RNA–Protein interactions for RNA: ENST00000529199.1

CTSF-206, Transcript of cathepsin F, humanhuman

TSL 4

Gene CTSF, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-206ENST00000529199 ZBED4O75132 1171 aa23.8■■□□□ 1.4
CTSF-206ENST00000529199 TDO2P48775 406 aa23.8■■□□□ 1.4
CTSF-206ENST00000529199 GIMAP6Q6P9H5 292 aa23.8■■□□□ 1.4
CTSF-206ENST00000529199 APPBP2Q92624 585 aa23.8■■□□□ 1.4
CTSF-206ENST00000529199 RIPK3Q9Y572 518 aa23.8■■□□□ 1.4
CTSF-206ENST00000529199 ZNFX1Q9P2E3 1918 aaKnown RBP23.79■■□□□ 1.4
CTSF-206ENST00000529199 A0A1W2PQ45 241 aaPredicted RBP23.79■■□□□ 1.4
CTSF-206ENST00000529199 A0A1W2PQY0 241 aa23.79■■□□□ 1.4
CTSF-206ENST00000529199 PRDM1O75626 825 aa23.79■■□□□ 1.4
CTSF-206ENST00000529199 CLTBP09497 229 aa23.79■■□□□ 1.4
CTSF-206ENST00000529199 KIFC2Q96AC6 838 aa23.79■■□□□ 1.4
CTSF-206ENST00000529199 SMCHD1A6NHR9 2005 aa23.79■■□□□ 1.4
CTSF-206ENST00000529199 GPAA1O43292 621 aa23.78■■□□□ 1.4
CTSF-206ENST00000529199 SEMA6BQ9H3T3 888 aa23.78■■□□□ 1.4
CTSF-206ENST00000529199 RAVER2Q9HCJ3 691 aaKnown RBP23.78■■□□□ 1.4
CTSF-206ENST00000529199 TMEM39AQ9NV64 488 aa23.78■■□□□ 1.4
CTSF-206ENST00000529199 ZHX1Q9UKY1 873 aaPredicted RBP23.78■■□□□ 1.4
CTSF-206ENST00000529199 FAM184BQ9ULE4 1060 aa23.78■■□□□ 1.4
CTSF-206ENST00000529199 UNC80Q8N2C7 3258 aa23.78■■□□□ 1.4
CTSF-206ENST00000529199 RAG1P15918 1043 aa23.77■■□□□ 1.4
CTSF-206ENST00000529199 ITGB8P26012 769 aa23.77■■□□□ 1.4
CTSF-206ENST00000529199 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.77■■□□□ 1.4
CTSF-206ENST00000529199 ZNF287Q9HBT7 754 aa23.77■■□□□ 1.4
CTSF-206ENST00000529199 EPB41L4AQ9HCS5 686 aaPredicted RBP23.77■■□□□ 1.4
CTSF-206ENST00000529199 COL11A1P12107 1806 aaPredicted RBP23.77■■□□□ 1.4
CTSF-206ENST00000529199 M0R2C6 588 aa23.76■■□□□ 1.39
CTSF-206ENST00000529199 SNAI1O95863 264 aaPredicted RBP23.76■■□□□ 1.39
CTSF-206ENST00000529199 ZFYP08048 801 aaPredicted RBP23.76■■□□□ 1.39
CTSF-206ENST00000529199 GNAT2P19087 354 aa23.76■■□□□ 1.39
CTSF-206ENST00000529199 ACLYP53396 1101 aa23.76■■□□□ 1.39
CTSF-206ENST00000529199 MSL3Q8N5Y2 521 aaKnown RBP23.76■■□□□ 1.39
CTSF-206ENST00000529199 CDX2Q99626 313 aaPredicted RBP23.76■■□□□ 1.39
CTSF-206ENST00000529199 DCTPP1Q9H773 170 aa23.76■■□□□ 1.39
CTSF-206ENST00000529199 ISY1Q9ULR0 285 aaKnown RBP23.76■■□□□ 1.39
CTSF-206ENST00000529199 PATL2C9JE40 543 aaKnown RBP23.75■■□□□ 1.39
CTSF-206ENST00000529199 ADAMTS4O75173 837 aa23.75■■□□□ 1.39
CTSF-206ENST00000529199 ANKRD35Q8N283 1001 aa23.75■■□□□ 1.39
CTSF-206ENST00000529199 CEP95Q96GE4 821 aa23.75■■□□□ 1.39
CTSF-206ENST00000529199 TSEN34Q9BSV6 310 aaKnown RBP23.75■■□□□ 1.39
CTSF-206ENST00000529199 STARD7Q9NQZ5 370 aa23.75■■□□□ 1.39
CTSF-206ENST00000529199 PARP14Q460N5 1801 aa23.75■■□□□ 1.39
CTSF-206ENST00000529199 IGKV6D-41A0A0C4DH26 115 aa23.74■■□□□ 1.39
CTSF-206ENST00000529199 KIAA0355O15063 1070 aa23.74■■□□□ 1.39
CTSF-206ENST00000529199 EPHB4P54760 987 aa23.74■■□□□ 1.39
CTSF-206ENST00000529199 SMAD3P84022 425 aaKnown RBP23.74■■□□□ 1.39
CTSF-206ENST00000529199 KCNA10Q16322 511 aa23.74■■□□□ 1.39
CTSF-206ENST00000529199 LRRC47Q8N1G4 583 aaKnown RBP23.74■■□□□ 1.39
CTSF-206ENST00000529199 NUP133Q8WUM0 1156 aa23.74■■□□□ 1.39
CTSF-206ENST00000529199 MKL1Q969V6 931 aa23.74■■□□□ 1.39
CTSF-206ENST00000529199 CHMP4CQ96CF2 233 aa23.74■■□□□ 1.39
CTSF-206ENST00000529199 RNPC3Q96LT9 517 aaKnown RBP23.74■■□□□ 1.39
CTSF-206ENST00000529199 MTMR4Q9NYA4 1195 aa23.74■■□□□ 1.39
CTSF-206ENST00000529199 FEM1BQ9UK73 627 aa23.74■■□□□ 1.39
CTSF-206ENST00000529199 LTBP2Q14767 1821 aa23.74■■□□□ 1.39
CTSF-206ENST00000529199 SYNGAP1Q96PV0 1343 aa23.74■■□□□ 1.39
CTSF-206ENST00000529199 SYNRGQ9UMZ2 1314 aa23.74■■□□□ 1.39
CTSF-206ENST00000529199 MYH7P12883 1935 aa23.74■■□□□ 1.39
CTSF-206ENST00000529199 DNAJC25-GNG10A0A024R161 153 aa23.73■■□□□ 1.39
CTSF-206ENST00000529199 DCDC2CA8MYV0 355 aa23.73■■□□□ 1.39
CTSF-206ENST00000529199 ATP2A1O14983 1001 aa23.73■■□□□ 1.39
CTSF-206ENST00000529199 TTLL1O95922 423 aa23.73■■□□□ 1.39
CTSF-206ENST00000529199 ACVR2BQ13705 512 aa23.73■■□□□ 1.39
CTSF-206ENST00000529199 MAMDC4Q6UXC1 1216 aa23.73■■□□□ 1.39
CTSF-206ENST00000529199 IFNL3Q8IZI9 196 aa23.73■■□□□ 1.39
CTSF-206ENST00000529199 VTI1AQ96AJ9 217 aa23.73■■□□□ 1.39
CTSF-206ENST00000529199 SLC38A10Q9HBR0 1119 aa23.73■■□□□ 1.39
CTSF-206ENST00000529199 HOMER2Q9NSB8 354 aa23.73■■□□□ 1.39
CTSF-206ENST00000529199 ROBO3Q96MS0 1386 aa23.73■■□□□ 1.39
CTSF-206ENST00000529199 TSPY3P0CV98 308 aa23.72■■□□□ 1.39
CTSF-206ENST00000529199 TSPY8P0CW00 308 aa23.72■■□□□ 1.39
CTSF-206ENST00000529199 FPGSQ05932 587 aa23.72■■□□□ 1.39
CTSF-206ENST00000529199 FAAP100Q0VG06 881 aa23.72■■□□□ 1.39
CTSF-206ENST00000529199 LRRFIP1Q32MZ4 808 aaKnown RBP23.72■■□□□ 1.39
CTSF-206ENST00000529199 SLFN13Q68D06 897 aa23.72■■□□□ 1.39
CTSF-206ENST00000529199 SEC62Q99442 399 aaKnown RBP23.72■■□□□ 1.39
CTSF-206ENST00000529199 NACAP1Q9BZK3 213 aa23.72■■□□□ 1.39
CTSF-206ENST00000529199 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.72■■□□□ 1.39
CTSF-206ENST00000529199 MOXD2PA6NHM9 499 aa23.71■■□□□ 1.39
CTSF-206ENST00000529199 DUSP11O75319 330 aaKnown RBP23.71■■□□□ 1.39
CTSF-206ENST00000529199 C6orf222P0C671 652 aaPredicted RBP23.71■■□□□ 1.39
CTSF-206ENST00000529199 IRX5P78411 483 aaPredicted RBP23.71■■□□□ 1.39
CTSF-206ENST00000529199 ZNF467Q7Z7K2 595 aaPredicted RBP23.71■■□□□ 1.39
CTSF-206ENST00000529199 KLHDC9Q8NEP7 349 aa23.71■■□□□ 1.39
CTSF-206ENST00000529199 MYLIPQ8WY64 445 aa23.71■■□□□ 1.39
CTSF-206ENST00000529199 TOX2Q96NM4 488 aa23.71■■□□□ 1.39
CTSF-206ENST00000529199 COL25A1Q9BXS0 654 aaPredicted RBP23.71■■□□□ 1.39
CTSF-206ENST00000529199 TTYH1Q9H313 450 aaPredicted RBP23.71■■□□□ 1.39
CTSF-206ENST00000529199 FBXO40Q9UH90 709 aa23.71■■□□□ 1.39
CTSF-206ENST00000529199 MYADML2A6NDP7 307 aa23.7■■□□□ 1.38
CTSF-206ENST00000529199 BMP3P12645 472 aa23.7■■□□□ 1.38
CTSF-206ENST00000529199 TFAP4Q01664 338 aa23.7■■□□□ 1.38
CTSF-206ENST00000529199 PDE4BQ07343 736 aa23.7■■□□□ 1.38
CTSF-206ENST00000529199 IKQ13123 557 aaPredicted RBP23.7■■□□□ 1.38
CTSF-206ENST00000529199 CCDC144BQ3MJ40 725 aa23.7■■□□□ 1.38
CTSF-206ENST00000529199 ANKRD33Q7Z3H0 272 aa23.7■■□□□ 1.38
CTSF-206ENST00000529199 GMCL1P1Q8NEA9 526 aa23.7■■□□□ 1.38
CTSF-206ENST00000529199 CHST13Q8NET6 341 aa23.7■■□□□ 1.38
CTSF-206ENST00000529199 GLT1D1Q96MS3 346 aa23.7■■□□□ 1.38
CTSF-206ENST00000529199 ABHD16BQ9H3Z7 469 aa23.7■■□□□ 1.38
CTSF-206ENST00000529199 SPC25Q9HBM1 224 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms