RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 NOP58Q9Y2X3 529 aaKnown RBP10.87□□□□□ -0.67
VPS11-203ENST00000529545 TMX2Q9Y320 296 aa10.87□□□□□ -0.67
VPS11-203ENST00000529545 MYH8P13535 1937 aa10.87□□□□□ -0.67
VPS11-203ENST00000529545 PPIGQ13427 754 aaKnown RBP eCLIP10.86□□□□□ -0.67
VPS11-203ENST00000529545 TMEM132BQ14DG7 1078 aa10.86□□□□□ -0.67
VPS11-203ENST00000529545 ZKSCAN2Q63HK3 967 aa10.86□□□□□ -0.67
VPS11-203ENST00000529545 TMEM92Q6UXU6 159 aa10.86□□□□□ -0.67
VPS11-203ENST00000529545 CCDC129Q6ZRS4 1044 aa10.86□□□□□ -0.67
VPS11-203ENST00000529545 ANKRD33Q7Z3H0 272 aa10.86□□□□□ -0.67
VPS11-203ENST00000529545 AACSQ86V21 672 aa10.86□□□□□ -0.67
VPS11-203ENST00000529545 ERC1Q8IUD2 1116 aa10.86□□□□□ -0.67
VPS11-203ENST00000529545 RIOX2Q8IUF8 465 aa10.86□□□□□ -0.67
VPS11-203ENST00000529545 AMOTL1Q8IY63 956 aa10.86□□□□□ -0.67
VPS11-203ENST00000529545 ZNF710Q8N1W2 664 aa10.86□□□□□ -0.67
VPS11-203ENST00000529545 IL27Q8NEV9 243 aa10.86□□□□□ -0.67
VPS11-203ENST00000529545 PPM1EQ8WY54 764 aa10.86□□□□□ -0.67
VPS11-203ENST00000529545 CCDC17Q96LX7 622 aa10.86□□□□□ -0.67
VPS11-203ENST00000529545 TNNQ9UQP3 1299 aa10.86□□□□□ -0.67
VPS11-203ENST00000529545 MROH7Q68CQ1 1323 aa10.85□□□□□ -0.67
VPS11-203ENST00000529545 PLXNA1Q9UIW2 1896 aa10.85□□□□□ -0.67
VPS11-203ENST00000529545 MOXD2PA6NHM9 499 aa10.85□□□□□ -0.67
VPS11-203ENST00000529545 TIMP1P01033 207 aa10.85□□□□□ -0.67
VPS11-203ENST00000529545 PGK2P07205 417 aa10.85□□□□□ -0.67
VPS11-203ENST00000529545 PDE6AP16499 860 aa10.85□□□□□ -0.67
VPS11-203ENST00000529545 STAT3P40763 770 aa10.85□□□□□ -0.67
VPS11-203ENST00000529545 ACLYP53396 1101 aa10.85□□□□□ -0.67
VPS11-203ENST00000529545 FAAP100Q0VG06 881 aa10.85□□□□□ -0.67
VPS11-203ENST00000529545 KIAA1755Q5JYT7 1200 aa10.85□□□□□ -0.67
VPS11-203ENST00000529545 FTSJ3Q8IY81 847 aaKnown RBP10.85□□□□□ -0.67
VPS11-203ENST00000529545 USP38Q8NB14 1042 aa10.85□□□□□ -0.67
VPS11-203ENST00000529545 ATXN2LQ8WWM7 1075 aaKnown RBP10.85□□□□□ -0.67
VPS11-203ENST00000529545 VTI1AQ96AJ9 217 aa10.85□□□□□ -0.67
VPS11-203ENST00000529545 DDRGK1Q96HY6 314 aa10.85□□□□□ -0.67
VPS11-203ENST00000529545 GLT1D1Q96MS3 346 aa10.85□□□□□ -0.67
VPS11-203ENST00000529545 C1orf115Q9H7X2 142 aa10.85□□□□□ -0.67
VPS11-203ENST00000529545 SPC25Q9HBM1 224 aa10.85□□□□□ -0.67
VPS11-203ENST00000529545 GOPCQ9HD26 462 aa10.85□□□□□ -0.67
VPS11-203ENST00000529545 DCP1AQ9NPI6 582 aaPredicted RBP10.85□□□□□ -0.67
VPS11-203ENST00000529545 FAM184BQ9ULE4 1060 aa10.85□□□□□ -0.67
VPS11-203ENST00000529545 ROBO3Q96MS0 1386 aa10.85□□□□□ -0.67
VPS11-203ENST00000529545 COL11A1P12107 1806 aaPredicted RBP10.84□□□□□ -0.67
VPS11-203ENST00000529545 RAD21O60216 631 aa10.84□□□□□ -0.67
VPS11-203ENST00000529545 ZNF865P0CJ78 1059 aaPredicted RBP10.84□□□□□ -0.67
VPS11-203ENST00000529545 HOXB3P14651 431 aaPredicted RBP10.84□□□□□ -0.67
VPS11-203ENST00000529545 TAL1P17542 331 aaPredicted RBP10.84□□□□□ -0.67
VPS11-203ENST00000529545 ZNF792Q3KQV3 632 aa10.84□□□□□ -0.67
VPS11-203ENST00000529545 HSP90AB4PQ58FF6 505 aa10.84□□□□□ -0.67
VPS11-203ENST00000529545 AKNAD1Q5T1N1 836 aa10.84□□□□□ -0.67
VPS11-203ENST00000529545 MFSD5Q6N075 450 aa10.84□□□□□ -0.67
VPS11-203ENST00000529545 TMEM199Q8N511 208 aa10.84□□□□□ -0.67
VPS11-203ENST00000529545 MSL3Q8N5Y2 521 aaKnown RBP10.84□□□□□ -0.67
VPS11-203ENST00000529545 PCSK9Q8NBP7 692 aaKnown RBP10.84□□□□□ -0.67
VPS11-203ENST00000529545 SDR42E1Q8WUS8 393 aa10.84□□□□□ -0.67
VPS11-203ENST00000529545 DDX11Q96FC9 970 aa10.84□□□□□ -0.67
VPS11-203ENST00000529545 DYNLL2Q96FJ2 89 aa10.84□□□□□ -0.67
VPS11-203ENST00000529545 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.84□□□□□ -0.67
VPS11-203ENST00000529545 THEGQ9P2T0 379 aa10.84□□□□□ -0.67
VPS11-203ENST00000529545 ADAMTS5Q9UNA0 930 aa10.84□□□□□ -0.67
VPS11-203ENST00000529545 TTC28Q96AY4 2481 aa10.84□□□□□ -0.67
VPS11-203ENST00000529545 ELP1O95163 1332 aa10.84□□□□□ -0.67
VPS11-203ENST00000529545 ZNF532Q9HCE3 1301 aa10.84□□□□□ -0.67
VPS11-203ENST00000529545 APBB1O00213 710 aa10.83□□□□□ -0.68
VPS11-203ENST00000529545 VWA5AO00534 786 aa10.83□□□□□ -0.68
VPS11-203ENST00000529545 TLR3O15455 904 aaKnown RBP10.83□□□□□ -0.68
VPS11-203ENST00000529545 ADAMTS4O75173 837 aa10.83□□□□□ -0.68
VPS11-203ENST00000529545 CYP2D6P10635 497 aa10.83□□□□□ -0.68
VPS11-203ENST00000529545 AKR1B1P15121 316 aa10.83□□□□□ -0.68
VPS11-203ENST00000529545 KCNA10Q16322 511 aa10.83□□□□□ -0.68
VPS11-203ENST00000529545 CLEC10AQ8IUN9 316 aa10.83□□□□□ -0.68
VPS11-203ENST00000529545 SIAH1Q8IUQ4 282 aa10.83□□□□□ -0.68
VPS11-203ENST00000529545 ITPRIPQ8IWB1 547 aa10.83□□□□□ -0.68
VPS11-203ENST00000529545 DNAJC2Q99543 621 aaKnown RBP10.83□□□□□ -0.68
VPS11-203ENST00000529545 MTIF3Q9H2K0 278 aaKnown RBP10.83□□□□□ -0.68
VPS11-203ENST00000529545 KANSL2Q9H9L4 492 aa10.83□□□□□ -0.68
VPS11-203ENST00000529545 ZSWIM6Q9HCJ5 1215 aa10.83□□□□□ -0.68
VPS11-203ENST00000529545 ATP8A2Q9NTI2 1148 aa10.83□□□□□ -0.68
VPS11-203ENST00000529545 MSRAQ9UJ68 235 aa10.83□□□□□ -0.68
VPS11-203ENST00000529545 ZHX1Q9UKY1 873 aaPredicted RBP10.83□□□□□ -0.68
VPS11-203ENST00000529545 PPP1R9AQ9ULJ8 1098 aa10.83□□□□□ -0.68
VPS11-203ENST00000529545 CTDP1Q9Y5B0 961 aaPredicted RBP10.83□□□□□ -0.68
VPS11-203ENST00000529545 PARP14Q460N5 1801 aa10.83□□□□□ -0.68
VPS11-203ENST00000529545 SYNGAP1Q96PV0 1343 aa10.83□□□□□ -0.68
VPS11-203ENST00000529545 SYNRGQ9UMZ2 1314 aa10.83□□□□□ -0.68
VPS11-203ENST00000529545 GOLIM4O00461 696 aa10.82□□□□□ -0.68
VPS11-203ENST00000529545 DUSP11O75319 330 aaKnown RBP10.82□□□□□ -0.68
VPS11-203ENST00000529545 C6orf222P0C671 652 aaPredicted RBP10.82□□□□□ -0.68
VPS11-203ENST00000529545 EEF2P13639 858 aaKnown RBP10.82□□□□□ -0.68
VPS11-203ENST00000529545 IGFBP4P22692 258 aa10.82□□□□□ -0.68
VPS11-203ENST00000529545 CDK8P49336 464 aa10.82□□□□□ -0.68
VPS11-203ENST00000529545 MRPS5P82675 430 aaKnown RBP10.82□□□□□ -0.68
VPS11-203ENST00000529545 RAB30Q15771 203 aa10.82□□□□□ -0.68
VPS11-203ENST00000529545 PSRC1Q6PGN9 363 aaPredicted RBP10.82□□□□□ -0.68
VPS11-203ENST00000529545 LCORLQ8N3X6 602 aa10.82□□□□□ -0.68
VPS11-203ENST00000529545 KLHDC9Q8NEP7 349 aa10.82□□□□□ -0.68
VPS11-203ENST00000529545 LENG1Q96BZ8 264 aaPredicted RBP10.82□□□□□ -0.68
VPS11-203ENST00000529545 ASB2Q96Q27 587 aa10.82□□□□□ -0.68
VPS11-203ENST00000529545 TEX13BQ9BXU2 312 aa10.82□□□□□ -0.68
VPS11-203ENST00000529545 PBX4Q9BYU1 374 aa10.82□□□□□ -0.68
VPS11-203ENST00000529545 PRDM12Q9H4Q4 367 aa10.82□□□□□ -0.68
VPS11-203ENST00000529545 ARMT1Q9H993 441 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms