RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 ORAI2Q96SN7 254 aa17.03■□□□□ 0.32
PCDHA4-203ENST00000530339 CYP21A2P08686 494 aa17.02■□□□□ 0.32
PCDHA4-203ENST00000530339 ZNF131P52739 623 aa17.02■□□□□ 0.32
PCDHA4-203ENST00000530339 HOMER3Q9NSC5 361 aa17.02■□□□□ 0.32
PCDHA4-203ENST00000530339 JAG2Q9Y219 1238 aa17.02■□□□□ 0.32
PCDHA4-203ENST00000530339 NOD1Q9Y239 953 aa17.02■□□□□ 0.32
PCDHA4-203ENST00000530339 CARMIL3Q8ND23 1372 aa17.02■□□□□ 0.32
PCDHA4-203ENST00000530339 COPB1P53618 953 aaKnown RBP17.02■□□□□ 0.32
PCDHA4-203ENST00000530339 FBXO38Q6PIJ6 1188 aa17.02■□□□□ 0.32
PCDHA4-203ENST00000530339 NELFCDQ8IXH7 590 aa17.02■□□□□ 0.32
PCDHA4-203ENST00000530339 CCDC62Q6P9F0 684 aa17.02■□□□□ 0.31
PCDHA4-203ENST00000530339 EFCAB13Q8IY85 973 aa17.02■□□□□ 0.31
PCDHA4-203ENST00000530339 BLIDQ8IZY5 108 aa17.02■□□□□ 0.31
PCDHA4-203ENST00000530339 PREX2Q70Z35 1606 aa17.02■□□□□ 0.31
PCDHA4-203ENST00000530339 KCNK3O14649 394 aa17.02■□□□□ 0.31
PCDHA4-203ENST00000530339 SLC8A1P32418 973 aa17.02■□□□□ 0.31
PCDHA4-203ENST00000530339 TFAP4Q01664 338 aa17.02■□□□□ 0.31
PCDHA4-203ENST00000530339 LINC00301Q8NCQ3 95 aa17.02■□□□□ 0.31
PCDHA4-203ENST00000530339 PLEKHA4Q9H4M7 779 aa17.02■□□□□ 0.31
PCDHA4-203ENST00000530339 CPSF1Q10570 1443 aaKnown RBP17.02■□□□□ 0.31
PCDHA4-203ENST00000530339 LONP1P36776 959 aaKnown RBP17.01■□□□□ 0.31
PCDHA4-203ENST00000530339 RASSF2P50749 326 aa17.01■□□□□ 0.31
PCDHA4-203ENST00000530339 N4BP1O75113 896 aaKnown RBP17.01■□□□□ 0.31
PCDHA4-203ENST00000530339 ZNF853P0CG23 659 aa17.01■□□□□ 0.31
PCDHA4-203ENST00000530339 NCAPH2Q6IBW4 605 aa17.01■□□□□ 0.31
PCDHA4-203ENST00000530339 FAN1Q9Y2M0 1017 aa17.01■□□□□ 0.31
PCDHA4-203ENST00000530339 ARHGAP31Q2M1Z3 1444 aa17.01■□□□□ 0.31
PCDHA4-203ENST00000530339 KRIT1O00522 736 aa17.01■□□□□ 0.31
PCDHA4-203ENST00000530339 PDE6AP16499 860 aa17.01■□□□□ 0.31
PCDHA4-203ENST00000530339 TERF2Q15554 542 aa17.01■□□□□ 0.31
PCDHA4-203ENST00000530339 SLFN12Q8IYM2 578 aa17.01■□□□□ 0.31
PCDHA4-203ENST00000530339 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.01■□□□□ 0.31
PCDHA4-203ENST00000530339 YWHAEP62258 255 aaKnown RBP17■□□□□ 0.31
PCDHA4-203ENST00000530339 CLEC17AQ6ZS10 378 aa17■□□□□ 0.31
PCDHA4-203ENST00000530339 RNF10Q8N5U6 811 aaKnown RBP17■□□□□ 0.31
PCDHA4-203ENST00000530339 LSM14BQ9BX40 385 aaKnown RBP17■□□□□ 0.31
PCDHA4-203ENST00000530339 PARD6BQ9BYG5 372 aa17■□□□□ 0.31
PCDHA4-203ENST00000530339 VCX3BQ9H321 246 aa17■□□□□ 0.31
PCDHA4-203ENST00000530339 TBC1D7Q9P0N9 293 aa17■□□□□ 0.31
PCDHA4-203ENST00000530339 GPHNQ9NQX3 736 aaPredicted RBP17■□□□□ 0.31
PCDHA4-203ENST00000530339 AGTPBP1Q9UPW5 1226 aa17■□□□□ 0.31
PCDHA4-203ENST00000530339 NOL3O60936 208 aaKnown RBP17■□□□□ 0.31
PCDHA4-203ENST00000530339 RPN1P04843 607 aaKnown RBP17■□□□□ 0.31
PCDHA4-203ENST00000530339 ALDH1B1P30837 517 aa17■□□□□ 0.31
PCDHA4-203ENST00000530339 RPS8P62241 208 aaKnown RBP17■□□□□ 0.31
PCDHA4-203ENST00000530339 RAB3IL1Q8TBN0 382 aa17■□□□□ 0.31
PCDHA4-203ENST00000530339 ZBTB21Q9ULJ3 1066 aa17■□□□□ 0.31
PCDHA4-203ENST00000530339 SARM1Q6SZW1 724 aa17■□□□□ 0.31
PCDHA4-203ENST00000530339 ZBED4O75132 1171 aa16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 STK10O94804 968 aaKnown RBP16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 KRT15P19012 456 aa16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 STX2P32856 288 aa16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 MYOCDQ8IZQ8 938 aa16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 MICAL1Q8TDZ2 1067 aa16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 PNMA6AP0CW24 399 aaPredicted RBP16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 TRPC3Q13507 836 aa16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 ZMYM1Q5SVZ6 1142 aa16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 DPP8Q6V1X1 898 aaPredicted RBP16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 VSTM4Q8IW00 320 aa16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 MRRFQ96E11 262 aaKnown RBP16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 CCDC169A6NNP5 214 aa16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 H0YCG3 227 aa16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 KCNQ3O43525 872 aa16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 STAT1P42224 750 aa16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 RESTQ13127 1097 aa16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 VPS52Q8N1B4 723 aa16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 SYMPKQ92797 1274 aaKnown RBP16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 FAM212AQ96EL1 285 aa16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 FOXP1Q9H334 677 aaPredicted RBP16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 LARGE1O95461 756 aa16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 PSMC4P43686 418 aa16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 LGSNQ5TDP6 509 aa16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 KLHL14Q9P2G3 628 aa16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 DBNLQ9UJU6 430 aaKnown RBP16.99■□□□□ 0.31
PCDHA4-203ENST00000530339 A0A087WUV0 522 aaPredicted RBP16.98■□□□□ 0.31
PCDHA4-203ENST00000530339 SMCO2A6NFE2 343 aa16.98■□□□□ 0.31
PCDHA4-203ENST00000530339 SF3A3Q12874 501 aaKnown RBP eCLIP16.98■□□□□ 0.31
PCDHA4-203ENST00000530339 CMTR1Q8N1G2 835 aaKnown RBP16.98■□□□□ 0.31
PCDHA4-203ENST00000530339 LARGE2Q8N3Y3 721 aa16.98■□□□□ 0.31
PCDHA4-203ENST00000530339 CHURC1Q8WUH1 139 aa16.98■□□□□ 0.31
PCDHA4-203ENST00000530339 METTL14Q9HCE5 456 aaKnown RBP16.98■□□□□ 0.31
PCDHA4-203ENST00000530339 KDM6BO15054 1643 aa16.98■□□□□ 0.31
PCDHA4-203ENST00000530339 BUB1O43683 1085 aa16.98■□□□□ 0.31
PCDHA4-203ENST00000530339 EXOC3O60645 756 aa16.98■□□□□ 0.31
PCDHA4-203ENST00000530339 MYL1P05976 194 aa16.98■□□□□ 0.31
PCDHA4-203ENST00000530339 SCG2P13521 617 aa16.98■□□□□ 0.31
PCDHA4-203ENST00000530339 GOLGA8FQ08AF8 430 aa16.98■□□□□ 0.31
PCDHA4-203ENST00000530339 GOLGA8DPQ0D2H9 430 aa16.98■□□□□ 0.31
PCDHA4-203ENST00000530339 PCDHB13Q9Y5F0 798 aa16.98■□□□□ 0.31
PCDHA4-203ENST00000530339 PTCH1Q13635 1447 aa16.98■□□□□ 0.31
PCDHA4-203ENST00000530339 ATP2B4P23634 1241 aa16.98■□□□□ 0.31
PCDHA4-203ENST00000530339 ZNF354CQ86Y25 554 aa16.98■□□□□ 0.31
PCDHA4-203ENST00000530339 FAM184BQ9ULE4 1060 aa16.98■□□□□ 0.31
PCDHA4-203ENST00000530339 RIPOR2Q9Y4F9 1068 aa16.98■□□□□ 0.31
PCDHA4-203ENST00000530339 NLRP1Q9C000 1473 aa16.98■□□□□ 0.31
PCDHA4-203ENST00000530339 HIP1RO75146 1068 aa16.98■□□□□ 0.31
PCDHA4-203ENST00000530339 EPHB4P54760 987 aa16.98■□□□□ 0.31
PCDHA4-203ENST00000530339 RBL2Q08999 1139 aa16.98■□□□□ 0.31
PCDHA4-203ENST00000530339 ZNF589Q86UQ0 364 aaPredicted RBP16.98■□□□□ 0.31
PCDHA4-203ENST00000530339 MYCT1Q8N699 235 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms