RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 HMMRO75330 724 aa16.21■□□□□ 0.19
HIF3A-212ENST00000529205 KLHDC9Q8NEP7 349 aa16.21■□□□□ 0.19
HIF3A-212ENST00000529205 ATXN2LQ8WWM7 1075 aaKnown RBP16.21■□□□□ 0.19
HIF3A-212ENST00000529205 SLF1Q9BQI6 1058 aa16.21■□□□□ 0.19
HIF3A-212ENST00000529205 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.21■□□□□ 0.19
HIF3A-212ENST00000529205 SLC4A4Q9Y6R1 1079 aa16.21■□□□□ 0.19
HIF3A-212ENST00000529205 ZBED4O75132 1171 aa16.2■□□□□ 0.18
HIF3A-212ENST00000529205 C6orf222P0C671 652 aaPredicted RBP16.2■□□□□ 0.18
HIF3A-212ENST00000529205 RLBP1P12271 317 aa16.2■□□□□ 0.18
HIF3A-212ENST00000529205 SLC4A3P48751 1232 aa16.2■□□□□ 0.18
HIF3A-212ENST00000529205 SNRNP48Q6IEG0 339 aaKnown RBP16.2■□□□□ 0.18
HIF3A-212ENST00000529205 PSRC1Q6PGN9 363 aaPredicted RBP16.2■□□□□ 0.18
HIF3A-212ENST00000529205 MAMDC4Q6UXC1 1216 aa16.2■□□□□ 0.18
HIF3A-212ENST00000529205 ZNF467Q7Z7K2 595 aaPredicted RBP16.2■□□□□ 0.18
HIF3A-212ENST00000529205 PRPF38AQ8NAV1 312 aaKnown RBP16.2■□□□□ 0.18
HIF3A-212ENST00000529205 IL27Q8NEV9 243 aa16.2■□□□□ 0.18
HIF3A-212ENST00000529205 PPM1EQ8WY54 764 aa16.2■□□□□ 0.18
HIF3A-212ENST00000529205 LENG1Q96BZ8 264 aaPredicted RBP16.2■□□□□ 0.18
HIF3A-212ENST00000529205 MTIF3Q9H2K0 278 aaKnown RBP16.2■□□□□ 0.18
HIF3A-212ENST00000529205 BOLA2Q9H3K6 86 aa16.2■□□□□ 0.18
HIF3A-212ENST00000529205 MSRAQ9UJ68 235 aa16.2■□□□□ 0.18
HIF3A-212ENST00000529205 DNAH12Q6ZR08 3092 aa16.2■□□□□ 0.18
HIF3A-212ENST00000529205 A0A0U1RQG5 324 aaPredicted RBP16.19■□□□□ 0.18
HIF3A-212ENST00000529205 RAB11FIP3O75154 756 aa16.19■□□□□ 0.18
HIF3A-212ENST00000529205 ASGR1P07306 291 aa16.19■□□□□ 0.18
HIF3A-212ENST00000529205 MS4A1P11836 297 aa16.19■□□□□ 0.18
HIF3A-212ENST00000529205 CST5P28325 142 aaPredicted RBP16.19■□□□□ 0.18
HIF3A-212ENST00000529205 ACVR2BQ13705 512 aa16.19■□□□□ 0.18
HIF3A-212ENST00000529205 UBE3CQ15386 1083 aa16.19■□□□□ 0.18
HIF3A-212ENST00000529205 RPAP2Q8IXW5 612 aaPredicted RBP16.19■□□□□ 0.18
HIF3A-212ENST00000529205 ANKRD35Q8N283 1001 aa16.19■□□□□ 0.18
HIF3A-212ENST00000529205 ABHD16BQ9H3Z7 469 aa16.19■□□□□ 0.18
HIF3A-212ENST00000529205 MKNK2Q9HBH9 465 aa16.19■□□□□ 0.18
HIF3A-212ENST00000529205 ARPP21Q9UBL0 812 aaPredicted RBP16.19■□□□□ 0.18
HIF3A-212ENST00000529205 TBX21Q9UL17 535 aa16.19■□□□□ 0.18
HIF3A-212ENST00000529205 MYH8P13535 1937 aa16.18■□□□□ 0.18
HIF3A-212ENST00000529205 CYP2D7A0A087X1C5 515 aa16.18■□□□□ 0.18
HIF3A-212ENST00000529205 ARVCFO00192 962 aa16.18■□□□□ 0.18
HIF3A-212ENST00000529205 SNAI1O95863 264 aaPredicted RBP16.18■□□□□ 0.18
HIF3A-212ENST00000529205 RAB30Q15771 203 aa16.18■□□□□ 0.18
HIF3A-212ENST00000529205 GNASQ5JWF2 1037 aa16.18■□□□□ 0.18
HIF3A-212ENST00000529205 AKNAD1Q5T1N1 836 aa16.18■□□□□ 0.18
HIF3A-212ENST00000529205 CCSAPQ6IQ19 270 aaPredicted RBP16.18■□□□□ 0.18
HIF3A-212ENST00000529205 CTR9Q6PD62 1173 aa16.18■□□□□ 0.18
HIF3A-212ENST00000529205 CPXCR1Q8N123 301 aa16.18■□□□□ 0.18
HIF3A-212ENST00000529205 REPS2Q8NFH8 660 aa16.18■□□□□ 0.18
HIF3A-212ENST00000529205 FBXO40Q9UH90 709 aa16.18■□□□□ 0.18
HIF3A-212ENST00000529205 ZNFX1Q9P2E3 1918 aaKnown RBP16.17■□□□□ 0.18
HIF3A-212ENST00000529205 F5H6K3 240 aa16.17■□□□□ 0.18
HIF3A-212ENST00000529205 ATP2A1O14983 1001 aa16.17■□□□□ 0.18
HIF3A-212ENST00000529205 CSF2RAP15509 400 aa16.17■□□□□ 0.18
HIF3A-212ENST00000529205 ATP5JP18859 108 aa16.17■□□□□ 0.18
HIF3A-212ENST00000529205 COL9A1P20849 921 aa16.17■□□□□ 0.18
HIF3A-212ENST00000529205 CDK7P50613 346 aa16.17■□□□□ 0.18
HIF3A-212ENST00000529205 KLRC3Q07444 240 aa16.17■□□□□ 0.18
HIF3A-212ENST00000529205 TMEM240Q5SV17 173 aa16.17■□□□□ 0.18
HIF3A-212ENST00000529205 USP38Q8NB14 1042 aa16.17■□□□□ 0.18
HIF3A-212ENST00000529205 PBX4Q9BYU1 374 aa16.17■□□□□ 0.18
HIF3A-212ENST00000529205 TSPYL2Q9H2G4 693 aaPredicted RBP16.17■□□□□ 0.18
HIF3A-212ENST00000529205 ZNF287Q9HBT7 754 aa16.17■□□□□ 0.18
HIF3A-212ENST00000529205 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.17■□□□□ 0.18
HIF3A-212ENST00000529205 NYAP2Q9P242 653 aa16.17■□□□□ 0.18
HIF3A-212ENST00000529205 THEGQ9P2T0 379 aa16.17■□□□□ 0.18
HIF3A-212ENST00000529205 DNAJC25-GNG10A0A024R161 153 aa16.16■□□□□ 0.18
HIF3A-212ENST00000529205 GJA9P57773 515 aa16.16■□□□□ 0.18
HIF3A-212ENST00000529205 ZNF365Q70YC5 407 aa16.16■□□□□ 0.18
HIF3A-212ENST00000529205 CHST13Q8NET6 341 aa16.16■□□□□ 0.18
HIF3A-212ENST00000529205 ASB2Q96Q27 587 aa16.16■□□□□ 0.18
HIF3A-212ENST00000529205 HAUS7Q99871 368 aa16.16■□□□□ 0.18
HIF3A-212ENST00000529205 PPP1R12CQ9BZL4 782 aa16.16■□□□□ 0.18
HIF3A-212ENST00000529205 PRDM12Q9H4Q4 367 aa16.16■□□□□ 0.18
HIF3A-212ENST00000529205 PLXNA1Q9UIW2 1896 aa16.16■□□□□ 0.18
HIF3A-212ENST00000529205 ZBED9Q6R2W3 1325 aa16.16■□□□□ 0.18
HIF3A-212ENST00000529205 COL11A1P12107 1806 aaPredicted RBP16.15■□□□□ 0.18
HIF3A-212ENST00000529205 MYADML2A6NDP7 307 aa16.15■□□□□ 0.18
HIF3A-212ENST00000529205 SMCHD1A6NHR9 2005 aa16.15■□□□□ 0.18
HIF3A-212ENST00000529205 FGBP02675 491 aa16.15■□□□□ 0.18
HIF3A-212ENST00000529205 IGFBP4P22692 258 aa16.15■□□□□ 0.18
HIF3A-212ENST00000529205 PBX2P40425 430 aa16.15■□□□□ 0.18
HIF3A-212ENST00000529205 MRPS5P82675 430 aaKnown RBP16.15■□□□□ 0.18
HIF3A-212ENST00000529205 CCDC144BQ3MJ40 725 aa16.15■□□□□ 0.18
HIF3A-212ENST00000529205 KIFC2Q96AC6 838 aa16.15■□□□□ 0.18
HIF3A-212ENST00000529205 NUP88Q99567 741 aaPredicted RBP16.15■□□□□ 0.18
HIF3A-212ENST00000529205 CHMP4BQ9H444 224 aaKnown RBP16.15■□□□□ 0.18
HIF3A-212ENST00000529205 SLC28A3Q9HAS3 691 aa16.15■□□□□ 0.18
HIF3A-212ENST00000529205 CLIP2Q9UDT6 1046 aa16.15■□□□□ 0.18
HIF3A-212ENST00000529205 FEM1BQ9UK73 627 aa16.15■□□□□ 0.18
HIF3A-212ENST00000529205 RIPK3Q9Y572 518 aa16.15■□□□□ 0.18
HIF3A-212ENST00000529205 PARP14Q460N5 1801 aa16.15■□□□□ 0.18
HIF3A-212ENST00000529205 GRXCR1A8MXD5 290 aa16.14■□□□□ 0.17
HIF3A-212ENST00000529205 SMIM22K7EJ46 135 aa16.14■□□□□ 0.17
HIF3A-212ENST00000529205 CABYRO75952 493 aa16.14■□□□□ 0.17
HIF3A-212ENST00000529205 ACRP10323 421 aa16.14■□□□□ 0.17
HIF3A-212ENST00000529205 OAZ1P54368 228 aa16.14■□□□□ 0.17
HIF3A-212ENST00000529205 SLFNL1Q499Z3 407 aa16.14■□□□□ 0.17
HIF3A-212ENST00000529205 SBK1Q52WX2 424 aa16.14■□□□□ 0.17
HIF3A-212ENST00000529205 RASIP1Q5U651 963 aa16.14■□□□□ 0.17
HIF3A-212ENST00000529205 NOL8Q76FK4 1167 aaKnown RBP16.14■□□□□ 0.17
HIF3A-212ENST00000529205 C16orf59Q7L2K0 433 aa16.14■□□□□ 0.17
HIF3A-212ENST00000529205 FAM126BQ8IXS8 530 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms