RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 RBL2Q08999 1139 aa7.39□□□□□ -1.23
CSDE1-212ENST00000529046 GAB4Q2WGN9 574 aa7.39□□□□□ -1.23
CSDE1-212ENST00000529046 TSPYL5Q86VY4 417 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-212ENST00000529046 KIRREL1Q96J84 757 aa7.39□□□□□ -1.23
CSDE1-212ENST00000529046 SLC9A7Q96T83 725 aa7.39□□□□□ -1.23
CSDE1-212ENST00000529046 KRTAP4-2Q9BYR5 136 aa7.39□□□□□ -1.23
CSDE1-212ENST00000529046 CUL7Q14999 1698 aa7.38□□□□□ -1.23
CSDE1-212ENST00000529046 MAPKBP1O60336 1514 aa7.38□□□□□ -1.23
CSDE1-212ENST00000529046 RUSC2Q8N2Y8 1516 aa7.38□□□□□ -1.23
CSDE1-212ENST00000529046 YBX3P16989 372 aaKnown RBP eCLIP7.38□□□□□ -1.231e-9■□□□□ 10.8
CSDE1-212ENST00000529046 FYB2Q5VWT5 728 aa7.38□□□□□ -1.23
CSDE1-212ENST00000529046 TANGO6Q9C0B7 1094 aa7.38□□□□□ -1.23
CSDE1-212ENST00000529046 ZNF408Q9H9D4 720 aa7.38□□□□□ -1.23
CSDE1-212ENST00000529046 PRKAG3Q9UGI9 489 aa7.38□□□□□ -1.23
CSDE1-212ENST00000529046 ABCC10Q5T3U5 1492 aa7.37□□□□□ -1.23
CSDE1-212ENST00000529046 DNAJC25-GNG10A0A024R161 153 aa7.37□□□□□ -1.23
CSDE1-212ENST00000529046 LTKP29376 864 aa7.37□□□□□ -1.23
CSDE1-212ENST00000529046 ETFBP38117 255 aa7.37□□□□□ -1.23
CSDE1-212ENST00000529046 RNF4P78317 190 aa7.37□□□□□ -1.23
CSDE1-212ENST00000529046 EGR3Q06889 387 aa7.37□□□□□ -1.23
CSDE1-212ENST00000529046 TTC6Q86TZ1 520 aa7.37□□□□□ -1.23
CSDE1-212ENST00000529046 TMEM59LQ9UK28 342 aa7.37□□□□□ -1.23
CSDE1-212ENST00000529046 CARMIL1Q5VZK9 1371 aa7.36□□□□□ -1.23
CSDE1-212ENST00000529046 KLF4O43474 513 aa7.36□□□□□ -1.23
CSDE1-212ENST00000529046 SSBP05455 408 aaKnown RBP eCLIP7.36□□□□□ -1.23
CSDE1-212ENST00000529046 GLI1P08151 1106 aa7.36□□□□□ -1.23
CSDE1-212ENST00000529046 RAC2P15153 192 aa7.36□□□□□ -1.23
CSDE1-212ENST00000529046 CLEC16AQ2KHT3 1053 aa7.36□□□□□ -1.23
CSDE1-212ENST00000529046 RALGPS1Q5JS13 557 aa7.36□□□□□ -1.23
CSDE1-212ENST00000529046 RUFY4Q6ZNE9 571 aa7.36□□□□□ -1.23
CSDE1-212ENST00000529046 CRBNQ96SW2 442 aa7.36□□□□□ -1.23
CSDE1-212ENST00000529046 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.36□□□□□ -1.233e-6■■□□□ 12
CSDE1-212ENST00000529046 ASCC2Q9H1I8 757 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-212ENST00000529046 FAM53CQ9NYF3 392 aa7.36□□□□□ -1.23
CSDE1-212ENST00000529046 A0A1W2PQH9 124 aa7.35□□□□□ -1.23
CSDE1-212ENST00000529046 SHISA3A0PJX4 238 aa7.35□□□□□ -1.23
CSDE1-212ENST00000529046 ZNF503-AS2A6NEH8 195 aa7.35□□□□□ -1.23
CSDE1-212ENST00000529046 LRRC10BA6NIK2 292 aa7.35□□□□□ -1.23
CSDE1-212ENST00000529046 FARP2O94887 1054 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-212ENST00000529046 C8AP07357 584 aa7.35□□□□□ -1.23
CSDE1-212ENST00000529046 ATP2B1P20020 1258 aa7.35□□□□□ -1.23
CSDE1-212ENST00000529046 POLR2BP30876 1174 aaKnown RBP7.35□□□□□ -1.23
CSDE1-212ENST00000529046 HK2P52789 917 aa7.35□□□□□ -1.23
CSDE1-212ENST00000529046 ZYXQ15942 572 aaKnown RBP7.35□□□□□ -1.23
CSDE1-212ENST00000529046 TNNI3KQ59H18 835 aa7.35□□□□□ -1.23
CSDE1-212ENST00000529046 TMEM67Q5HYA8 995 aa7.35□□□□□ -1.23
CSDE1-212ENST00000529046 ZNF648Q5T619 568 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-212ENST00000529046 CPLX3Q8WVH0 158 aa7.35□□□□□ -1.23
CSDE1-212ENST00000529046 DRC1Q96MC2 740 aa7.35□□□□□ -1.23
CSDE1-212ENST00000529046 PCDHA11Q9Y5I1 949 aa7.35□□□□□ -1.23
CSDE1-212ENST00000529046 NBPF6Q5VWK0 638 aa7.34□□□□□ -1.23
CSDE1-212ENST00000529046 FBXW10Q5XX13 1052 aa7.34□□□□□ -1.23
CSDE1-212ENST00000529046 UNC5AQ6ZN44 842 aa7.34□□□□□ -1.23
CSDE1-212ENST00000529046 TMEM192Q8IY95 271 aa7.34□□□□□ -1.23
CSDE1-212ENST00000529046 SYTL4Q96C24 671 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-212ENST00000529046 NBPF4Q96M43 638 aa7.34□□□□□ -1.23
CSDE1-212ENST00000529046 ADAMTS10Q9H324 1103 aa7.34□□□□□ -1.23
CSDE1-212ENST00000529046 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.34□□□□□ -1.237e-7■□□□□ 9.9
CSDE1-212ENST00000529046 SLC12A7Q9Y666 1083 aa7.34□□□□□ -1.23
CSDE1-212ENST00000529046 PTPRGP23470 1445 aa7.34□□□□□ -1.23
CSDE1-212ENST00000529046 TNIKQ9UKE5 1360 aa7.33□□□□□ -1.24
CSDE1-212ENST00000529046 LTBP3Q9NS15 1303 aa7.33□□□□□ -1.24
CSDE1-212ENST00000529046 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-212ENST00000529046 SMAD7O15105 426 aaKnown RBP7.33□□□□□ -1.24
CSDE1-212ENST00000529046 NMIQ13287 307 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-212ENST00000529046 MLANAQ16655 118 aa7.33□□□□□ -1.24
CSDE1-212ENST00000529046 MPZL3Q6UWV2 235 aa7.33□□□□□ -1.24
CSDE1-212ENST00000529046 ABHD4Q8TB40 342 aa7.33□□□□□ -1.24
CSDE1-212ENST00000529046 ANAPC16Q96DE5 110 aa7.33□□□□□ -1.24
CSDE1-212ENST00000529046 LIN37Q96GY3 246 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-212ENST00000529046 SUCOQ9UBS9 1254 aaKnown RBP7.33□□□□□ -1.24
CSDE1-212ENST00000529046 ZNF214Q9UL59 606 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-212ENST00000529046 MRVI1Q9Y6F6 885 aa7.33□□□□□ -1.24
CSDE1-212ENST00000529046 KIF13AQ9H1H9 1805 aa7.32□□□□□ -1.24
CSDE1-212ENST00000529046 UHRF1BP1LA0JNW5 1464 aa7.32□□□□□ -1.24
CSDE1-212ENST00000529046 ADCY10Q96PN6 1610 aa7.32□□□□□ -1.24
CSDE1-212ENST00000529046 CLEC3AO75596 197 aa7.32□□□□□ -1.24
CSDE1-212ENST00000529046 PMS1P54277 932 aaKnown RBP7.32□□□□□ -1.24
CSDE1-212ENST00000529046 NBPF12Q5TAG4 269 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-212ENST00000529046 ENOX1Q8TC92 643 aaKnown RBP7.32□□□□□ -1.24
CSDE1-212ENST00000529046 MYLIPQ8WY64 445 aa7.32□□□□□ -1.24
CSDE1-212ENST00000529046 PHAXQ9H814 394 aaKnown RBP7.32□□□□□ -1.24
CSDE1-212ENST00000529046 HPXP02790 462 aa7.31□□□□□ -1.24
CSDE1-212ENST00000529046 ZGLP1P0C6A0 271 aa7.31□□□□□ -1.24
CSDE1-212ENST00000529046 ERVFC1P60507 584 aa7.31□□□□□ -1.24
CSDE1-212ENST00000529046 SERINC3Q13530 473 aa7.31□□□□□ -1.24
CSDE1-212ENST00000529046 NBPF9Q3BBW0 867 aa7.31□□□□□ -1.24
CSDE1-212ENST00000529046 KSR1Q8IVT5 923 aa7.31□□□□□ -1.24
CSDE1-212ENST00000529046 SYTL5Q8TDW5 730 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-212ENST00000529046 UBXN4Q92575 508 aa7.31□□□□□ -1.24
CSDE1-212ENST00000529046 DHX38Q92620 1227 aaKnown RBP7.31□□□□□ -1.24
CSDE1-212ENST00000529046 DHRS1Q96LJ7 313 aa7.31□□□□□ -1.24
CSDE1-212ENST00000529046 SLC38A3Q99624 504 aa7.31□□□□□ -1.24
CSDE1-212ENST00000529046 HDAC8Q9BY41 377 aa7.31□□□□□ -1.24
CSDE1-212ENST00000529046 DIP2BQ9P265 1576 aa7.3□□□□□ -1.24
CSDE1-212ENST00000529046 STK10O94804 968 aaKnown RBP7.3□□□□□ -1.24
CSDE1-212ENST00000529046 RAB33AQ14088 237 aa7.3□□□□□ -1.24
CSDE1-212ENST00000529046 ANKRD39Q53RE8 183 aa7.3□□□□□ -1.24
CSDE1-212ENST00000529046 PDZD8Q8NEN9 1154 aa7.3□□□□□ -1.24
CSDE1-212ENST00000529046 KLHL6Q8WZ60 621 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms