RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 C5P01031 1676 aa11.39□□□□□ -0.59
CCDC90B-217ENST00000530253 HEG1Q9ULI3 1381 aa11.39□□□□□ -0.59
CCDC90B-217ENST00000530253 NEFLP07196 543 aa11.38□□□□□ -0.59
CCDC90B-217ENST00000530253 JUNBP17275 347 aaPredicted RBP11.38□□□□□ -0.59
CCDC90B-217ENST00000530253 POU4F3Q15319 338 aa11.38□□□□□ -0.59
CCDC90B-217ENST00000530253 TXNRD1Q16881 649 aa11.38□□□□□ -0.59
CCDC90B-217ENST00000530253 ZNF790Q6PG37 636 aa11.38□□□□□ -0.59
CCDC90B-217ENST00000530253 CCNJLQ8IV13 435 aa11.38□□□□□ -0.59
CCDC90B-217ENST00000530253 BABAM1Q9NWV8 329 aa11.38□□□□□ -0.59
CCDC90B-217ENST00000530253 ACTL7BQ9Y614 415 aa11.38□□□□□ -0.59
CCDC90B-217ENST00000530253 LRP5O75197 1615 aa11.38□□□□□ -0.59
CCDC90B-217ENST00000530253 METTL12A8MUP2 240 aa11.37□□□□□ -0.59
CCDC90B-217ENST00000530253 CHL1O00533 1208 aa11.37□□□□□ -0.59
CCDC90B-217ENST00000530253 MAOBP27338 520 aa11.37□□□□□ -0.59
CCDC90B-217ENST00000530253 ADMP35318 185 aa11.37□□□□□ -0.59
CCDC90B-217ENST00000530253 ITPK1Q13572 414 aa11.37□□□□□ -0.59
CCDC90B-217ENST00000530253 FLCNQ8NFG4 579 aa11.37□□□□□ -0.59
CCDC90B-217ENST00000530253 ZNF496Q96IT1 587 aaPredicted RBP11.37□□□□□ -0.59
CCDC90B-217ENST00000530253 LIN7BQ9HAP6 207 aa11.37□□□□□ -0.59
CCDC90B-217ENST00000530253 RAD18Q9NS91 495 aa11.37□□□□□ -0.59
CCDC90B-217ENST00000530253 MIS18AQ9NYP9 233 aa11.37□□□□□ -0.59
CCDC90B-217ENST00000530253 TAF1LQ8IZX4 1826 aa11.37□□□□□ -0.59
CCDC90B-217ENST00000530253 IL16Q14005 1332 aa11.36□□□□□ -0.59
CCDC90B-217ENST00000530253 RAB6AP20340 208 aa11.36□□□□□ -0.59
CCDC90B-217ENST00000530253 FZD5Q13467 585 aa11.36□□□□□ -0.59
CCDC90B-217ENST00000530253 GALNT12Q8IXK2 581 aa11.36□□□□□ -0.59
CCDC90B-217ENST00000530253 CORO1BQ9BR76 489 aa11.36□□□□□ -0.59
CCDC90B-217ENST00000530253 IFT57Q9NWB7 429 aa11.36□□□□□ -0.59
CCDC90B-217ENST00000530253 C4BP0C0L5 1744 aa11.35□□□□□ -0.59
CCDC90B-217ENST00000530253 EIF4A1P60842 406 aaKnown RBP11.35□□□□□ -0.59
CCDC90B-217ENST00000530253 CALD1Q05682 793 aaKnown RBP11.35□□□□□ -0.59
CCDC90B-217ENST00000530253 WDR63Q8IWG1 891 aa11.35□□□□□ -0.59
CCDC90B-217ENST00000530253 TSPYL4Q9UJ04 414 aa11.35□□□□□ -0.59
CCDC90B-217ENST00000530253 CCNL1Q9UK58 526 aaPredicted RBP11.35□□□□□ -0.59
CCDC90B-217ENST00000530253 LAMB4A4D0S4 1761 aa11.35□□□□□ -0.59
CCDC90B-217ENST00000530253 FAM170BA6NMN3 283 aa11.34□□□□□ -0.59
CCDC90B-217ENST00000530253 ABL1P00519 1130 aa11.34□□□□□ -0.59
CCDC90B-217ENST00000530253 NFICP08651 508 aa11.34□□□□□ -0.59
CCDC90B-217ENST00000530253 GNAI1P63096 354 aa11.34□□□□□ -0.59
CCDC90B-217ENST00000530253 DYMQ7RTS9 669 aa11.34□□□□□ -0.59
CCDC90B-217ENST00000530253 TTC5Q8N0Z6 440 aa11.34□□□□□ -0.59
CCDC90B-217ENST00000530253 LINC00116Q8NCU8 138 aa11.34□□□□□ -0.59
CCDC90B-217ENST00000530253 GATA6Q92908 595 aa11.34□□□□□ -0.59
CCDC90B-217ENST00000530253 A0A1W2PP55 124 aa11.33□□□□□ -0.6
CCDC90B-217ENST00000530253 HNRNPUQ00839 825 aaKnown RBP eCLIP11.33□□□□□ -0.6
CCDC90B-217ENST00000530253 ZNF827Q17R98 1081 aa11.33□□□□□ -0.6
CCDC90B-217ENST00000530253 ZNF423Q2M1K9 1284 aa11.33□□□□□ -0.6
CCDC90B-217ENST00000530253 DNAJC10Q8IXB1 793 aa11.33□□□□□ -0.6
CCDC90B-217ENST00000530253 SHISA5Q8N114 240 aa11.33□□□□□ -0.6
CCDC90B-217ENST00000530253 SEMA6CQ9H3T2 930 aa11.33□□□□□ -0.6
CCDC90B-217ENST00000530253 ACSS3Q9H6R3 686 aa11.33□□□□□ -0.6
CCDC90B-217ENST00000530253 CCDC87Q9NVE4 849 aa11.33□□□□□ -0.6
CCDC90B-217ENST00000530253 AP4E1Q9UPM8 1137 aa11.33□□□□□ -0.6
CCDC90B-217ENST00000530253 CASZ1Q86V15 1759 aa11.33□□□□□ -0.6
CCDC90B-217ENST00000530253 FANCIQ9NVI1 1328 aa11.33□□□□□ -0.6
CCDC90B-217ENST00000530253 TUBGCP6Q96RT7 1819 aa11.32□□□□□ -0.6
CCDC90B-217ENST00000530253 PRAMEF22A3QJZ6 481 aa11.32□□□□□ -0.6
CCDC90B-217ENST00000530253 POLR3DP05423 398 aaPredicted RBP11.32□□□□□ -0.6
CCDC90B-217ENST00000530253 ITGB5P18084 799 aa11.32□□□□□ -0.6
CCDC90B-217ENST00000530253 KRT24Q2M2I5 525 aa11.32□□□□□ -0.6
CCDC90B-217ENST00000530253 TSR2Q969E8 191 aaKnown RBP11.32□□□□□ -0.6
CCDC90B-217ENST00000530253 TCF12Q99081 682 aa11.32□□□□□ -0.6
CCDC90B-217ENST00000530253 LRRC4CQ9HCJ2 640 aa11.32□□□□□ -0.6
CCDC90B-217ENST00000530253 ZBED9Q6R2W3 1325 aa11.32□□□□□ -0.6
CCDC90B-217ENST00000530253 CNTNAP4Q9C0A0 1308 aa11.32□□□□□ -0.6
CCDC90B-217ENST00000530253 QSER1Q2KHR3 1735 aa11.32□□□□□ -0.6
CCDC90B-217ENST00000530253 ZBTB7AO95365 584 aa11.31□□□□□ -0.6
CCDC90B-217ENST00000530253 B3GALT4O96024 378 aa11.31□□□□□ -0.6
CCDC90B-217ENST00000530253 CYP19A1P11511 503 aaPredicted RBP11.31□□□□□ -0.6
CCDC90B-217ENST00000530253 GRIA4P48058 902 aa11.31□□□□□ -0.6
CCDC90B-217ENST00000530253 SLC15A2Q16348 729 aa11.31□□□□□ -0.6
CCDC90B-217ENST00000530253 OGFOD2Q6N063 350 aa11.31□□□□□ -0.6
CCDC90B-217ENST00000530253 NFXL1Q6ZNB6 911 aa11.31□□□□□ -0.6
CCDC90B-217ENST00000530253 AMIGO3Q86WK7 504 aa11.31□□□□□ -0.6
CCDC90B-217ENST00000530253 STK11IPQ8N1F8 1099 aa11.31□□□□□ -0.6
CCDC90B-217ENST00000530253 FAM105AQ9NUU6 356 aa11.31□□□□□ -0.6
CCDC90B-217ENST00000530253 STK32BQ9NY57 414 aa11.31□□□□□ -0.6
CCDC90B-217ENST00000530253 LAS1LQ9Y4W2 734 aaKnown RBP11.31□□□□□ -0.6
CCDC90B-217ENST00000530253 SYNGAP1Q96PV0 1343 aa11.31□□□□□ -0.6
CCDC90B-217ENST00000530253 MYH14Q7Z406 1995 aaKnown RBP11.3□□□□□ -0.6
CCDC90B-217ENST00000530253 UBR3Q6ZT12 1888 aa11.3□□□□□ -0.6
CCDC90B-217ENST00000530253 ASPAP45381 313 aa11.3□□□□□ -0.6
CCDC90B-217ENST00000530253 SLFN5Q08AF3 891 aa11.3□□□□□ -0.6
CCDC90B-217ENST00000530253 B4GALNT3Q6L9W6 998 aa11.3□□□□□ -0.6
CCDC90B-217ENST00000530253 ZNF765Q7L2R6 523 aa11.3□□□□□ -0.6
CCDC90B-217ENST00000530253 TRMT2AQ8IZ69 625 aaKnown RBP11.3□□□□□ -0.6
CCDC90B-217ENST00000530253 GSX1Q9H4S2 264 aaPredicted RBP11.3□□□□□ -0.6
CCDC90B-217ENST00000530253 PAK6Q9NQU5 681 aaPredicted RBP11.3□□□□□ -0.6
CCDC90B-217ENST00000530253 ZC3H7BQ9UGR2 993 aaKnown RBP11.3□□□□□ -0.6
CCDC90B-217ENST00000530253 EGFL7Q9UHF1 273 aa11.3□□□□□ -0.6
CCDC90B-217ENST00000530253 E9PSI1 815 aa11.29□□□□□ -0.6
CCDC90B-217ENST00000530253 SNRPA1P09661 255 aaKnown RBP11.29□□□□□ -0.6
CCDC90B-217ENST00000530253 AP3B2Q13367 1082 aa11.29□□□□□ -0.6
CCDC90B-217ENST00000530253 SPRED3Q2MJR0 410 aa11.29□□□□□ -0.6
CCDC90B-217ENST00000530253 KIAA0319Q5VV43 1072 aa11.29□□□□□ -0.6
CCDC90B-217ENST00000530253 POU5F2Q8N7G0 328 aa11.29□□□□□ -0.6
CCDC90B-217ENST00000530253 C8orf58Q8NAV2 365 aa11.29□□□□□ -0.6
CCDC90B-217ENST00000530253 BRPF3Q9ULD4 1205 aa11.29□□□□□ -0.6
CCDC90B-217ENST00000530253 USP16Q9Y5T5 823 aa11.29□□□□□ -0.6
CCDC90B-217ENST00000530253 HOXB7P09629 217 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms