RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 CHPF2Q9P2E5 772 aa5.08□□□□□ -1.6
CHD7-205ENST00000527825 PCDHB11Q9Y5F2 797 aa5.08□□□□□ -1.6
CHD7-205ENST00000527825 A0A0G2JLL6 359 aaPredicted RBP5.07□□□□□ -1.6
CHD7-205ENST00000527825 DNM1LO00429 736 aa5.07□□□□□ -1.6
CHD7-205ENST00000527825 ERC2O15083 957 aa5.07□□□□□ -1.6
CHD7-205ENST00000527825 MSCO60682 206 aa5.07□□□□□ -1.6
CHD7-205ENST00000527825 ALADP13716 330 aa5.07□□□□□ -1.6
CHD7-205ENST00000527825 IL1R1P14778 569 aa5.07□□□□□ -1.6
CHD7-205ENST00000527825 RAG1P15918 1043 aa5.07□□□□□ -1.6
CHD7-205ENST00000527825 ITGA6P23229 1130 aa5.07□□□□□ -1.6
CHD7-205ENST00000527825 PTGIRP43119 386 aa5.07□□□□□ -1.6
CHD7-205ENST00000527825 GCLCP48506 637 aaPredicted RBP5.07□□□□□ -1.6
CHD7-205ENST00000527825 ERVK-9P63128 1117 aa5.07□□□□□ -1.6
CHD7-205ENST00000527825 TRIM28Q13263 835 aaKnown RBP5.07□□□□□ -1.6
CHD7-205ENST00000527825 PABPC4Q13310 644 aaKnown RBP eCLIP5.07□□□□□ -1.6
CHD7-205ENST00000527825 MOGSQ13724 837 aa5.07□□□□□ -1.6
CHD7-205ENST00000527825 RAB30Q15771 203 aa5.07□□□□□ -1.6
CHD7-205ENST00000527825 TRIM60Q495X7 471 aa5.07□□□□□ -1.6
CHD7-205ENST00000527825 RNFT1Q5M7Z0 435 aa5.07□□□□□ -1.6
CHD7-205ENST00000527825 MFSD14BQ5SR56 506 aa5.07□□□□□ -1.6
CHD7-205ENST00000527825 FOXD4L5Q5VV16 416 aaPredicted RBP5.07□□□□□ -1.6
CHD7-205ENST00000527825 SLC39A5Q6ZMH5 540 aa5.07□□□□□ -1.6
CHD7-205ENST00000527825 PRRT2Q7Z6L0 340 aaPredicted RBP5.07□□□□□ -1.6
CHD7-205ENST00000527825 FAM83AQ86UY5 434 aa5.07□□□□□ -1.6
CHD7-205ENST00000527825 SOCS4Q8WXH5 440 aa5.07□□□□□ -1.6
CHD7-205ENST00000527825 HERVK_113Q902F9 699 aa5.07□□□□□ -1.6
CHD7-205ENST00000527825 JARID2Q92833 1246 aaPredicted RBP5.07□□□□□ -1.6
CHD7-205ENST00000527825 MYD88Q99836 296 aa5.07□□□□□ -1.6
CHD7-205ENST00000527825 ALG2Q9H553 416 aa5.07□□□□□ -1.6
CHD7-205ENST00000527825 SLC28A3Q9HAS3 691 aa5.07□□□□□ -1.6
CHD7-205ENST00000527825 PDLIM7Q9NR12 457 aa5.07□□□□□ -1.6
CHD7-205ENST00000527825 CWC25Q9NXE8 425 aaPredicted RBP5.07□□□□□ -1.6
CHD7-205ENST00000527825 DBF4Q9UBU7 674 aaPredicted RBP5.07□□□□□ -1.6
CHD7-205ENST00000527825 COG5Q9UP83 839 aa5.07□□□□□ -1.6
CHD7-205ENST00000527825 ZHX2Q9Y6X8 837 aa5.07□□□□□ -1.6
CHD7-205ENST00000527825 MAPK8IP3Q9UPT6 1336 aa5.06□□□□□ -1.6
CHD7-205ENST00000527825 CDC14CA4D256 554 aa5.06□□□□□ -1.6
CHD7-205ENST00000527825 A6NJR5 290 aa5.06□□□□□ -1.6
CHD7-205ENST00000527825 POM121CA8CG34 1229 aa5.06□□□□□ -1.6
CHD7-205ENST00000527825 ITGB8P26012 769 aa5.06□□□□□ -1.6
CHD7-205ENST00000527825 RGS2P41220 211 aa5.06□□□□□ -1.6
CHD7-205ENST00000527825 SCTRP47872 440 aa5.06□□□□□ -1.6
CHD7-205ENST00000527825 CHRNDQ07001 517 aa5.06□□□□□ -1.6
CHD7-205ENST00000527825 ADGRE1Q14246 886 aa5.06□□□□□ -1.6
CHD7-205ENST00000527825 TSGA10IPQ3SY00 556 aa5.06□□□□□ -1.6
CHD7-205ENST00000527825 NOL9Q5SY16 702 aaKnown RBP5.06□□□□□ -1.6
CHD7-205ENST00000527825 GJC2Q5T442 439 aaPredicted RBP5.06□□□□□ -1.6
CHD7-205ENST00000527825 MAP3K21Q5TCX8 1036 aa5.06□□□□□ -1.6
CHD7-205ENST00000527825 HDGFL1Q5TGJ6 251 aa5.06□□□□□ -1.6
CHD7-205ENST00000527825 MFSD14CQ5VZR4 134 aa5.06□□□□□ -1.6
CHD7-205ENST00000527825 RNF135Q8IUD6 432 aa5.06□□□□□ -1.6
CHD7-205ENST00000527825 VWA5B2Q8N398 1253 aa5.06□□□□□ -1.6
CHD7-205ENST00000527825 ARRDC4Q8NCT1 418 aa5.06□□□□□ -1.6
CHD7-205ENST00000527825 CCDC191Q8NCU4 936 aa5.06□□□□□ -1.6
CHD7-205ENST00000527825 LPAR1Q92633 364 aa5.06□□□□□ -1.6
CHD7-205ENST00000527825 TEKT1Q969V4 418 aa5.06□□□□□ -1.6
CHD7-205ENST00000527825 PBX4Q9BYU1 374 aa5.06□□□□□ -1.6
CHD7-205ENST00000527825 GREM2Q9H772 168 aa5.06□□□□□ -1.6
CHD7-205ENST00000527825 HYPKQ9NX55 129 aa5.06□□□□□ -1.6
CHD7-205ENST00000527825 DDX20Q9UHI6 824 aaKnown RBP5.06□□□□□ -1.6
CHD7-205ENST00000527825 AGTPBP1Q9UPW5 1226 aa5.06□□□□□ -1.6
CHD7-205ENST00000527825 TACC3Q9Y6A5 838 aa5.06□□□□□ -1.6
CHD7-205ENST00000527825 TRIM43BA6NCK2 446 aa5.05□□□□□ -1.6
CHD7-205ENST00000527825 TRIM75PA6NK02 468 aa5.05□□□□□ -1.6
CHD7-205ENST00000527825 FRAT2O75474 233 aaPredicted RBP5.05□□□□□ -1.6
CHD7-205ENST00000527825 TAF5LO75529 589 aa5.05□□□□□ -1.6
CHD7-205ENST00000527825 CLTBP09497 229 aa5.05□□□□□ -1.6
CHD7-205ENST00000527825 XRCC5P13010 732 aaKnown RBP5.05□□□□□ -1.6
CHD7-205ENST00000527825 RRP1P56182 461 aaKnown RBP5.05□□□□□ -1.6
CHD7-205ENST00000527825 FKBP1CQ5VVH2 108 aa5.05□□□□□ -1.6
CHD7-205ENST00000527825 ERMP1Q7Z2K6 904 aa5.05□□□□□ -1.6
CHD7-205ENST00000527825 SCYL3Q8IZE3 742 aa5.05□□□□□ -1.6
CHD7-205ENST00000527825 TTLL11Q8NHH1 800 aa5.05□□□□□ -1.6
CHD7-205ENST00000527825 TRIM43Q96BQ3 446 aaPredicted RBP5.05□□□□□ -1.6
CHD7-205ENST00000527825 MTIF3Q9H2K0 278 aaKnown RBP5.05□□□□□ -1.6
CHD7-205ENST00000527825 NKX2-4Q9H2Z4 354 aa5.05□□□□□ -1.6
CHD7-205ENST00000527825 ZNF112Q9UJU3 913 aa5.05□□□□□ -1.6
CHD7-205ENST00000527825 GJD2Q9UKL4 321 aa5.05□□□□□ -1.6
CHD7-205ENST00000527825 BRPF3Q9ULD4 1205 aa5.05□□□□□ -1.6
CHD7-205ENST00000527825 DOLKQ9UPQ8 538 aa5.05□□□□□ -1.6
CHD7-205ENST00000527825 LRRFIP2Q9Y608 721 aaKnown RBP5.05□□□□□ -1.6
CHD7-205ENST00000527825 DNAH12Q6ZR08 3092 aa5.05□□□□□ -1.6
CHD7-205ENST00000527825 CDH23Q9H251 3354 aa5.04□□□□□ -1.6
CHD7-205ENST00000527825 MAST3O60307 1309 aa5.04□□□□□ -1.6
CHD7-205ENST00000527825 MYH2Q9UKX2 1941 aa5.04□□□□□ -1.6
CHD7-205ENST00000527825 GRXCR1A8MXD5 290 aa5.04□□□□□ -1.6
CHD7-205ENST00000527825 PLIN1O60240 522 aa5.04□□□□□ -1.6
CHD7-205ENST00000527825 MAPK4P31152 587 aa5.04□□□□□ -1.6
CHD7-205ENST00000527825 EPHB4P54760 987 aa5.04□□□□□ -1.6
CHD7-205ENST00000527825 IRX3P78415 501 aaPredicted RBP5.04□□□□□ -1.6
CHD7-205ENST00000527825 ATP2B2Q01814 1243 aa5.04□□□□□ -1.6
CHD7-205ENST00000527825 TCP10Q12799 353 aa5.04□□□□□ -1.6
CHD7-205ENST00000527825 USP4Q13107 963 aa5.04□□□□□ -1.6
CHD7-205ENST00000527825 PPIGQ13427 754 aaKnown RBP eCLIP5.04□□□□□ -1.6
CHD7-205ENST00000527825 NFE2L2Q16236 605 aa5.04□□□□□ -1.6
CHD7-205ENST00000527825 CCL14Q16627 93 aa5.04□□□□□ -1.6
CHD7-205ENST00000527825 C15orf52Q6ZUT6 534 aaKnown RBP5.04□□□□□ -1.6
CHD7-205ENST00000527825 SV2AQ7L0J3 742 aa5.04□□□□□ -1.6
CHD7-205ENST00000527825 LYSMD3Q7Z3D4 306 aa5.04□□□□□ -1.6
CHD7-205ENST00000527825 TDRD7Q8NHU6 1098 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms