RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.62	□□□□□ -0.23
PTP4A2-211	ENST00000528840	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.62	□□□□□ -0.23
PTP4A2-211	ENST00000528840		A0A1W2PQ45	241 aa	Predicted RBP	13.61	□□□□□ -0.23
PTP4A2-211	ENST00000528840		A0A1W2PQY0	241 aa		13.61	□□□□□ -0.23
PTP4A2-211	ENST00000528840	ZBED4	O75132	1171 aa		13.61	□□□□□ -0.23
PTP4A2-211	ENST00000528840	SNAI1	O95863	264 aa	Predicted RBP	13.61	□□□□□ -0.23
PTP4A2-211	ENST00000528840	RASA1	P20936	1047 aa		13.61	□□□□□ -0.23
PTP4A2-211	ENST00000528840	EPHB4	P54760	987 aa		13.61	□□□□□ -0.23
PTP4A2-211	ENST00000528840	SMAD3	P84022	425 aa	Known RBP	13.61	□□□□□ -0.23
PTP4A2-211	ENST00000528840	SBK1	Q52WX2	424 aa		13.61	□□□□□ -0.23
PTP4A2-211	ENST00000528840	SNRNP48	Q6IEG0	339 aa	Known RBP	13.61	□□□□□ -0.23
PTP4A2-211	ENST00000528840	PRPF38A	Q8NAV1	312 aa	Known RBP	13.61	□□□□□ -0.23
PTP4A2-211	ENST00000528840	ECHDC1	Q9NTX5	307 aa		13.61	□□□□□ -0.23
PTP4A2-211	ENST00000528840	NYAP2	Q9P242	653 aa		13.61	□□□□□ -0.23
PTP4A2-211	ENST00000528840	FAM184B	Q9ULE4	1060 aa		13.61	□□□□□ -0.23
PTP4A2-211	ENST00000528840	ZNF236	Q9UL36	1845 aa		13.6	□□□□□ -0.23
PTP4A2-211	ENST00000528840	KIAA0355	O15063	1070 aa		13.6	□□□□□ -0.23
PTP4A2-211	ENST00000528840	NDUFB10	O96000	172 aa		13.6	□□□□□ -0.23
PTP4A2-211	ENST00000528840	APP	P05067	770 aa		13.6	□□□□□ -0.23
PTP4A2-211	ENST00000528840	ACLY	P53396	1101 aa		13.6	□□□□□ -0.23
PTP4A2-211	ENST00000528840	KCNA10	Q16322	511 aa		13.6	□□□□□ -0.23
PTP4A2-211	ENST00000528840	DNAH12	Q6ZR08	3092 aa		13.6	□□□□□ -0.23
PTP4A2-211	ENST00000528840	MYLIP	Q8WY64	445 aa		13.6	□□□□□ -0.23
PTP4A2-211	ENST00000528840	OSBP2	Q969R2	916 aa		13.6	□□□□□ -0.23
PTP4A2-211	ENST00000528840	KIFC2	Q96AC6	838 aa		13.6	□□□□□ -0.23
PTP4A2-211	ENST00000528840	VTI1A	Q96AJ9	217 aa		13.6	□□□□□ -0.23
PTP4A2-211	ENST00000528840	TSEN34	Q9BSV6	310 aa	Known RBP	13.6	□□□□□ -0.23
PTP4A2-211	ENST00000528840	TEX13B	Q9BXU2	312 aa		13.6	□□□□□ -0.23
PTP4A2-211	ENST00000528840	RAVER2	Q9HCJ3	691 aa	Known RBP	13.6	□□□□□ -0.23
PTP4A2-211	ENST00000528840	STARD7	Q9NQZ5	370 aa		13.6	□□□□□ -0.23
PTP4A2-211	ENST00000528840	RCAN3	Q9UKA8	241 aa		13.6	□□□□□ -0.23
PTP4A2-211	ENST00000528840		A0A0G2JMZ2	1700 aa		13.59	□□□□□ -0.23
PTP4A2-211	ENST00000528840	MYH8	P13535	1937 aa		13.59	□□□□□ -0.23
PTP4A2-211	ENST00000528840	DCDC2C	A8MYV0	355 aa		13.59	□□□□□ -0.23
PTP4A2-211	ENST00000528840	RNF113A	O15541	343 aa	Known RBP	13.59	□□□□□ -0.23
PTP4A2-211	ENST00000528840	ADAMTS4	O75173	837 aa		13.59	□□□□□ -0.23
PTP4A2-211	ENST00000528840	FAAP100	Q0VG06	881 aa		13.59	□□□□□ -0.23
PTP4A2-211	ENST00000528840	C20orf194	Q5TEA3	1177 aa		13.59	□□□□□ -0.23
PTP4A2-211	ENST00000528840	GIMAP6	Q6P9H5	292 aa		13.59	□□□□□ -0.23
PTP4A2-211	ENST00000528840	MSL3	Q8N5Y2	521 aa	Known RBP	13.59	□□□□□ -0.23
PTP4A2-211	ENST00000528840	KBTBD3	Q8NAB2	608 aa		13.59	□□□□□ -0.23
PTP4A2-211	ENST00000528840	KLHDC9	Q8NEP7	349 aa		13.59	□□□□□ -0.23
PTP4A2-211	ENST00000528840	MAFA	Q8NHW3	353 aa	Predicted RBP	13.59	□□□□□ -0.23
PTP4A2-211	ENST00000528840	NUP133	Q8WUM0	1156 aa		13.59	□□□□□ -0.23
PTP4A2-211	ENST00000528840	RNPC3	Q96LT9	517 aa	Known RBP	13.59	□□□□□ -0.23
PTP4A2-211	ENST00000528840	TTYH1	Q9H313	450 aa	Predicted RBP	13.59	□□□□□ -0.23
PTP4A2-211	ENST00000528840	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.59	□□□□□ -0.23
PTP4A2-211	ENST00000528840	COL11A1	P12107	1806 aa	Predicted RBP	13.58	□□□□□ -0.24
PTP4A2-211	ENST00000528840	DNAJC25-GNG10	A0A024R161	153 aa		13.58	□□□□□ -0.24
PTP4A2-211	ENST00000528840	PRDM1	O75626	825 aa		13.58	□□□□□ -0.24
PTP4A2-211	ENST00000528840	TDO2	P48775	406 aa		13.58	□□□□□ -0.24
PTP4A2-211	ENST00000528840	IRX5	P78411	483 aa	Predicted RBP	13.58	□□□□□ -0.24
PTP4A2-211	ENST00000528840	FPGS	Q05932	587 aa		13.58	□□□□□ -0.24
PTP4A2-211	ENST00000528840	ACVR2B	Q13705	512 aa		13.58	□□□□□ -0.24
PTP4A2-211	ENST00000528840	TSHZ3	Q63HK5	1081 aa		13.58	□□□□□ -0.24
PTP4A2-211	ENST00000528840	MAMDC4	Q6UXC1	1216 aa		13.58	□□□□□ -0.24
PTP4A2-211	ENST00000528840	ANKRD35	Q8N283	1001 aa		13.58	□□□□□ -0.24
PTP4A2-211	ENST00000528840	APPBP2	Q92624	585 aa		13.58	□□□□□ -0.24
PTP4A2-211	ENST00000528840	MYADML2	A6NDP7	307 aa		13.57	□□□□□ -0.24
PTP4A2-211	ENST00000528840	PATL2	C9JE40	543 aa	Known RBP	13.57	□□□□□ -0.24
PTP4A2-211	ENST00000528840	DUSP11	O75319	330 aa	Known RBP	13.57	□□□□□ -0.24
PTP4A2-211	ENST00000528840	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.57	□□□□□ -0.24
PTP4A2-211	ENST00000528840	ANKRD33	Q7Z3H0	272 aa		13.57	□□□□□ -0.24
PTP4A2-211	ENST00000528840	MKL1	Q969V6	931 aa		13.57	□□□□□ -0.24
PTP4A2-211	ENST00000528840	CHMP4C	Q96CF2	233 aa		13.57	□□□□□ -0.24
PTP4A2-211	ENST00000528840	CEP95	Q96GE4	821 aa		13.57	□□□□□ -0.24
PTP4A2-211	ENST00000528840	GPATCH3	Q96I76	525 aa		13.57	□□□□□ -0.24
PTP4A2-211	ENST00000528840	TOX2	Q96NM4	488 aa		13.57	□□□□□ -0.24
PTP4A2-211	ENST00000528840	ZNF287	Q9HBT7	754 aa		13.57	□□□□□ -0.24
PTP4A2-211	ENST00000528840	FEM1B	Q9UK73	627 aa		13.57	□□□□□ -0.24
PTP4A2-211	ENST00000528840	SYNGAP1	Q96PV0	1343 aa		13.57	□□□□□ -0.24
PTP4A2-211	ENST00000528840	SYNRG	Q9UMZ2	1314 aa		13.57	□□□□□ -0.24
PTP4A2-211	ENST00000528840	LTBP2	Q14767	1821 aa		13.57	□□□□□ -0.24
PTP4A2-211	ENST00000528840	IGKV6D-41	A0A0C4DH26	115 aa		13.56	□□□□□ -0.24
PTP4A2-211	ENST00000528840	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.56	□□□□□ -0.24
PTP4A2-211	ENST00000528840	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.56	□□□□□ -0.24
PTP4A2-211	ENST00000528840	MOXD2P	A6NHM9	499 aa		13.56	□□□□□ -0.24
PTP4A2-211	ENST00000528840		M0R2C6	588 aa		13.56	□□□□□ -0.24
PTP4A2-211	ENST00000528840	ATP2A1	O14983	1001 aa		13.56	□□□□□ -0.24
PTP4A2-211	ENST00000528840	GPAA1	O43292	621 aa		13.56	□□□□□ -0.24
PTP4A2-211	ENST00000528840	TIMP1	P01033	207 aa		13.56	□□□□□ -0.24
PTP4A2-211	ENST00000528840	C6orf222	P0C671	652 aa	Predicted RBP	13.56	□□□□□ -0.24
PTP4A2-211	ENST00000528840	GNAT2	P19087	354 aa		13.56	□□□□□ -0.24
PTP4A2-211	ENST00000528840	CCDC144B	Q3MJ40	725 aa		13.56	□□□□□ -0.24
PTP4A2-211	ENST00000528840	GNAS	Q5JWF2	1037 aa		13.56	□□□□□ -0.24
PTP4A2-211	ENST00000528840	SLFN13	Q68D06	897 aa		13.56	□□□□□ -0.24
PTP4A2-211	ENST00000528840	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.56	□□□□□ -0.24
PTP4A2-211	ENST00000528840	IFNL3	Q8IZI9	196 aa		13.56	□□□□□ -0.24
PTP4A2-211	ENST00000528840	LRRC47	Q8N1G4	583 aa	Known RBP	13.56	□□□□□ -0.24
PTP4A2-211	ENST00000528840	GLT1D1	Q96MS3	346 aa		13.56	□□□□□ -0.24
PTP4A2-211	ENST00000528840	DCTPP1	Q9H773	170 aa		13.56	□□□□□ -0.24
PTP4A2-211	ENST00000528840	SPC25	Q9HBM1	224 aa		13.56	□□□□□ -0.24
PTP4A2-211	ENST00000528840	SLC38A10	Q9HBR0	1119 aa		13.56	□□□□□ -0.24
PTP4A2-211	ENST00000528840	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.56	□□□□□ -0.24
PTP4A2-211	ENST00000528840	MTMR4	Q9NYA4	1195 aa		13.56	□□□□□ -0.24
PTP4A2-211	ENST00000528840	ISY1	Q9ULR0	285 aa	Known RBP	13.56	□□□□□ -0.24
PTP4A2-211	ENST00000528840	PARP14	Q460N5	1801 aa		13.55	□□□□□ -0.24
PTP4A2-211	ENST00000528840	TTLL1	O95922	423 aa		13.55	□□□□□ -0.24
PTP4A2-211	ENST00000528840	ASGR1	P07306	291 aa		13.55	□□□□□ -0.24
PTP4A2-211	ENST00000528840	ZFY	P08048	801 aa	Predicted RBP	13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms