RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 LRRC47Q8N1G4 583 aaKnown RBP24.76■■□□□ 1.55
TSPAN4-219ENST00000530404 BADQ92934 168 aa24.76■■□□□ 1.55
TSPAN4-219ENST00000530404 KIFC2Q96AC6 838 aa24.76■■□□□ 1.55
TSPAN4-219ENST00000530404 CEP95Q96GE4 821 aa24.76■■□□□ 1.55
TSPAN4-219ENST00000530404 TEX13BQ9BXU2 312 aa24.76■■□□□ 1.55
TSPAN4-219ENST00000530404 PCDHB15Q9Y5E8 787 aa24.76■■□□□ 1.55
TSPAN4-219ENST00000530404 PATL2C9JE40 543 aaKnown RBP24.75■■□□□ 1.55
TSPAN4-219ENST00000530404 GNAT2P19087 354 aa24.75■■□□□ 1.55
TSPAN4-219ENST00000530404 COPB2P35606 906 aa24.75■■□□□ 1.55
TSPAN4-219ENST00000530404 CHMP4CQ96CF2 233 aa24.75■■□□□ 1.55
TSPAN4-219ENST00000530404 FAM161BQ96MY7 647 aa24.75■■□□□ 1.55
TSPAN4-219ENST00000530404 RAVER2Q9HCJ3 691 aaKnown RBP24.75■■□□□ 1.55
TSPAN4-219ENST00000530404 NRBP1Q9UHY1 535 aa24.75■■□□□ 1.55
TSPAN4-219ENST00000530404 STXBP5LQ9Y2K9 1186 aa24.75■■□□□ 1.55
TSPAN4-219ENST00000530404 LCTP09848 1927 aa24.74■■□□□ 1.55
TSPAN4-219ENST00000530404 TRIM43BA6NCK2 446 aa24.74■■□□□ 1.55
TSPAN4-219ENST00000530404 DLL1O00548 723 aa24.74■■□□□ 1.55
TSPAN4-219ENST00000530404 SHHQ15465 462 aa24.74■■□□□ 1.55
TSPAN4-219ENST00000530404 C9orf50Q5SZB4 431 aa24.74■■□□□ 1.55
TSPAN4-219ENST00000530404 PRPF38AQ8NAV1 312 aaKnown RBP24.74■■□□□ 1.55
TSPAN4-219ENST00000530404 PI4K2BQ8TCG2 481 aa24.74■■□□□ 1.55
TSPAN4-219ENST00000530404 TRIM43Q96BQ3 446 aaPredicted RBP24.74■■□□□ 1.55
TSPAN4-219ENST00000530404 PHF24Q9UPV7 400 aa24.74■■□□□ 1.55
TSPAN4-219ENST00000530404 AKR1A1P14550 325 aa24.73■■□□□ 1.55
TSPAN4-219ENST00000530404 TLE2Q04725 743 aa24.73■■□□□ 1.55
TSPAN4-219ENST00000530404 RNF180Q86T96 592 aa24.73■■□□□ 1.55
TSPAN4-219ENST00000530404 DDX11Q96FC9 970 aa24.73■■□□□ 1.55
TSPAN4-219ENST00000530404 FSD1Q9BTV5 496 aa24.73■■□□□ 1.55
TSPAN4-219ENST00000530404 MTMR4Q9NYA4 1195 aa24.73■■□□□ 1.55
TSPAN4-219ENST00000530404 CTDP1Q9Y5B0 961 aaPredicted RBP24.73■■□□□ 1.55
TSPAN4-219ENST00000530404 PRUNE2Q8WUY3 3088 aa24.73■■□□□ 1.55
TSPAN4-219ENST00000530404 LRRC37A2A6NM11 1700 aa24.72■■□□□ 1.55
TSPAN4-219ENST00000530404 CDH23Q9H251 3354 aa24.72■■□□□ 1.55
TSPAN4-219ENST00000530404 TTC41PQ6P2S7 1318 aa24.72■■□□□ 1.55
TSPAN4-219ENST00000530404 A0A1W2PQ45 241 aaPredicted RBP24.72■■□□□ 1.55
TSPAN4-219ENST00000530404 A0A1W2PQY0 241 aa24.72■■□□□ 1.55
TSPAN4-219ENST00000530404 ZBED4O75132 1171 aa24.72■■□□□ 1.55
TSPAN4-219ENST00000530404 SNAI1O95863 264 aaPredicted RBP24.72■■□□□ 1.55
TSPAN4-219ENST00000530404 ZHX1Q9UKY1 873 aaPredicted RBP24.72■■□□□ 1.55
TSPAN4-219ENST00000530404 CNPY2Q9Y2B0 182 aa24.72■■□□□ 1.55
TSPAN4-219ENST00000530404 POTEB2H3BUK9 544 aa24.71■■□□□ 1.55
TSPAN4-219ENST00000530404 TTLL1O95922 423 aa24.71■■□□□ 1.55
TSPAN4-219ENST00000530404 ITGB8P26012 769 aa24.71■■□□□ 1.55
TSPAN4-219ENST00000530404 MKL1Q969V6 931 aa24.71■■□□□ 1.55
TSPAN4-219ENST00000530404 GUCD1Q96NT3 240 aa24.71■■□□□ 1.55
TSPAN4-219ENST00000530404 SLC38A10Q9HBR0 1119 aa24.71■■□□□ 1.55
TSPAN4-219ENST00000530404 ISY1Q9ULR0 285 aaKnown RBP24.71■■□□□ 1.55
TSPAN4-219ENST00000530404 PLIN4Q96Q06 1357 aa24.7■■□□□ 1.55
TSPAN4-219ENST00000530404 SYNRGQ9UMZ2 1314 aa24.7■■□□□ 1.54
TSPAN4-219ENST00000530404 DNAJC25-GNG10A0A024R161 153 aa24.7■■□□□ 1.54
TSPAN4-219ENST00000530404 ERC2O15083 957 aa24.7■■□□□ 1.54
TSPAN4-219ENST00000530404 ADAMTS4O75173 837 aa24.7■■□□□ 1.54
TSPAN4-219ENST00000530404 TSPY3P0CV98 308 aa24.7■■□□□ 1.54
TSPAN4-219ENST00000530404 TSPY8P0CW00 308 aa24.7■■□□□ 1.54
TSPAN4-219ENST00000530404 IRX5P78411 483 aaPredicted RBP24.7■■□□□ 1.54
TSPAN4-219ENST00000530404 C1orf53Q5VUE5 145 aa24.7■■□□□ 1.54
TSPAN4-219ENST00000530404 SLFN13Q68D06 897 aa24.7■■□□□ 1.54
TSPAN4-219ENST00000530404 CCDC129Q6ZRS4 1044 aa24.7■■□□□ 1.54
TSPAN4-219ENST00000530404 NAPBQ9H115 298 aa24.7■■□□□ 1.54
TSPAN4-219ENST00000530404 ZNF287Q9HBT7 754 aa24.7■■□□□ 1.54
TSPAN4-219ENST00000530404 FEM1BQ9UK73 627 aa24.7■■□□□ 1.54
TSPAN4-219ENST00000530404 SYNGAP1Q96PV0 1343 aa24.69■■□□□ 1.54
TSPAN4-219ENST00000530404 PQBP1O60828 265 aaKnown RBP24.69■■□□□ 1.54
TSPAN4-219ENST00000530404 TFAP4Q01664 338 aa24.69■■□□□ 1.54
TSPAN4-219ENST00000530404 PPARAQ07869 468 aa24.69■■□□□ 1.54
TSPAN4-219ENST00000530404 LRRFIP1Q32MZ4 808 aaKnown RBP24.69■■□□□ 1.54
TSPAN4-219ENST00000530404 NEDD1Q8NHV4 660 aa24.69■■□□□ 1.54
TSPAN4-219ENST00000530404 FGD4Q96M96 766 aa24.69■■□□□ 1.54
TSPAN4-219ENST00000530404 NACAP1Q9BZK3 213 aa24.69■■□□□ 1.54
TSPAN4-219ENST00000530404 HOMER2Q9NSB8 354 aa24.69■■□□□ 1.54
TSPAN4-219ENST00000530404 MYADML2A6NDP7 307 aa24.68■■□□□ 1.54
TSPAN4-219ENST00000530404 ATP2A1O14983 1001 aa24.68■■□□□ 1.54
TSPAN4-219ENST00000530404 CLTBP09497 229 aa24.68■■□□□ 1.54
TSPAN4-219ENST00000530404 PDE4BQ07343 736 aa24.68■■□□□ 1.54
TSPAN4-219ENST00000530404 ZMYM1Q5SVZ6 1142 aa24.68■■□□□ 1.54
TSPAN4-219ENST00000530404 ANKRD35Q8N283 1001 aa24.68■■□□□ 1.54
TSPAN4-219ENST00000530404 GMCL1P1Q8NEA9 526 aa24.68■■□□□ 1.54
TSPAN4-219ENST00000530404 INCENPQ9NQS7 918 aa24.68■■□□□ 1.54
TSPAN4-219ENST00000530404 FAM184BQ9ULE4 1060 aa24.68■■□□□ 1.54
TSPAN4-219ENST00000530404 ADCY6O43306 1168 aa24.67■■□□□ 1.54
TSPAN4-219ENST00000530404 BMP3P12645 472 aa24.67■■□□□ 1.54
TSPAN4-219ENST00000530404 MX1P20591 662 aa24.67■■□□□ 1.54
TSPAN4-219ENST00000530404 CTDSPL2Q05D32 466 aa24.67■■□□□ 1.54
TSPAN4-219ENST00000530404 MAMDC4Q6UXC1 1216 aa24.67■■□□□ 1.54
TSPAN4-219ENST00000530404 MSL3Q8N5Y2 521 aaKnown RBP24.67■■□□□ 1.54
TSPAN4-219ENST00000530404 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.67■■□□□ 1.54
TSPAN4-219ENST00000530404 TMEM232C9JQI7 657 aa24.66■■□□□ 1.54
TSPAN4-219ENST00000530404 FOXP2O15409 715 aa24.66■■□□□ 1.54
TSPAN4-219ENST00000530404 ACLYP53396 1101 aa24.66■■□□□ 1.54
TSPAN4-219ENST00000530404 ZNF697Q5TEC3 545 aa24.66■■□□□ 1.54
TSPAN4-219ENST00000530404 FAM109BQ6ICB4 259 aaPredicted RBP24.66■■□□□ 1.54
TSPAN4-219ENST00000530404 RASGRP2Q7LDG7 609 aa24.66■■□□□ 1.54
TSPAN4-219ENST00000530404 TACC3Q9Y6A5 838 aa24.66■■□□□ 1.54
TSPAN4-219ENST00000530404 CUL9Q8IWT3 2517 aa24.65■■□□□ 1.54
TSPAN4-219ENST00000530404 EPHB4P54760 987 aa24.65■■□□□ 1.54
TSPAN4-219ENST00000530404 ACVR2BQ13705 512 aa24.65■■□□□ 1.54
TSPAN4-219ENST00000530404 KCNA10Q16322 511 aa24.65■■□□□ 1.54
TSPAN4-219ENST00000530404 KLHDC9Q8NEP7 349 aa24.65■■□□□ 1.54
TSPAN4-219ENST00000530404 GBF1Q92538 1859 aa24.65■■□□□ 1.54
TSPAN4-219ENST00000530404 STARD7Q9NQZ5 370 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms