RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 LINC00116Q8NCU8 138 aa7.16□□□□□ -1.26
C11orf88-204ENST00000529661 PDZD8Q8NEN9 1154 aa7.16□□□□□ -1.26
C11orf88-204ENST00000529661 A0A1W2PQH9 124 aa7.15□□□□□ -1.26
C11orf88-204ENST00000529661 LRRC10BA6NIK2 292 aa7.15□□□□□ -1.26
C11orf88-204ENST00000529661 CTSKP43235 329 aa7.15□□□□□ -1.26
C11orf88-204ENST00000529661 GNL2Q13823 731 aaKnown RBP7.15□□□□□ -1.26
C11orf88-204ENST00000529661 SF3A1Q15459 793 aaKnown RBP7.15□□□□□ -1.26
C11orf88-204ENST00000529661 ZPBP2Q6X784 338 aa7.15□□□□□ -1.26
C11orf88-204ENST00000529661 VPS37DQ86XT2 251 aa7.15□□□□□ -1.26
C11orf88-204ENST00000529661 FAM169BQ8N8A8 192 aa7.15□□□□□ -1.26
C11orf88-204ENST00000529661 C19orf47Q8N9M1 422 aaKnown RBP7.15□□□□□ -1.26
C11orf88-204ENST00000529661 BRF1Q92994 677 aa7.15□□□□□ -1.26
C11orf88-204ENST00000529661 GMLQ99445 158 aa7.15□□□□□ -1.26
C11orf88-204ENST00000529661 PHAXQ9H814 394 aaKnown RBP7.15□□□□□ -1.26
C11orf88-204ENST00000529661 GP6Q9HCN6 339 aa7.15□□□□□ -1.26
C11orf88-204ENST00000529661 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.15□□□□□ -1.26
C11orf88-204ENST00000529661 STRIP2Q9ULQ0 834 aa7.15□□□□□ -1.26
C11orf88-204ENST00000529661 SHROOM4Q9ULL8 1493 aa7.15□□□□□ -1.27
C11orf88-204ENST00000529661 FITM1A5D6W6 292 aa7.14□□□□□ -1.27
C11orf88-204ENST00000529661 SSBP05455 408 aaKnown RBP eCLIP7.14□□□□□ -1.27
C11orf88-204ENST00000529661 MLANAQ16655 118 aa7.14□□□□□ -1.27
C11orf88-204ENST00000529661 POU5F2Q8N7G0 328 aa7.14□□□□□ -1.27
C11orf88-204ENST00000529661 EBF1Q9UH73 591 aa7.14□□□□□ -1.27
C11orf88-204ENST00000529661 ZNF451Q9Y4E5 1061 aa7.14□□□□□ -1.27
C11orf88-204ENST00000529661 MRVI1Q9Y6F6 885 aa7.14□□□□□ -1.27
C11orf88-204ENST00000529661 TMEM82A0PJX8 343 aa7.13□□□□□ -1.27
C11orf88-204ENST00000529661 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.13□□□□□ -1.27
C11orf88-204ENST00000529661 USP2O75604 605 aaPredicted RBP7.13□□□□□ -1.27
C11orf88-204ENST00000529661 ITGA4P13612 1032 aa7.13□□□□□ -1.27
C11orf88-204ENST00000529661 BMP8BP34820 402 aa7.13□□□□□ -1.27
C11orf88-204ENST00000529661 ZNF445P59923 1031 aa7.13□□□□□ -1.27
C11orf88-204ENST00000529661 SLC7A5Q01650 507 aa7.13□□□□□ -1.27
C11orf88-204ENST00000529661 CHRNEQ04844 493 aa7.13□□□□□ -1.27
C11orf88-204ENST00000529661 TCEAL1Q15170 157 aa7.13□□□□□ -1.27
C11orf88-204ENST00000529661 TIGD5Q53EQ6 642 aa7.13□□□□□ -1.27
C11orf88-204ENST00000529661 ANKRD39Q53RE8 183 aa7.13□□□□□ -1.27
C11orf88-204ENST00000529661 CWF19L1Q69YN2 538 aaKnown RBP7.13□□□□□ -1.27
C11orf88-204ENST00000529661 SPPL2CQ8IUH8 684 aa7.13□□□□□ -1.27
C11orf88-204ENST00000529661 ANKS4BQ8N8V4 417 aa7.13□□□□□ -1.27
C11orf88-204ENST00000529661 MAP6Q96JE9 813 aa7.13□□□□□ -1.27
C11orf88-204ENST00000529661 HAUS7Q99871 368 aa7.13□□□□□ -1.27
C11orf88-204ENST00000529661 G6PC3Q9BUM1 346 aa7.13□□□□□ -1.27
C11orf88-204ENST00000529661 CDADC1Q9BWV3 514 aa7.13□□□□□ -1.27
C11orf88-204ENST00000529661 RNF32Q9H0A6 362 aa7.13□□□□□ -1.27
C11orf88-204ENST00000529661 FAM53CQ9NYF3 392 aa7.13□□□□□ -1.27
C11orf88-204ENST00000529661 PRR13Q9NZ81 148 aa7.13□□□□□ -1.27
C11orf88-204ENST00000529661 GPR160Q9UJ42 338 aa7.13□□□□□ -1.27
C11orf88-204ENST00000529661 H0Y8X5 98 aa7.12□□□□□ -1.27
C11orf88-204ENST00000529661 GSNP06396 782 aa7.12□□□□□ -1.27
C11orf88-204ENST00000529661 CD247P20963 164 aa7.12□□□□□ -1.27
C11orf88-204ENST00000529661 SLC14A2Q15849 920 aa7.12□□□□□ -1.27
C11orf88-204ENST00000529661 ZNF648Q5T619 568 aaPredicted RBP7.12□□□□□ -1.27
C11orf88-204ENST00000529661 FIBCD1Q8N539 461 aa7.12□□□□□ -1.27
C11orf88-204ENST00000529661 ADCY4Q8NFM4 1077 aa7.12□□□□□ -1.27
C11orf88-204ENST00000529661 LINC01599Q8WXQ3 324 aa7.12□□□□□ -1.27
C11orf88-204ENST00000529661 DIRC2Q96SL1 478 aa7.12□□□□□ -1.27
C11orf88-204ENST00000529661 NOL6Q9H6R4 1146 aaKnown RBP7.12□□□□□ -1.27
C11orf88-204ENST00000529661 SP110Q9HB58 689 aa7.12□□□□□ -1.27
C11orf88-204ENST00000529661 ZNF281Q9Y2X9 895 aa7.12□□□□□ -1.27
C11orf88-204ENST00000529661 CBFA2T2O43439 604 aa7.11□□□□□ -1.27
C11orf88-204ENST00000529661 ZNF205O95201 554 aa7.11□□□□□ -1.27
C11orf88-204ENST00000529661 VAV1P15498 845 aa7.11□□□□□ -1.27
C11orf88-204ENST00000529661 YBX3P16989 372 aaKnown RBP eCLIP7.11□□□□□ -1.27
C11orf88-204ENST00000529661 GALK1P51570 392 aa7.11□□□□□ -1.27
C11orf88-204ENST00000529661 CASP7P55210 303 aa7.11□□□□□ -1.27
C11orf88-204ENST00000529661 HEATR6Q6AI08 1181 aaKnown RBP7.11□□□□□ -1.27
C11orf88-204ENST00000529661 PRR23BQ6ZRT6 265 aa7.11□□□□□ -1.27
C11orf88-204ENST00000529661 CEP128Q6ZU80 1094 aa7.11□□□□□ -1.27
C11orf88-204ENST00000529661 LILRA2Q8N149 483 aa7.11□□□□□ -1.27
C11orf88-204ENST00000529661 UBXN4Q92575 508 aa7.11□□□□□ -1.27
C11orf88-204ENST00000529661 HHIPL1Q96JK4 782 aa7.11□□□□□ -1.27
C11orf88-204ENST00000529661 ZDHHC15Q96MV8 337 aa7.11□□□□□ -1.27
C11orf88-204ENST00000529661 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.11□□□□□ -1.27
C11orf88-204ENST00000529661 AP5S1Q9NUS5 200 aa7.11□□□□□ -1.27
C11orf88-204ENST00000529661 FHOD1Q9Y613 1164 aa7.11□□□□□ -1.27
C11orf88-204ENST00000529661 FARP2O94887 1054 aaPredicted RBP7.1□□□□□ -1.27
C11orf88-204ENST00000529661 EPHX1P07099 455 aa7.1□□□□□ -1.27
C11orf88-204ENST00000529661 DNAJA1P31689 397 aaKnown RBP7.1□□□□□ -1.27
C11orf88-204ENST00000529661 PPP2R5DQ14738 602 aa7.1□□□□□ -1.27
C11orf88-204ENST00000529661 NR0B2Q15466 257 aa7.1□□□□□ -1.27
C11orf88-204ENST00000529661 KIAA1211LQ6NV74 962 aa7.1□□□□□ -1.27
C11orf88-204ENST00000529661 VHLLQ6RSH7 139 aa7.1□□□□□ -1.27
C11orf88-204ENST00000529661 ADAT2Q7Z6V5 191 aaKnown RBP7.1□□□□□ -1.27
C11orf88-204ENST00000529661 FCRL2Q96LA5 508 aaPredicted RBP7.1□□□□□ -1.27
C11orf88-204ENST00000529661 FGD4Q96M96 766 aa7.1□□□□□ -1.27
C11orf88-204ENST00000529661 TANGO6Q9C0B7 1094 aa7.1□□□□□ -1.27
C11orf88-204ENST00000529661 GBP3Q9H0R5 595 aa7.1□□□□□ -1.27
C11orf88-204ENST00000529661 NSUN3Q9H649 340 aaKnown RBP7.1□□□□□ -1.27
C11orf88-204ENST00000529661 SMAD7O15105 426 aaKnown RBP7.09□□□□□ -1.27
C11orf88-204ENST00000529661 PSPNO60542 156 aa7.09□□□□□ -1.27
C11orf88-204ENST00000529661 GSTM1P09488 218 aa7.09□□□□□ -1.27
C11orf88-204ENST00000529661 ENDOUP21128 410 aaKnown RBP7.09□□□□□ -1.27
C11orf88-204ENST00000529661 ARID5AQ03989 594 aa7.09□□□□□ -1.27
C11orf88-204ENST00000529661 SIRT2Q8IXJ6 389 aa7.09□□□□□ -1.27
C11orf88-204ENST00000529661 NAT16Q8N8M0 369 aa7.09□□□□□ -1.27
C11orf88-204ENST00000529661 KLHL6Q8WZ60 621 aa7.09□□□□□ -1.27
C11orf88-204ENST00000529661 KRTAP9-9Q9BYP9 154 aa7.09□□□□□ -1.27
C11orf88-204ENST00000529661 KRTAP9-4Q9BYQ2 154 aa7.09□□□□□ -1.27
C11orf88-204ENST00000529661 KLHL25Q9H0H3 589 aa7.09□□□□□ -1.27
C11orf88-204ENST00000529661 ERVK13-1Q9NX77 482 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms