RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 ARPP21Q9UBL0 812 aaPredicted RBP17.93■□□□□ 0.46
TM9SF1-208ENST00000529332 V9GY48 417 aaPredicted RBP17.93■□□□□ 0.46
TM9SF1-208ENST00000529332 PRPF3O43395 683 aaKnown RBP17.92■□□□□ 0.46
TM9SF1-208ENST00000529332 KRT2P35908 639 aa17.92■□□□□ 0.46
TM9SF1-208ENST00000529332 NOM1Q5C9Z4 860 aaKnown RBP17.92■□□□□ 0.46
TM9SF1-208ENST00000529332 AMOTL1Q8IY63 956 aa17.92■□□□□ 0.46
TM9SF1-208ENST00000529332 CERS5Q8N5B7 392 aa17.92■□□□□ 0.46
TM9SF1-208ENST00000529332 DCP1AQ9NPI6 582 aaPredicted RBP17.92■□□□□ 0.46
TM9SF1-208ENST00000529332 ZHX1Q9UKY1 873 aaPredicted RBP17.92■□□□□ 0.46
TM9SF1-208ENST00000529332 TTF2Q9UNY4 1162 aaKnown RBP17.92■□□□□ 0.46
TM9SF1-208ENST00000529332 FER1L6Q2WGJ9 1857 aa17.92■□□□□ 0.46
TM9SF1-208ENST00000529332 ZSCAN12O43309 604 aa17.92■□□□□ 0.46
TM9SF1-208ENST00000529332 PCP11498 1178 aaKnown RBP17.92■□□□□ 0.46
TM9SF1-208ENST00000529332 EVX2Q03828 476 aa17.92■□□□□ 0.46
TM9SF1-208ENST00000529332 TROAPQ12815 778 aa17.92■□□□□ 0.46
TM9SF1-208ENST00000529332 IFIT1BQ5T764 474 aaKnown RBP17.92■□□□□ 0.46
TM9SF1-208ENST00000529332 SH3RF3Q8TEJ3 882 aaPredicted RBP17.92■□□□□ 0.46
TM9SF1-208ENST00000529332 FOCADQ5VW36 1801 aa17.92■□□□□ 0.46
TM9SF1-208ENST00000529332 XBP1P17861 261 aa17.91■□□□□ 0.46
TM9SF1-208ENST00000529332 ERCC5P28715 1186 aaPredicted RBP17.91■□□□□ 0.46
TM9SF1-208ENST00000529332 CASP1P29466 404 aa17.91■□□□□ 0.46
TM9SF1-208ENST00000529332 NR1I3Q14994 352 aa17.91■□□□□ 0.46
TM9SF1-208ENST00000529332 NPY5RQ15761 445 aa17.91■□□□□ 0.46
TM9SF1-208ENST00000529332 TOGARAM2Q6ZUX3 1019 aa17.91■□□□□ 0.46
TM9SF1-208ENST00000529332 SH3RF1Q7Z6J0 888 aa17.91■□□□□ 0.46
TM9SF1-208ENST00000529332 CATIPQ7Z7H3 387 aa17.91■□□□□ 0.46
TM9SF1-208ENST00000529332 STX10O60499 249 aa17.9■□□□□ 0.46
TM9SF1-208ENST00000529332 FGRP09769 529 aa17.9■□□□□ 0.46
TM9SF1-208ENST00000529332 CD44P16070 742 aaKnown RBP17.9■□□□□ 0.46
TM9SF1-208ENST00000529332 AFMP43652 599 aa17.9■□□□□ 0.46
TM9SF1-208ENST00000529332 SBK1Q52WX2 424 aa17.9■□□□□ 0.46
TM9SF1-208ENST00000529332 DACT2Q5SW24 774 aa17.9■□□□□ 0.46
TM9SF1-208ENST00000529332 APTXQ7Z2E3 356 aaKnown RBP17.9■□□□□ 0.46
TM9SF1-208ENST00000529332 LARGE2Q8N3Y3 721 aa17.9■□□□□ 0.46
TM9SF1-208ENST00000529332 SYMPKQ92797 1274 aaKnown RBP17.9■□□□□ 0.46
TM9SF1-208ENST00000529332 TNFRSF25Q93038 417 aa17.9■□□□□ 0.46
TM9SF1-208ENST00000529332 PAGE5Q96GU1 130 aa17.9■□□□□ 0.46
TM9SF1-208ENST00000529332 F8W031 263 aaPredicted RBP17.9■□□□□ 0.46
TM9SF1-208ENST00000529332 URI1O94763 535 aaPredicted RBP17.9■□□□□ 0.46
TM9SF1-208ENST00000529332 SLFN14P0C7P3 912 aa17.9■□□□□ 0.46
TM9SF1-208ENST00000529332 CTR9Q6PD62 1173 aa17.9■□□□□ 0.46
TM9SF1-208ENST00000529332 KRT222Q8N1A0 295 aa17.9■□□□□ 0.46
TM9SF1-208ENST00000529332 TEKT1Q969V4 418 aa17.9■□□□□ 0.46
TM9SF1-208ENST00000529332 DAGLAQ9Y4D2 1042 aa17.9■□□□□ 0.46
TM9SF1-208ENST00000529332 A0A1B0GTH6 734 aa17.89■□□□□ 0.45
TM9SF1-208ENST00000529332 USP17L12C9JPN9 530 aa17.89■□□□□ 0.45
TM9SF1-208ENST00000529332 USP17L21D6R901 530 aa17.89■□□□□ 0.45
TM9SF1-208ENST00000529332 ARHGAP29Q52LW3 1261 aa17.89■□□□□ 0.45
TM9SF1-208ENST00000529332 HHIPL2Q6UWX4 724 aa17.89■□□□□ 0.45
TM9SF1-208ENST00000529332 TEX11Q8IYF3 940 aa17.89■□□□□ 0.45
TM9SF1-208ENST00000529332 FAM177A1Q8N128 213 aaPredicted RBP17.89■□□□□ 0.45
TM9SF1-208ENST00000529332 SPON1Q9HCB6 807 aa17.89■□□□□ 0.45
TM9SF1-208ENST00000529332 RBM28Q9NW13 759 aaKnown RBP17.89■□□□□ 0.45
TM9SF1-208ENST00000529332 ARFGEF1Q9Y6D6 1849 aa17.89■□□□□ 0.45
TM9SF1-208ENST00000529332 TEX33O43247 280 aa17.89■□□□□ 0.45
TM9SF1-208ENST00000529332 CUL4BQ13620 913 aa17.89■□□□□ 0.45
TM9SF1-208ENST00000529332 ZNF174Q15697 407 aa17.89■□□□□ 0.45
TM9SF1-208ENST00000529332 TMTC3Q6ZXV5 915 aa17.89■□□□□ 0.45
TM9SF1-208ENST00000529332 IQCA1Q86XH1 822 aa17.89■□□□□ 0.45
TM9SF1-208ENST00000529332 WDR24Q96S15 920 aa17.89■□□□□ 0.45
TM9SF1-208ENST00000529332 ZNF277Q9NRM2 450 aaPredicted RBP17.89■□□□□ 0.45
TM9SF1-208ENST00000529332 MCM9Q9NXL9 1143 aa17.89■□□□□ 0.45
TM9SF1-208ENST00000529332 DDX60LQ5H9U9 1706 aaKnown RBP17.89■□□□□ 0.45
TM9SF1-208ENST00000529332 CLCN6P51797 869 aa17.88■□□□□ 0.45
TM9SF1-208ENST00000529332 HDLBPQ00341 1268 aaKnown RBP17.88■□□□□ 0.45
TM9SF1-208ENST00000529332 DPYDQ12882 1025 aa17.88■□□□□ 0.45
TM9SF1-208ENST00000529332 FERMT2Q96AC1 680 aa17.88■□□□□ 0.45
TM9SF1-208ENST00000529332 MXD3Q9BW11 206 aa17.88■□□□□ 0.45
TM9SF1-208ENST00000529332 MRIQ9BWK5 157 aa17.88■□□□□ 0.45
TM9SF1-208ENST00000529332 KCNQ5Q9NR82 932 aa17.88■□□□□ 0.45
TM9SF1-208ENST00000529332 MYH1P12882 1939 aa17.88■□□□□ 0.45
TM9SF1-208ENST00000529332 MYO3BQ8WXR4 1341 aa17.88■□□□□ 0.45
TM9SF1-208ENST00000529332 CNTNAP5Q8WYK1 1306 aa17.88■□□□□ 0.45
TM9SF1-208ENST00000529332 NMT2O60551 498 aa17.87■□□□□ 0.45
TM9SF1-208ENST00000529332 TADA3O75528 432 aa17.87■□□□□ 0.45
TM9SF1-208ENST00000529332 STX17P56962 302 aa17.87■□□□□ 0.45
TM9SF1-208ENST00000529332 GABPB1Q06547 395 aaPredicted RBP17.87■□□□□ 0.45
TM9SF1-208ENST00000529332 SPATA1Q5VX52 437 aa17.87■□□□□ 0.45
TM9SF1-208ENST00000529332 KLHL10Q6JEL2 608 aa17.87■□□□□ 0.45
TM9SF1-208ENST00000529332 NIM1KQ8IY84 436 aa17.87■□□□□ 0.45
TM9SF1-208ENST00000529332 SMYD4Q8IYR2 804 aaPredicted RBP17.87■□□□□ 0.45
TM9SF1-208ENST00000529332 SRBD1Q8N5C6 995 aaKnown RBP17.87■□□□□ 0.45
TM9SF1-208ENST00000529332 TGFBRAP1Q8WUH2 860 aa17.87■□□□□ 0.45
TM9SF1-208ENST00000529332 CARD6Q9BX69 1037 aa17.87■□□□□ 0.45
TM9SF1-208ENST00000529332 TAOK3Q9H2K8 898 aa17.87■□□□□ 0.45
TM9SF1-208ENST00000529332 MKRN1Q9UHC7 482 aaKnown RBP17.87■□□□□ 0.45
TM9SF1-208ENST00000529332 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.87■□□□□ 0.45
TM9SF1-208ENST00000529332 ADAMTSL1Q8N6G6 1762 aa17.87■□□□□ 0.45
TM9SF1-208ENST00000529332 DDAH1O94760 285 aa17.87■□□□□ 0.45
TM9SF1-208ENST00000529332 CALM1P0DP23 149 aa17.87■□□□□ 0.45
TM9SF1-208ENST00000529332 CALM2P0DP24 149 aa17.87■□□□□ 0.45
TM9SF1-208ENST00000529332 CALM3P0DP25 149 aa17.87■□□□□ 0.45
TM9SF1-208ENST00000529332 NT5C2P49902 561 aa17.87■□□□□ 0.45
TM9SF1-208ENST00000529332 TTC38Q5R3I4 469 aa17.87■□□□□ 0.45
TM9SF1-208ENST00000529332 DESI2Q9BSY9 194 aa17.87■□□□□ 0.45
TM9SF1-208ENST00000529332 SRRTQ9BXP5 876 aaKnown RBP17.87■□□□□ 0.45
TM9SF1-208ENST00000529332 SYNRGQ9UMZ2 1314 aa17.86■□□□□ 0.45
TM9SF1-208ENST00000529332 SCNN1DP51172 638 aa17.86■□□□□ 0.45
TM9SF1-208ENST00000529332 RHBDL3P58872 404 aa17.86■□□□□ 0.45
TM9SF1-208ENST00000529332 MTF1Q14872 753 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms