted RBP24.88■■□□□ 1.57
CAPN1-220ENST00000530567 TMEM132BQ14DG7 1078 aa24.88■■□□□ 1.57
CAPN1-220ENST00000530567 Q3C1V9 767 aa24.88■■□□□ 1.57
CAPN1-220ENST00000530567 SYDE2Q5VT97 1194 aa24.88■■□□□ 1.57
CAPN1-220ENST00000530567 MICU3Q86XE3 530 aa24.88■■□□□ 1.57
CAPN1-220ENST00000530567 UBA5Q9GZZ9 404 aa24.88■■□□□ 1.57
CAPN1-220ENST00000530567 SLC38A10Q9HBR0 1119 aa24.88■■□□□ 1.57
CAPN1-220ENST00000530567 ZNF214Q9UL59 606 aaPredicted RBP24.88■■□□□ 1.57
CAPN1-220ENST00000530567 FKTNO75072 461 aa24.87■■□□□ 1.57
CAPN1-220ENST00000530567 GPRC5AQ8NFJ5 357 aa24.87■■□□□ 1.57
CAPN1-220ENST00000530567 ALDH8A1Q9H2A2 487 aaPredicted RBP24.87■■□□□ 1.57
CAPN1-220ENST00000530567 CASP8AP2Q9UKL3 1982 aa24.87■■□□□ 1.57
CAPN1-220ENST00000530567 KLRF2D3W0D1 207 aa24.86■■□□□ 1.57
CAPN1-220ENST00000530567 CTGFP29279 349 aa24.86■■□□□ 1.57
CAPN1-220ENST00000530567 HPS5Q9UPZ3 1129 aa24.86■■□□□ 1.57
CAPN1-220ENST00000530567 NID2Q14112 1375 aa24.86■■□□□ 1.57
CAPN1-220ENST00000530567 ZBTB43O43298 467 aa24.86■■□□□ 1.57
CAPN1-220ENST00000530567 CALM1P0DP23 149 aa24.86■■□□□ 1.57
CAPN1-220ENST00000530567 CALM2P0DP24 149 aa24.86■■□□□ 1.57
CAPN1-220ENST00000530567 CALM3P0DP25 149 aa24.86■■□□□ 1.57
CAPN1-220ENST00000530567 RCAN1P53805 252 aa24.86■■□□□ 1.57
CAPN1-220ENST00000530567 SNAP25P60880 206 aa24.86■■□□□ 1.57
CAPN1-220ENST00000530567 LACTBP83111 547 aaPredicted RBP24.86■■□□□ 1.57
CAPN1-220ENST00000530567 NBPF11Q86T75 865 aa24.86■■□□□ 1.57
CAPN1-220ENST00000530567 CCDC144CPQ8IYA2 1237 aa24.86■■□□□ 1.57
CAPN1-220ENST00000530567 CTCFLQ8NI51 663 aaPredicted RBP24.86■■□□□ 1.57
CAPN1-220ENST00000530567 RANBP17Q9H2T7 1088 aaKnown RBP24.86■■□□□ 1.57
CAPN1-220ENST00000530567 MGAMO43451 1857 aa24.85■■□□□ 1.57
CAPN1-220ENST00000530567 ZNF536O15090 1300 aa24.85■■□□□ 1.57
CAPN1-220ENST00000530567 GOLGA8BA8MQT2 603 aa24.85■■□□□ 1.57
CAPN1-220ENST00000530567 NEK4P51957 841 aa24.85■■□□□ 1.57
CAPN1-220ENST00000530567 AK2P54819 239 aa24.85■■□□□ 1.57
CAPN1-220ENST00000530567 FANCBQ8NB91 859 aa24.85■■□□□ 1.57
CAPN1-220ENST00000530567 CD99L2Q8TCZ2 262 aa24.85■■□□□ 1.57
CAPN1-220ENST00000530567 LARP6Q9BRS8 491 aaKnown RBP24.85■■□□□ 1.57
CAPN1-220ENST00000530567 ARHGAP39Q9C0H5 1083 aa24.85■■□□□ 1.57
CAPN1-220ENST00000530567 SPATC1LQ9H0A9 340 aa24.85■■□□□ 1.57
CAPN1-220ENST00000530567 ATP2A1O14983 1001 aa24.84■■□□□ 1.57
CAPN1-220ENST00000530567 CYTH3O43739 400 aa24.84■■□□□ 1.57
CAPN1-220ENST00000530567 FDX1P10109 184 aa24.84■■□□□ 1.57
CAPN1-220ENST00000530567 KIF5BP33176 963 aa24.84■■□□□ 1.57
CAPN1-220ENST00000530567 SYNE3Q6ZMZ3 975 aa24.84■■□□□ 1.57
CAPN1-220ENST00000530567 ADGRF4Q8IZF3 695 aa24.84■■□□□ 1.57
CAPN1-220ENST00000530567 MOV10L1Q9BXT6 1211 aaKnown RBP24.84■■□□□ 1.57
CAPN1-220ENST00000530567 PORCNQ9H237 461 aa24.84■■□□□ 1.57
CAPN1-220ENST00000530567 FAM217BQ9NTX9 383 aaPredicted RBP24.84■■□□□ 1.57
CAPN1-220ENST00000530567 ZBED4O75132 1171 aa24.83■■□□□ 1.57
CAPN1-220ENST00000530567 PLEKHA8P1O95397 391 aa24.83■■□□□ 1.57
CAPN1-220ENST00000530567 GOLGA8AA7E2F4 631 aa24.82■■□□□ 1.56
CAPN1-220ENST00000530567 PDIA3P30101 505 aaKnown RBP24.82■■□□□ 1.56
CAPN1-220ENST00000530567 OAZ1P54368 228 aa24.82■■□□□ 1.56
CAPN1-220ENST00000530567 RTN1Q16799 776 aa24.82■■□□□ 1.56
CAPN1-220ENST00000530567 TMTC3Q6ZXV5 915 aa24.82■■□□□ 1.56
CAPN1-220ENST00000530567 MTMR8Q96EF0 704 aa24.82■■□□□ 1.56
CAPN1-220ENST00000530567 TEX13BQ9BXU2 312 aa24.82■■□□□ 1.56
CAPN1-220ENST00000530567 RIOX1Q9H6W3 641 aa24.82■■□□□ 1.56
CAPN1-220ENST00000530567 JMJD4Q9H9V9 463 aa24.82■■□□□ 1.56
CAPN1-220ENST00000530567 RAVER2Q9HCJ3 691 aaKnown RBP24.82■■□□□ 1.56
CAPN1-220ENST00000530567 BAZ2BQ9UIF8 2168 aaKnown RBP24.82■■□□□ 1.56
CAPN1-220ENST00000530567 CDC27P30260 824 aa24.81■■□□□ 1.56
CAPN1-220ENST00000530567 PLS1Q14651 629 aa24.81■■□□□ 1.56
CAPN1-220ENST00000530567 RABEP1Q15276 862 aa24.81■■□□□ 1.56
CAPN1-220ENST00000530567 RIOX2Q8IUF8 465 aa24.81■■□□□ 1.56
CAPN1-220ENST00000530567 CPXCR1Q8N123 301 aa24.81■■□□□ 1.56
CAPN1-220ENST00000530567 SRBD1Q8N5C6 995 aaKnown RBP24.81■■□□□ 1.56
CAPN1-220ENST00000530567 ERO1AQ96HE7 468 aa24.81■■□□□ 1.56
CAPN1-220ENST00000530567 TRIM47Q96LD4 638 aa24.81■■□□□ 1.56
CAPN1-220ENST00000530567 EFCC1Q9HA90 598 aa24.81■■□□□ 1.56
CAPN1-220ENST00000530567 NAP1L2Q9ULW6 460 aaPredicted RBP24.81■■□□□ 1.56
CAPN1-220ENST00000530567 SMCHD1A6NHR9 2005 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms