RNA–Protein interactions for RNA: ENST00000528395.1

TMX2-CTNND1-201, Transcript of TMX2-CTNND1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMX2-CTNND1, Length 585 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1-201ENST00000528395 HOXC6P09630 235 aa13.2□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 SNHG28P0DPA3 235 aa13.2□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 ERCC3P19447 782 aa13.2□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 RGS19P49795 217 aa13.2□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 MAP2K5Q13163 448 aa13.2□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 GRB14Q14449 540 aa13.2□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 WDR78Q5VTH9 848 aa13.2□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 RNF20Q5VTR2 975 aa13.2□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 BTNL9Q6UXG8 535 aa13.2□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 RALYLQ86SE5 291 aaKnown RBP13.2□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 ENAHQ8N8S7 591 aaPredicted RBP13.2□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 KIFC2Q96AC6 838 aa13.2□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 ZKSCAN3Q9BRR0 538 aa13.2□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 TMEM106CQ9BVX2 250 aa13.2□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 KAT14Q9H8E8 782 aa13.2□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 CTDP1Q9Y5B0 961 aaPredicted RBP13.2□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 TNKSO95271 1327 aa13.19□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 PDHBP11177 359 aa13.19□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 CAPN2P17655 700 aa13.19□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 IKQ13123 557 aaPredicted RBP13.19□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 GPATCH4Q5T3I0 446 aaKnown RBP13.19□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 KCTD1Q719H9 257 aa13.19□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 NCAPG2Q86XI2 1143 aa13.19□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 PNMA1Q8ND90 353 aa13.19□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 APBA2Q99767 749 aa13.19□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 MTA3Q9BTC8 594 aa13.19□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 BIN2Q9UBW5 565 aaPredicted RBP13.19□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 ISY1Q9ULR0 285 aaKnown RBP13.19□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 ERICH2A1L162 156 aa13.18□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 SLC27A2O14975 620 aa13.18□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 HMGCRP04035 888 aa13.18□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 FCER1AP12319 257 aa13.18□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 ELNP15502 786 aa13.18□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 CYP2B6P20813 491 aa13.18□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 ZNF543Q08ER8 600 aa13.18□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 SART3Q15020 963 aaKnown RBP13.18□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 SEC23AQ15436 765 aa13.18□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 CCDC96Q2M329 555 aa13.18□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 IFIT1BQ5T764 474 aaKnown RBP13.18□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 CREB3L3Q68CJ9 461 aa13.18□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 STOX1Q6ZVD7 989 aa13.18□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 CYB5R4Q7L1T6 521 aa13.18□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.18□□□□□ -0.38e-7■■□□□ 13.9
TMX2-CTNND1-201ENST00000528395 SLC5A4Q9NY91 659 aa13.18□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 PRR12Q9ULL5 1215 aa13.18□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 TAF6LQ9Y6J9 622 aa13.18□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 PLXNB2O15031 1838 aa13.18□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 EPB41L2O43491 1005 aaKnown RBP13.17□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 INHAP05111 366 aa13.17□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 TSGA10IPQ3SY00 556 aa13.17□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 SNRNP48Q6IEG0 339 aaKnown RBP13.17□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 MB21D2Q8IYB1 491 aaPredicted RBP13.17□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 CPXCR1Q8N123 301 aa13.17□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 CHST13Q8NET6 341 aa13.17□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 FBXO40Q9UH90 709 aa13.17□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 PNMA2Q9UL42 364 aa13.17□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 MTMR7Q9Y216 660 aa13.17□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 COL11A1P12107 1806 aaPredicted RBP13.17□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 IFIT3O14879 490 aaKnown RBP13.16□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 REC8O95072 547 aa13.16□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 GJB1P08034 283 aa13.16□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 ZKSCAN1P17029 563 aaPredicted RBP13.16□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 ADORA2AP29274 412 aa13.16□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 MCM5P33992 734 aa13.16□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 SOX10P56693 466 aa13.16□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 KCTD2Q14681 263 aa13.16□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 TKFCQ3LXA3 575 aa13.16□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 ASPRV1Q53RT3 343 aa13.16□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 SYDE2Q5VT97 1194 aa13.16□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 TTBK2Q6IQ55 1244 aa13.16□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 DPP9Q86TI2 863 aa13.16□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 TRIB2Q92519 343 aa13.16□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 MMP19Q99542 508 aa13.16□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 RAVER2Q9HCJ3 691 aaKnown RBP13.16□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 DIS3Q9Y2L1 958 aaKnown RBP13.16□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 RIPK3Q9Y572 518 aa13.16□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 ZNF236Q9UL36 1845 aa13.16□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 PARP1P09874 1014 aaKnown RBP13.15□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 CCL5P13501 91 aa13.15□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 KRT32Q14532 448 aa13.15□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 WTAPQ15007 396 aa13.15□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 MTFR1Q15390 333 aa13.15□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 MAP3K21Q5TCX8 1036 aa13.15□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 OLFML2BQ68BL8 750 aa13.15□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 RASGRP2Q7LDG7 609 aa13.15□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 TMTC2Q8N394 836 aa13.15□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 IGDCC4Q8TDY8 1250 aa13.15□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 CHMP4CQ96CF2 233 aa13.15□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 TMEM87BQ96K49 555 aa13.15□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 RNF208Q9H0X6 261 aa13.15□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 RANBP17Q9H2T7 1088 aaKnown RBP13.15□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 GPCPD1Q9NPB8 672 aa13.15□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 MKI67P46013 3256 aaKnown RBP13.15□□□□□ -0.3
TMX2-CTNND1-201ENST00000528395 RBBP6Q7Z6E9 1792 aaKnown RBP13.15□□□□□ -0.31
TMX2-CTNND1-201ENST00000528395 ZNF536O15090 1300 aa13.14□□□□□ -0.31
TMX2-CTNND1-201ENST00000528395 FRMPD2Q68DX3 1309 aaPredicted RBP13.14□□□□□ -0.31
TMX2-CTNND1-201ENST00000528395 RPTORQ8N122 1335 aa13.14□□□□□ -0.31
TMX2-CTNND1-201ENST00000528395 COBLO75128 1261 aa13.14□□□□□ -0.31
TMX2-CTNND1-201ENST00000528395 IGHA2P01877 340 aa13.14□□□□□ -0.31
TMX2-CTNND1-201ENST00000528395 ICAM1P05362 532 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms