RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 UCN2Q96RP3 112 aa7.4□□□□□ -1.22
ATPAF1-209ENST00000529214 ZCCHC17Q9NP64 241 aaKnown RBP7.4□□□□□ -1.22
ATPAF1-209ENST00000529214 INCENPQ9NQS7 918 aa7.4□□□□□ -1.22
ATPAF1-209ENST00000529214 CTNNA3Q9UI47 895 aa7.4□□□□□ -1.22
ATPAF1-209ENST00000529214 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.4□□□□□ -1.22
ATPAF1-209ENST00000529214 TACC3Q9Y6A5 838 aa7.4□□□□□ -1.22
ATPAF1-209ENST00000529214 DDX60LQ5H9U9 1706 aaKnown RBP7.4□□□□□ -1.23
ATPAF1-209ENST00000529214 OTOFQ9HC10 1997 aa7.39□□□□□ -1.23
ATPAF1-209ENST00000529214 THSD7BQ9C0I4 1608 aa7.39□□□□□ -1.23
ATPAF1-209ENST00000529214 BAZ2AQ9UIF9 1905 aaKnown RBP7.39□□□□□ -1.23
ATPAF1-209ENST00000529214 A0A1W2PRG0 241 aa7.39□□□□□ -1.23
ATPAF1-209ENST00000529214 PRDM1O75626 825 aa7.39□□□□□ -1.23
ATPAF1-209ENST00000529214 TBC1D8O95759 1140 aa7.39□□□□□ -1.23
ATPAF1-209ENST00000529214 CTCFP49711 727 aaPredicted RBP7.39□□□□□ -1.23
ATPAF1-209ENST00000529214 HMGCS2P54868 508 aa7.39□□□□□ -1.23
ATPAF1-209ENST00000529214 MARSP56192 900 aaKnown RBP7.39□□□□□ -1.23
ATPAF1-209ENST00000529214 MTMR2Q13614 643 aa7.39□□□□□ -1.23
ATPAF1-209ENST00000529214 METTL3Q86U44 580 aaKnown RBP7.39□□□□□ -1.23
ATPAF1-209ENST00000529214 NEDD1Q8NHV4 660 aa7.39□□□□□ -1.23
ATPAF1-209ENST00000529214 ACER1Q8TDN7 264 aa7.39□□□□□ -1.23
ATPAF1-209ENST00000529214 ZNF830Q96NB3 372 aaPredicted RBP7.39□□□□□ -1.23
ATPAF1-209ENST00000529214 ESYT1Q9BSJ8 1104 aa7.39□□□□□ -1.23
ATPAF1-209ENST00000529214 KIAA1683Q9H0B3 1180 aa7.39□□□□□ -1.23
ATPAF1-209ENST00000529214 R3HDMLQ9H3Y0 253 aa7.39□□□□□ -1.23
ATPAF1-209ENST00000529214 ALG2Q9H553 416 aa7.39□□□□□ -1.23
ATPAF1-209ENST00000529214 KANSL2Q9H9L4 492 aa7.39□□□□□ -1.23
ATPAF1-209ENST00000529214 CDHR5Q9HBB8 845 aa7.39□□□□□ -1.23
ATPAF1-209ENST00000529214 SLC45A1Q9Y2W3 748 aa7.39□□□□□ -1.23
ATPAF1-209ENST00000529214 MAFBQ9Y5Q3 323 aaPredicted RBP7.39□□□□□ -1.23
ATPAF1-209ENST00000529214 NAV1Q8NEY1 1877 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 IGKV6D-41A0A0C4DH26 115 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 PDHXO00330 501 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 ORC4O43929 436 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 CDC45O75419 566 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 HSPA8P11142 646 aaKnown RBP7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 PCP11498 1178 aaKnown RBP7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 EEF2P13639 858 aaKnown RBP7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 HOXA7P31268 230 aaPredicted RBP7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 LBX1P52954 281 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 USP14P54578 494 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 HAND2P61296 217 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 TFAP4Q01664 338 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 VAC14Q08AM6 782 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 DGKZQ13574 1117 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 IMMTQ16891 758 aaKnown RBP7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 FAM47AQ5JRC9 791 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 AKNAD1Q5T1N1 836 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 USP17L2Q6R6M4 530 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 GADL1Q6ZQY3 521 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 MFSD6Q6ZSS7 791 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 NOL8Q76FK4 1167 aaKnown RBP7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 STAG1Q8WVM7 1258 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 NLRP7Q8WX94 980 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 MKL1Q969V6 931 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 SGSM3Q96HU1 749 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 C12orf42Q96LP6 360 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 NBPF3Q9H094 633 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 ZFYVE28Q9HCC9 887 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 PLA2G2EQ9NZK7 142 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 NYAP2Q9P242 653 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 TSKSQ9UJT2 592 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 AGTPBP1Q9UPW5 1226 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 TMX2Q9Y320 296 aa7.38□□□□□ -1.23
ATPAF1-209ENST00000529214 SOWAHDA6NJG2 315 aa7.37□□□□□ -1.23
ATPAF1-209ENST00000529214 GPR25O00155 361 aa7.37□□□□□ -1.23
ATPAF1-209ENST00000529214 TLR2O60603 784 aa7.37□□□□□ -1.23
ATPAF1-209ENST00000529214 CYP21A2P08686 494 aa7.37□□□□□ -1.23
ATPAF1-209ENST00000529214 TSPY3P0CV98 308 aa7.37□□□□□ -1.23
ATPAF1-209ENST00000529214 TSPY8P0CW00 308 aa7.37□□□□□ -1.23
ATPAF1-209ENST00000529214 ICA1Q05084 483 aa7.37□□□□□ -1.23
ATPAF1-209ENST00000529214 CRHR2Q13324 411 aa7.37□□□□□ -1.23
ATPAF1-209ENST00000529214 TAF1CQ15572 869 aaPredicted RBP7.37□□□□□ -1.23
ATPAF1-209ENST00000529214 NBPF20Q3BBV1 942 aa7.37□□□□□ -1.23
ATPAF1-209ENST00000529214 TREML2Q5T2D2 321 aa7.37□□□□□ -1.23
ATPAF1-209ENST00000529214 CASC1Q6TDU7 716 aa7.37□□□□□ -1.23
ATPAF1-209ENST00000529214 KIAA1211Q6ZU35 1233 aa7.37□□□□□ -1.23
ATPAF1-209ENST00000529214 NBPF11Q86T75 865 aa7.37□□□□□ -1.23
ATPAF1-209ENST00000529214 CEP120Q8N960 986 aa7.37□□□□□ -1.23
ATPAF1-209ENST00000529214 LSG1Q9H089 658 aaKnown RBP7.37□□□□□ -1.23
ATPAF1-209ENST00000529214 RNF41Q9H4P4 317 aaPredicted RBP7.37□□□□□ -1.23
ATPAF1-209ENST00000529214 ARHGEF10LQ9HCE6 1279 aa7.37□□□□□ -1.23
ATPAF1-209ENST00000529214 NPDC1Q9NQX5 325 aaPredicted RBP7.37□□□□□ -1.23
ATPAF1-209ENST00000529214 IL17RBQ9NRM6 502 aa7.37□□□□□ -1.23
ATPAF1-209ENST00000529214 TCP11L1Q9NUJ3 509 aa7.37□□□□□ -1.23
ATPAF1-209ENST00000529214 MTMR4Q9NYA4 1195 aa7.37□□□□□ -1.23
ATPAF1-209ENST00000529214 TMOD4Q9NZQ9 345 aa7.37□□□□□ -1.23
ATPAF1-209ENST00000529214 DOCK1Q14185 1865 aa7.37□□□□□ -1.23
ATPAF1-209ENST00000529214 TSPY2A6NKD2 308 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 TTC36A6NLP5 189 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 SPTLC1O15269 473 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 RANBP6O60518 1105 aaKnown RBP7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 NOVP48745 357 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 NT5C2P49902 561 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 PABPC4Q13310 644 aaKnown RBP eCLIP7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 NECTIN1Q15223 517 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 ZYXQ15942 572 aaKnown RBP7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 CSPP1Q1MSJ5 1256 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 FOXD4L6Q3SYB3 417 aaPredicted RBP7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 PHLDB3Q6NSJ2 640 aa7.36□□□□□ -1.23
ATPAF1-209ENST00000529214 C17orf99Q6UX52 265 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms