RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 FEM1BQ9UK73 627 aa18.28■□□□□ 0.52
CCDC90B-215ENST00000529745 RANBP6O60518 1105 aaKnown RBP18.27■□□□□ 0.52
CCDC90B-215ENST00000529745 MYCP01106 439 aaPredicted RBP18.27■□□□□ 0.52
CCDC90B-215ENST00000529745 BMP3P12645 472 aa18.27■□□□□ 0.52
CCDC90B-215ENST00000529745 ZKSCAN1P17029 563 aaPredicted RBP18.27■□□□□ 0.52
CCDC90B-215ENST00000529745 SLFN13Q68D06 897 aa18.27■□□□□ 0.52
CCDC90B-215ENST00000529745 MFSD6Q6ZSS7 791 aa18.27■□□□□ 0.52
CCDC90B-215ENST00000529745 CENPQQ7L2Z9 268 aaPredicted RBP18.27■□□□□ 0.52
CCDC90B-215ENST00000529745 TBC1D10CQ8IV04 446 aa18.27■□□□□ 0.52
CCDC90B-215ENST00000529745 NUP88Q99567 741 aaPredicted RBP18.27■□□□□ 0.52
CCDC90B-215ENST00000529745 IL25Q9H293 177 aa18.27■□□□□ 0.52
CCDC90B-215ENST00000529745 PRO3102Q9H379 93 aa18.27■□□□□ 0.52
CCDC90B-215ENST00000529745 HMX1Q9NP08 348 aaPredicted RBP18.27■□□□□ 0.52
CCDC90B-215ENST00000529745 ZNF213O14771 459 aa18.26■□□□□ 0.51
CCDC90B-215ENST00000529745 CHMLP26374 656 aa18.26■□□□□ 0.51
CCDC90B-215ENST00000529745 STAT3P40763 770 aa18.26■□□□□ 0.51
CCDC90B-215ENST00000529745 TRIM32Q13049 653 aa18.26■□□□□ 0.51
CCDC90B-215ENST00000529745 RUFY2Q8WXA3 655 aa18.26■□□□□ 0.51
CCDC90B-215ENST00000529745 TTC14Q96N46 770 aa18.26■□□□□ 0.51
CCDC90B-215ENST00000529745 CTNNA3Q9UI47 895 aa18.26■□□□□ 0.51
CCDC90B-215ENST00000529745 STX8Q9UNK0 236 aa18.26■□□□□ 0.51
CCDC90B-215ENST00000529745 RAD21O60216 631 aa18.25■□□□□ 0.51
CCDC90B-215ENST00000529745 NMT2O60551 498 aa18.25■□□□□ 0.51
CCDC90B-215ENST00000529745 ADORA2AP29274 412 aa18.25■□□□□ 0.51
CCDC90B-215ENST00000529745 OAZ1P54368 228 aa18.25■□□□□ 0.51
CCDC90B-215ENST00000529745 HAND2P61296 217 aa18.25■□□□□ 0.51
CCDC90B-215ENST00000529745 CCL14Q16627 93 aa18.25■□□□□ 0.51
CCDC90B-215ENST00000529745 WDR78Q5VTH9 848 aa18.25■□□□□ 0.51
CCDC90B-215ENST00000529745 OLFML2BQ68BL8 750 aa18.25■□□□□ 0.51
CCDC90B-215ENST00000529745 FAM160B2Q86V87 743 aa18.25■□□□□ 0.51
CCDC90B-215ENST00000529745 NPLOC4Q8TAT6 608 aa18.25■□□□□ 0.51
CCDC90B-215ENST00000529745 TEX13BQ9BXU2 312 aa18.25■□□□□ 0.51
CCDC90B-215ENST00000529745 SLC38A10Q9HBR0 1119 aa18.25■□□□□ 0.51
CCDC90B-215ENST00000529745 TOP1P11387 765 aaKnown RBP18.24■□□□□ 0.51
CCDC90B-215ENST00000529745 PRKAR2AP13861 404 aaKnown RBP18.24■□□□□ 0.51
CCDC90B-215ENST00000529745 STAT2P52630 851 aa18.24■□□□□ 0.51
CCDC90B-215ENST00000529745 CACNB2Q08289 660 aaPredicted RBP18.24■□□□□ 0.51
CCDC90B-215ENST00000529745 PLS1Q14651 629 aa18.24■□□□□ 0.51
CCDC90B-215ENST00000529745 RCSD1Q6JBY9 416 aa18.24■□□□□ 0.51
CCDC90B-215ENST00000529745 NCAPG2Q86XI2 1143 aa18.24■□□□□ 0.51
CCDC90B-215ENST00000529745 ANKLE1Q8NAG6 615 aa18.24■□□□□ 0.51
CCDC90B-215ENST00000529745 CHURC1Q8WUH1 139 aa18.24■□□□□ 0.51
CCDC90B-215ENST00000529745 ESR2Q92731 530 aa18.24■□□□□ 0.51
CCDC90B-215ENST00000529745 DEFB118Q96PH6 123 aa18.24■□□□□ 0.51
CCDC90B-215ENST00000529745 FLRT1Q9NZU1 646 aa18.24■□□□□ 0.51
CCDC90B-215ENST00000529745 NEDD4P46934 1319 aa18.23■□□□□ 0.51
CCDC90B-215ENST00000529745 ZBED4O75132 1171 aa18.23■□□□□ 0.51
CCDC90B-215ENST00000529745 FCER1AP12319 257 aa18.23■□□□□ 0.51
CCDC90B-215ENST00000529745 SLC1A4P43007 532 aa18.23■□□□□ 0.51
CCDC90B-215ENST00000529745 IMMTQ16891 758 aaKnown RBP18.23■□□□□ 0.51
CCDC90B-215ENST00000529745 RRP12Q5JTH9 1297 aaKnown RBP18.23■□□□□ 0.51
CCDC90B-215ENST00000529745 DCAF4Q8WV16 495 aa18.23■□□□□ 0.51
CCDC90B-215ENST00000529745 TOMM22Q9NS69 142 aa18.23■□□□□ 0.51
CCDC90B-215ENST00000529745 SLC5A4Q9NY91 659 aa18.23■□□□□ 0.51
CCDC90B-215ENST00000529745 DIS3Q9Y2L1 958 aaKnown RBP18.23■□□□□ 0.51
CCDC90B-215ENST00000529745 ALPK3Q96L96 1907 aa18.23■□□□□ 0.51
CCDC90B-215ENST00000529745 TMEM232C9JQI7 657 aa18.22■□□□□ 0.51
CCDC90B-215ENST00000529745 SGSM2O43147 1006 aa18.22■□□□□ 0.51
CCDC90B-215ENST00000529745 COBLO75128 1261 aa18.22■□□□□ 0.51
CCDC90B-215ENST00000529745 C1QBPQ07021 282 aaKnown RBP18.22■□□□□ 0.51
CCDC90B-215ENST00000529745 CCDC178Q5BJE1 867 aa18.22■□□□□ 0.51
CCDC90B-215ENST00000529745 MFSD14CQ5VZR4 134 aa18.22■□□□□ 0.51
CCDC90B-215ENST00000529745 BTNL9Q6UXG8 535 aa18.22■□□□□ 0.51
CCDC90B-215ENST00000529745 DPP9Q86TI2 863 aa18.22■□□□□ 0.51
CCDC90B-215ENST00000529745 DPF3Q92784 378 aa18.22■□□□□ 0.51
CCDC90B-215ENST00000529745 TMEM47Q9BQJ4 181 aa18.22■□□□□ 0.51
CCDC90B-215ENST00000529745 OGDHLQ9ULD0 1010 aa18.22■□□□□ 0.51
CCDC90B-215ENST00000529745 SNHG28P0DPA3 235 aa18.21■□□□□ 0.51
CCDC90B-215ENST00000529745 MCCP23508 829 aa18.21■□□□□ 0.51
CCDC90B-215ENST00000529745 SNRNP48Q6IEG0 339 aaKnown RBP18.21■□□□□ 0.51
CCDC90B-215ENST00000529745 SAMD1Q6SPF0 538 aaPredicted RBP18.21■□□□□ 0.51
CCDC90B-215ENST00000529745 DGKHQ86XP1 1220 aa18.21■□□□□ 0.51
CCDC90B-215ENST00000529745 ANKS1AQ92625 1134 aa18.21■□□□□ 0.51
CCDC90B-215ENST00000529745 KIFC2Q96AC6 838 aa18.21■□□□□ 0.51
CCDC90B-215ENST00000529745 CNNM2Q9H8M5 875 aa18.21■□□□□ 0.51
CCDC90B-215ENST00000529745 SOX1O00570 391 aaPredicted RBP18.2■□□□□ 0.5
CCDC90B-215ENST00000529745 FARP2O94887 1054 aaPredicted RBP18.2■□□□□ 0.5
CCDC90B-215ENST00000529745 ZNF792Q3KQV3 632 aa18.2■□□□□ 0.5
CCDC90B-215ENST00000529745 MAML3Q96JK9 1138 aa18.2■□□□□ 0.5
CCDC90B-215ENST00000529745 MMP19Q99542 508 aa18.2■□□□□ 0.5
CCDC90B-215ENST00000529745 FBXO40Q9UH90 709 aa18.2■□□□□ 0.5
CCDC90B-215ENST00000529745 RIPK3Q9Y572 518 aa18.2■□□□□ 0.5
CCDC90B-215ENST00000529745 DNAJC25-GNG10A0A024R161 153 aa18.19■□□□□ 0.5
CCDC90B-215ENST00000529745 SMCHD1A6NHR9 2005 aa18.19■□□□□ 0.5
CCDC90B-215ENST00000529745 TFRCP02786 760 aaKnown RBP18.19■□□□□ 0.5
CCDC90B-215ENST00000529745 CYBAP13498 195 aa18.19■□□□□ 0.5
CCDC90B-215ENST00000529745 CCND3P30281 292 aaPredicted RBP18.19■□□□□ 0.5
CCDC90B-215ENST00000529745 KCTD2Q14681 263 aa18.19■□□□□ 0.5
CCDC90B-215ENST00000529745 BMP2KLQ5H9B9 411 aa18.19■□□□□ 0.5
CCDC90B-215ENST00000529745 LHX8Q68G74 356 aa18.19■□□□□ 0.5
CCDC90B-215ENST00000529745 IQCA1Q86XH1 822 aa18.19■□□□□ 0.5
CCDC90B-215ENST00000529745 CHST13Q8NET6 341 aa18.19■□□□□ 0.5
CCDC90B-215ENST00000529745 KRT23Q9C075 422 aa18.19■□□□□ 0.5
CCDC90B-215ENST00000529745 NRBP1Q9UHY1 535 aa18.19■□□□□ 0.5
CCDC90B-215ENST00000529745 ZNF536O15090 1300 aa18.19■□□□□ 0.5
CCDC90B-215ENST00000529745 LCTP09848 1927 aa18.18■□□□□ 0.5
CCDC90B-215ENST00000529745 MSCO60682 206 aa18.18■□□□□ 0.5
CCDC90B-215ENST00000529745 KDM4AO75164 1064 aa18.18■□□□□ 0.5
CCDC90B-215ENST00000529745 PDHBP11177 359 aa18.18■□□□□ 0.5
CCDC90B-215ENST00000529745 TKFCQ3LXA3 575 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms