RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 APOBRQ0VD83 1088 aa16.36■□□□□ 0.21
USF1-209ENST00000529476 IKQ13123 557 aaPredicted RBP16.36■□□□□ 0.21
USF1-209ENST00000529476 TOB2Q14106 344 aaPredicted RBP16.36■□□□□ 0.21
USF1-209ENST00000529476 GRM4Q14833 912 aa16.36■□□□□ 0.21
USF1-209ENST00000529476 FBXL16Q8N461 479 aa16.36■□□□□ 0.21
USF1-209ENST00000529476 AGXT2Q9BYV1 514 aa16.36■□□□□ 0.21
USF1-209ENST00000529476 HOXC10Q9NYD6 342 aa16.36■□□□□ 0.21
USF1-209ENST00000529476 PPP1R9AQ9ULJ8 1098 aa16.36■□□□□ 0.21
USF1-209ENST00000529476 SLC12A7Q9Y666 1083 aa16.36■□□□□ 0.21
USF1-209ENST00000529476 KLF18A0A0U1RQI7 1052 aa16.35■□□□□ 0.21
USF1-209ENST00000529476 RXRAP19793 462 aa16.35■□□□□ 0.21
USF1-209ENST00000529476 GCLCP48506 637 aaPredicted RBP16.35■□□□□ 0.21
USF1-209ENST00000529476 NEK4P51957 841 aa16.35■□□□□ 0.21
USF1-209ENST00000529476 STAT2P52630 851 aa16.35■□□□□ 0.21
USF1-209ENST00000529476 APOA5Q6Q788 366 aa16.35■□□□□ 0.21
USF1-209ENST00000529476 C17orf99Q6UX52 265 aa16.35■□□□□ 0.21
USF1-209ENST00000529476 FAM160B2Q86V87 743 aa16.35■□□□□ 0.21
USF1-209ENST00000529476 STAG2Q8N3U4 1231 aa16.35■□□□□ 0.21
USF1-209ENST00000529476 ANKRD13CQ8N6S4 541 aa16.35■□□□□ 0.21
USF1-209ENST00000529476 CHURC1Q8WUH1 139 aa16.35■□□□□ 0.21
USF1-209ENST00000529476 KIFC2Q96AC6 838 aa16.35■□□□□ 0.21
USF1-209ENST00000529476 LARP6Q9BRS8 491 aaKnown RBP16.35■□□□□ 0.21
USF1-209ENST00000529476 PAGR1Q9BTK6 254 aa16.35■□□□□ 0.21
USF1-209ENST00000529476 CPVLQ9H3G5 476 aa16.35■□□□□ 0.21
USF1-209ENST00000529476 TXNRD2Q9NNW7 524 aa16.35■□□□□ 0.21
USF1-209ENST00000529476 MAD2L2Q9UI95 211 aa16.35■□□□□ 0.21
USF1-209ENST00000529476 MYPNQ86TC9 1320 aa16.35■□□□□ 0.21
USF1-209ENST00000529476 MKI67P46013 3256 aaKnown RBP16.34■□□□□ 0.21
USF1-209ENST00000529476 POTEFA5A3E0 1075 aa16.34■□□□□ 0.21
USF1-209ENST00000529476 PALM3A6NDB9 673 aaPredicted RBP16.34■□□□□ 0.21
USF1-209ENST00000529476 PLA2G6O60733 806 aa16.34■□□□□ 0.21
USF1-209ENST00000529476 CNMDO75829 334 aa16.34■□□□□ 0.21
USF1-209ENST00000529476 BCRP11274 1271 aa16.34■□□□□ 0.21
USF1-209ENST00000529476 ASPRV1Q53RT3 343 aa16.34■□□□□ 0.21
USF1-209ENST00000529476 GPATCH4Q5T3I0 446 aaKnown RBP16.34■□□□□ 0.21
USF1-209ENST00000529476 BTNL9Q6UXG8 535 aa16.34■□□□□ 0.21
USF1-209ENST00000529476 LBX2Q6XYB7 198 aa16.34■□□□□ 0.21
USF1-209ENST00000529476 SYNE3Q6ZMZ3 975 aa16.34■□□□□ 0.21
USF1-209ENST00000529476 MICU3Q86XE3 530 aa16.34■□□□□ 0.21
USF1-209ENST00000529476 CCDC144CPQ8IYA2 1237 aa16.34■□□□□ 0.21
USF1-209ENST00000529476 PRPF38AQ8NAV1 312 aaKnown RBP16.34■□□□□ 0.21
USF1-209ENST00000529476 UBA5Q9GZZ9 404 aa16.34■□□□□ 0.21
USF1-209ENST00000529476 BTBD7Q9P203 1132 aa16.34■□□□□ 0.21
USF1-209ENST00000529476 RBPJLQ9UBG7 517 aa16.34■□□□□ 0.21
USF1-209ENST00000529476 NAP1L2Q9ULW6 460 aaPredicted RBP16.34■□□□□ 0.21
USF1-209ENST00000529476 ADAMTS5Q9UNA0 930 aa16.34■□□□□ 0.21
USF1-209ENST00000529476 VWA5AO00534 786 aa16.33■□□□□ 0.2
USF1-209ENST00000529476 ZBTB43O43298 467 aa16.33■□□□□ 0.2
USF1-209ENST00000529476 CALM1P0DP23 149 aa16.33■□□□□ 0.2
USF1-209ENST00000529476 CALM2P0DP24 149 aa16.33■□□□□ 0.2
USF1-209ENST00000529476 CALM3P0DP25 149 aa16.33■□□□□ 0.2
USF1-209ENST00000529476 AK2P54819 239 aa16.33■□□□□ 0.2
USF1-209ENST00000529476 SNAP25P60880 206 aa16.33■□□□□ 0.2
USF1-209ENST00000529476 SYDE2Q5VT97 1194 aa16.33■□□□□ 0.2
USF1-209ENST00000529476 CTCFLQ8NI51 663 aaPredicted RBP16.33■□□□□ 0.2
USF1-209ENST00000529476 GTF3C2Q8WUA4 911 aaPredicted RBP16.33■□□□□ 0.2
USF1-209ENST00000529476 ALDH8A1Q9H2A2 487 aaPredicted RBP16.33■□□□□ 0.2
USF1-209ENST00000529476 PRR12Q9ULL5 1215 aa16.33■□□□□ 0.2
USF1-209ENST00000529476 ZSWIM8A7E2V4 1837 aa16.32■□□□□ 0.2
USF1-209ENST00000529476 GOLGA8BA8MQT2 603 aa16.32■□□□□ 0.2
USF1-209ENST00000529476 KLRF2D3W0D1 207 aa16.32■□□□□ 0.2
USF1-209ENST00000529476 EVCP57679 992 aa16.32■□□□□ 0.2
USF1-209ENST00000529476 FAM110CQ1W6H9 321 aa16.32■□□□□ 0.2
USF1-209ENST00000529476 Q3C1V9 767 aa16.32■□□□□ 0.2
USF1-209ENST00000529476 NOM1Q5C9Z4 860 aaKnown RBP16.32■□□□□ 0.2
USF1-209ENST00000529476 FANCBQ8NB91 859 aa16.32■□□□□ 0.2
USF1-209ENST00000529476 REPS2Q8NFH8 660 aa16.32■□□□□ 0.2
USF1-209ENST00000529476 MAP3K14Q99558 947 aa16.32■□□□□ 0.2
USF1-209ENST00000529476 MORF4L1Q9UBU8 362 aa16.32■□□□□ 0.2
USF1-209ENST00000529476 RABGAP1Q9Y3P9 1069 aa16.32■□□□□ 0.2
USF1-209ENST00000529476 GOLGA8AA7E2F4 631 aa16.31■□□□□ 0.2
USF1-209ENST00000529476 ZBED4O75132 1171 aa16.31■□□□□ 0.2
USF1-209ENST00000529476 ECM2O94769 699 aaPredicted RBP16.31■□□□□ 0.2
USF1-209ENST00000529476 KIF5BP33176 963 aa16.31■□□□□ 0.2
USF1-209ENST00000529476 ERVK-9P63128 1117 aa16.31■□□□□ 0.2
USF1-209ENST00000529476 ERVK-24P63145 666 aa16.31■□□□□ 0.2
USF1-209ENST00000529476 TMEM132BQ14DG7 1078 aa16.31■□□□□ 0.2
USF1-209ENST00000529476 RABEP1Q15276 862 aa16.31■□□□□ 0.2
USF1-209ENST00000529476 SLC35G1Q2M3R5 365 aa16.31■□□□□ 0.2
USF1-209ENST00000529476 NOL8Q76FK4 1167 aaKnown RBP16.31■□□□□ 0.2
USF1-209ENST00000529476 NBPF11Q86T75 865 aa16.31■□□□□ 0.2
USF1-209ENST00000529476 MB21D1Q8N884 522 aa16.31■□□□□ 0.2
USF1-209ENST00000529476 GPRC5AQ8NFJ5 357 aa16.31■□□□□ 0.2
USF1-209ENST00000529476 SLC38A10Q9HBR0 1119 aa16.31■□□□□ 0.2
USF1-209ENST00000529476 BAZ2BQ9UIF8 2168 aaKnown RBP16.31■□□□□ 0.2
USF1-209ENST00000529476 MGAMO43451 1857 aa16.31■□□□□ 0.2
USF1-209ENST00000529476 MYH6P13533 1939 aa16.3■□□□□ 0.2
USF1-209ENST00000529476 FKTNO75072 461 aa16.3■□□□□ 0.2
USF1-209ENST00000529476 PLEKHA8P1O95397 391 aa16.3■□□□□ 0.2
USF1-209ENST00000529476 PDIA3P30101 505 aaKnown RBP16.3■□□□□ 0.2
USF1-209ENST00000529476 SP3Q02447 781 aa16.3■□□□□ 0.2
USF1-209ENST00000529476 PLS1Q14651 629 aa16.3■□□□□ 0.2
USF1-209ENST00000529476 RTN1Q16799 776 aa16.3■□□□□ 0.2
USF1-209ENST00000529476 ADGRF4Q8IZF3 695 aa16.3■□□□□ 0.2
USF1-209ENST00000529476 CPXCR1Q8N123 301 aa16.3■□□□□ 0.2
USF1-209ENST00000529476 VAT1LQ9HCJ6 419 aa16.3■□□□□ 0.2
USF1-209ENST00000529476 TPCN1Q9ULQ1 816 aa16.3■□□□□ 0.2
USF1-209ENST00000529476 CTDP1Q9Y5B0 961 aaPredicted RBP16.3■□□□□ 0.2
USF1-209ENST00000529476 DHX16O60231 1041 aaKnown RBP16.29■□□□□ 0.2
USF1-209ENST00000529476 CDC27P30260 824 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms