RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 TM4SF4P48230 202 aa13.32□□□□□ -0.28
CAPN1-217ENST00000529133 STAT2P52630 851 aa13.32□□□□□ -0.28
CAPN1-217ENST00000529133 IRX3P78415 501 aaPredicted RBP13.32□□□□□ -0.28
CAPN1-217ENST00000529133 IKQ13123 557 aaPredicted RBP13.32□□□□□ -0.28
CAPN1-217ENST00000529133 PPP2R5BQ15173 497 aa13.32□□□□□ -0.28
CAPN1-217ENST00000529133 SYDE2Q5VT97 1194 aa13.32□□□□□ -0.28
CAPN1-217ENST00000529133 NBPF11Q86T75 865 aa13.32□□□□□ -0.28
CAPN1-217ENST00000529133 IFNL1Q8IU54 200 aa13.32□□□□□ -0.28
CAPN1-217ENST00000529133 CMTR1Q8N1G2 835 aaKnown RBP13.32□□□□□ -0.28
CAPN1-217ENST00000529133 SRBD1Q8N5C6 995 aaKnown RBP13.32□□□□□ -0.28
CAPN1-217ENST00000529133 CHURC1Q8WUH1 139 aa13.32□□□□□ -0.28
CAPN1-217ENST00000529133 LZTS2Q9BRK4 669 aa13.32□□□□□ -0.28
CAPN1-217ENST00000529133 UBA5Q9GZZ9 404 aa13.32□□□□□ -0.28
CAPN1-217ENST00000529133 ASCC2Q9H1I8 757 aaPredicted RBP13.32□□□□□ -0.28
CAPN1-217ENST00000529133 ZCCHC17Q9NP64 241 aaKnown RBP13.32□□□□□ -0.28
CAPN1-217ENST00000529133 PPP1R9AQ9ULJ8 1098 aa13.32□□□□□ -0.28
CAPN1-217ENST00000529133 MYPNQ86TC9 1320 aa13.32□□□□□ -0.28
CAPN1-217ENST00000529133 SPDYE16A6NNV3 312 aaPredicted RBP13.31□□□□□ -0.28
CAPN1-217ENST00000529133 K7ELQ4 463 aaPredicted RBP13.31□□□□□ -0.28
CAPN1-217ENST00000529133 OSBPP22059 807 aa13.31□□□□□ -0.28
CAPN1-217ENST00000529133 MAP2K2P36507 400 aa13.31□□□□□ -0.28
CAPN1-217ENST00000529133 FUT2Q10981 343 aa13.31□□□□□ -0.28
CAPN1-217ENST00000529133 COG2Q14746 738 aa13.31□□□□□ -0.28
CAPN1-217ENST00000529133 NTRK3Q16288 839 aa13.31□□□□□ -0.28
CAPN1-217ENST00000529133 SAMD1Q6SPF0 538 aaPredicted RBP13.31□□□□□ -0.28
CAPN1-217ENST00000529133 CCDC83Q8IWF9 413 aa13.31□□□□□ -0.28
CAPN1-217ENST00000529133 HSCBQ8IWL3 235 aa13.31□□□□□ -0.28
CAPN1-217ENST00000529133 REM2Q8IYK8 340 aaPredicted RBP13.31□□□□□ -0.28
CAPN1-217ENST00000529133 KIFC2Q96AC6 838 aa13.31□□□□□ -0.28
CAPN1-217ENST00000529133 ATG4CQ96DT6 458 aa13.31□□□□□ -0.28
CAPN1-217ENST00000529133 SPZ1Q9BXG8 430 aa13.31□□□□□ -0.28
CAPN1-217ENST00000529133 PNMA3Q9UL41 463 aa13.31□□□□□ -0.28
CAPN1-217ENST00000529133 PRR12Q9ULL5 1215 aa13.31□□□□□ -0.28
CAPN1-217ENST00000529133 CNTNAP5Q8WYK1 1306 aa13.31□□□□□ -0.28
CAPN1-217ENST00000529133 CYTH3O43739 400 aa13.3□□□□□ -0.28
CAPN1-217ENST00000529133 CYP2C8P10632 490 aa13.3□□□□□ -0.28
CAPN1-217ENST00000529133 SMARCA1P28370 1054 aa13.3□□□□□ -0.28
CAPN1-217ENST00000529133 DSG3P32926 999 aa13.3□□□□□ -0.28
CAPN1-217ENST00000529133 ADGRF4Q8IZF3 695 aa13.3□□□□□ -0.28
CAPN1-217ENST00000529133 PRPF38AQ8NAV1 312 aaKnown RBP13.3□□□□□ -0.28
CAPN1-217ENST00000529133 PARK7Q99497 189 aaKnown RBP13.3□□□□□ -0.28
CAPN1-217ENST00000529133 P2RX7Q99572 595 aaKnown RBP13.3□□□□□ -0.28
CAPN1-217ENST00000529133 RIOX1Q9H6W3 641 aa13.3□□□□□ -0.28
CAPN1-217ENST00000529133 JMJD4Q9H9V9 463 aa13.3□□□□□ -0.28
CAPN1-217ENST00000529133 CPLX1O14810 134 aa13.29□□□□□ -0.28
CAPN1-217ENST00000529133 DHX16O60231 1041 aaKnown RBP13.29□□□□□ -0.28
CAPN1-217ENST00000529133 CTDNEP1O95476 244 aa13.29□□□□□ -0.28
CAPN1-217ENST00000529133 IFNAR1P17181 557 aa13.29□□□□□ -0.28
CAPN1-217ENST00000529133 SNAP25P60880 206 aa13.29□□□□□ -0.28
CAPN1-217ENST00000529133 HERVK_113P62684 666 aa13.29□□□□□ -0.28
CAPN1-217ENST00000529133 OTUD7BQ6GQQ9 843 aa13.29□□□□□ -0.28
CAPN1-217ENST00000529133 CPLX2Q6PUV4 134 aaKnown RBP13.29□□□□□ -0.28
CAPN1-217ENST00000529133 POTEEQ6S8J3 1075 aa13.29□□□□□ -0.28
CAPN1-217ENST00000529133 LBX2Q6XYB7 198 aa13.29□□□□□ -0.28
CAPN1-217ENST00000529133 CCDC82Q8N4S0 544 aa13.29□□□□□ -0.28
CAPN1-217ENST00000529133 NSUN7Q8NE18 718 aaKnown RBP13.29□□□□□ -0.28
CAPN1-217ENST00000529133 MTMR8Q96EF0 704 aa13.29□□□□□ -0.28
CAPN1-217ENST00000529133 RANBP17Q9H2T7 1088 aaKnown RBP13.29□□□□□ -0.28
CAPN1-217ENST00000529133 VAT1LQ9HCJ6 419 aa13.29□□□□□ -0.28
CAPN1-217ENST00000529133 HOXC10Q9NYD6 342 aa13.29□□□□□ -0.28
CAPN1-217ENST00000529133 ADAMTS5Q9UNA0 930 aa13.29□□□□□ -0.28
CAPN1-217ENST00000529133 A0A0G2JMZ2 1700 aa13.29□□□□□ -0.28
CAPN1-217ENST00000529133 ADGRA2Q96PE1 1338 aa13.29□□□□□ -0.28
CAPN1-217ENST00000529133 VWA5AO00534 786 aa13.28□□□□□ -0.28
CAPN1-217ENST00000529133 DTNBO60941 627 aa13.28□□□□□ -0.28
CAPN1-217ENST00000529133 PPFIA3O75145 1194 aa13.28□□□□□ -0.28
CAPN1-217ENST00000529133 CDKL5O76039 1030 aa13.28□□□□□ -0.28
CAPN1-217ENST00000529133 CUL4AQ13619 759 aa13.28□□□□□ -0.28
CAPN1-217ENST00000529133 TAF1CQ15572 869 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-217ENST00000529133 CDC37Q16543 378 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-217ENST00000529133 HOMER1Q86YM7 354 aa13.28□□□□□ -0.28
CAPN1-217ENST00000529133 REPS2Q8NFH8 660 aa13.28□□□□□ -0.28
CAPN1-217ENST00000529133 SMCR8Q8TEV9 937 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-217ENST00000529133 PIBF1Q8WXW3 757 aa13.28□□□□□ -0.28
CAPN1-217ENST00000529133 PHKBQ93100 1093 aa13.28□□□□□ -0.28
CAPN1-217ENST00000529133 PIGSQ96S52 555 aa13.28□□□□□ -0.28
CAPN1-217ENST00000529133 SLC38A10Q9HBR0 1119 aa13.28□□□□□ -0.28
CAPN1-217ENST00000529133 RLFQ13129 1914 aa13.28□□□□□ -0.28
CAPN1-217ENST00000529133 PARP14Q460N5 1801 aa13.27□□□□□ -0.28
CAPN1-217ENST00000529133 hCG_1642624A0A1W2PR95 340 aa13.27□□□□□ -0.29
CAPN1-217ENST00000529133 PTPDC1A2A3K4 754 aa13.27□□□□□ -0.29
CAPN1-217ENST00000529133 JAK2O60674 1132 aa13.27□□□□□ -0.29
CAPN1-217ENST00000529133 ZBED4O75132 1171 aa13.27□□□□□ -0.29
CAPN1-217ENST00000529133 CNMDO75829 334 aa13.27□□□□□ -0.29
CAPN1-217ENST00000529133 FMNL1O95466 1100 aaPredicted RBP13.27□□□□□ -0.29
CAPN1-217ENST00000529133 ALDH1A1P00352 501 aa13.27□□□□□ -0.29
CAPN1-217ENST00000529133 FDX1P10109 184 aa13.27□□□□□ -0.29
CAPN1-217ENST00000529133 QRICH1Q2TAL8 776 aa13.27□□□□□ -0.29
CAPN1-217ENST00000529133 CCDC174Q6PII3 467 aa13.27□□□□□ -0.29
CAPN1-217ENST00000529133 DNAJC5GQ8N7S2 189 aa13.27□□□□□ -0.29
CAPN1-217ENST00000529133 MB21D1Q8N884 522 aa13.27□□□□□ -0.29
CAPN1-217ENST00000529133 GTF3C2Q8WUA4 911 aaPredicted RBP13.27□□□□□ -0.29
CAPN1-217ENST00000529133 RRP36Q96EU6 259 aaKnown RBP13.27□□□□□ -0.29
CAPN1-217ENST00000529133 LLPHQ9BRT6 129 aaKnown RBP13.27□□□□□ -0.29
CAPN1-217ENST00000529133 SLC26A6Q9BXS9 759 aa13.27□□□□□ -0.29
CAPN1-217ENST00000529133 RNF26Q9BY78 433 aaPredicted RBP13.27□□□□□ -0.29
CAPN1-217ENST00000529133 RBM19Q9Y4C8 960 aaKnown RBP13.27□□□□□ -0.29
CAPN1-217ENST00000529133 V9GY48 417 aaPredicted RBP13.27□□□□□ -0.29
CAPN1-217ENST00000529133 STK36Q9NRP7 1315 aa13.27□□□□□ -0.29
CAPN1-217ENST00000529133 ZBTB5O15062 677 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms