RNA–Protein interactions for RNA: ENST00000527547.5

CDC27-204, Transcript of cell division cycle 27, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC27, Length 2,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-204ENST00000527547 GMCL1Q96IK5 515 aa10.59□□□□□ -0.71
CDC27-204ENST00000527547 VCPKMTQ9H867 229 aa10.59□□□□□ -0.71
CDC27-204ENST00000527547 SCN4AP35499 1836 aa10.58□□□□□ -0.72
CDC27-204ENST00000527547 TRIM75PA6NK02 468 aa10.58□□□□□ -0.72
CDC27-204ENST00000527547 TRAF5O00463 557 aa10.58□□□□□ -0.72
CDC27-204ENST00000527547 TRAK2O60296 914 aa10.58□□□□□ -0.72
CDC27-204ENST00000527547 XBP1P17861 261 aa10.58□□□□□ -0.72
CDC27-204ENST00000527547 PTPRAP18433 802 aa10.58□□□□□ -0.72
CDC27-204ENST00000527547 U2AF2P26368 475 aaKnown RBP eCLIP10.58□□□□□ -0.724e-9■■■■■ 27.7
CDC27-204ENST00000527547 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.58□□□□□ -0.72
CDC27-204ENST00000527547 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.58□□□□□ -0.72
CDC27-204ENST00000527547 GOPCQ9HD26 462 aa10.58□□□□□ -0.72
CDC27-204ENST00000527547 FBXO28Q9NVF7 368 aa10.58□□□□□ -0.72
CDC27-204ENST00000527547 BARHL2Q9NY43 387 aa10.58□□□□□ -0.72
CDC27-204ENST00000527547 SEC63Q9UGP8 760 aaKnown RBP10.58□□□□□ -0.72
CDC27-204ENST00000527547 CLIC4Q9Y696 253 aa10.58□□□□□ -0.72
CDC27-204ENST00000527547 ZHX2Q9Y6X8 837 aa10.58□□□□□ -0.72
CDC27-204ENST00000527547 WDR90Q96KV7 1748 aa10.58□□□□□ -0.72
CDC27-204ENST00000527547 ATP2B1P20020 1258 aa10.58□□□□□ -0.72
CDC27-204ENST00000527547 SAFBQ15424 915 aaKnown RBP eCLIP10.58□□□□□ -0.72
CDC27-204ENST00000527547 NOSTRINQ8IVI9 506 aa10.58□□□□□ -0.72
CDC27-204ENST00000527547 ZC3H15Q8WU90 426 aaKnown RBP10.58□□□□□ -0.72
CDC27-204ENST00000527547 HOOK2Q96ED9 719 aa10.58□□□□□ -0.72
CDC27-204ENST00000527547 NMRK2Q9NPI5 230 aa10.58□□□□□ -0.72
CDC27-204ENST00000527547 DOCK1Q14185 1865 aa10.57□□□□□ -0.72
CDC27-204ENST00000527547 SMARCA1P28370 1054 aa10.57□□□□□ -0.72
CDC27-204ENST00000527547 KRT2P35908 639 aa10.57□□□□□ -0.72
CDC27-204ENST00000527547 NAPAP54920 295 aa10.57□□□□□ -0.72
CDC27-204ENST00000527547 VGLL4Q14135 290 aa10.57□□□□□ -0.72
CDC27-204ENST00000527547 GPT2Q8TD30 523 aa10.57□□□□□ -0.72
CDC27-204ENST00000527547 LEO1Q8WVC0 666 aaPredicted RBP10.57□□□□□ -0.72
CDC27-204ENST00000527547 SPATA32Q96LK8 384 aa10.57□□□□□ -0.72
CDC27-204ENST00000527547 ZNF408Q9H9D4 720 aa10.57□□□□□ -0.72
CDC27-204ENST00000527547 PICK1Q9NRD5 415 aa10.57□□□□□ -0.72
CDC27-204ENST00000527547 RBM27Q9P2N5 1060 aaKnown RBP10.57□□□□□ -0.72
CDC27-204ENST00000527547 MYH15Q9Y2K3 1946 aa10.57□□□□□ -0.72
CDC27-204ENST00000527547 WNT7AO00755 349 aa10.57□□□□□ -0.72
CDC27-204ENST00000527547 TTLL12Q14166 644 aaPredicted RBP10.57□□□□□ -0.72
CDC27-204ENST00000527547 CDC37Q16543 378 aaPredicted RBP10.57□□□□□ -0.72
CDC27-204ENST00000527547 QRICH1Q2TAL8 776 aa10.57□□□□□ -0.72
CDC27-204ENST00000527547 BRAPQ7Z569 592 aa10.57□□□□□ -0.72
CDC27-204ENST00000527547 PNMA8AQ86V59 439 aaPredicted RBP10.57□□□□□ -0.72
CDC27-204ENST00000527547 KIFC2Q96AC6 838 aa10.57□□□□□ -0.72
CDC27-204ENST00000527547 CLMNQ96JQ2 1002 aa10.57□□□□□ -0.72
CDC27-204ENST00000527547 ANP32EQ9BTT0 268 aa10.57□□□□□ -0.72
CDC27-204ENST00000527547 GZF1Q9H116 711 aaPredicted RBP10.57□□□□□ -0.72
CDC27-204ENST00000527547 EMILIN3Q9NT22 766 aa10.57□□□□□ -0.72
CDC27-204ENST00000527547 SNCAIPQ9Y6H5 919 aa10.57□□□□□ -0.72
CDC27-204ENST00000527547 PNMA6FA0A0J9YX94 578 aa10.56□□□□□ -0.72
CDC27-204ENST00000527547 ZBTB5O15062 677 aa10.56□□□□□ -0.72
CDC27-204ENST00000527547 TOB1P50616 345 aaPredicted RBP10.56□□□□□ -0.72
CDC27-204ENST00000527547 SYDE2Q5VT97 1194 aa10.56□□□□□ -0.72
CDC27-204ENST00000527547 MTMR8Q96EF0 704 aa10.56□□□□□ -0.72
CDC27-204ENST00000527547 FOXP1Q9H334 677 aaPredicted RBP10.56□□□□□ -0.72
CDC27-204ENST00000527547 SH2D4AQ9H788 454 aa10.56□□□□□ -0.72
CDC27-204ENST00000527547 PRR12Q9ULL5 1215 aa10.56□□□□□ -0.72
CDC27-204ENST00000527547 DDX49Q9Y6V7 483 aaKnown RBP10.56□□□□□ -0.72
CDC27-204ENST00000527547 SMCO2A6NFE2 343 aa10.56□□□□□ -0.72
CDC27-204ENST00000527547 PPP1R12BO60237 982 aaPredicted RBP10.56□□□□□ -0.72
CDC27-204ENST00000527547 STAT2P52630 851 aa10.56□□□□□ -0.72
CDC27-204ENST00000527547 HMGCS2P54868 508 aa10.56□□□□□ -0.72
CDC27-204ENST00000527547 MAP3K9P80192 1104 aa10.56□□□□□ -0.72
CDC27-204ENST00000527547 USH1GQ495M9 461 aa10.56□□□□□ -0.72
CDC27-204ENST00000527547 PIK3AP1Q6ZUJ8 805 aa10.56□□□□□ -0.72
CDC27-204ENST00000527547 BLIDQ8IZY5 108 aa10.56□□□□□ -0.72
CDC27-204ENST00000527547 TNFRSF25Q93038 417 aa10.56□□□□□ -0.72
CDC27-204ENST00000527547 KIAA1683Q9H0B3 1180 aa10.56□□□□□ -0.72
CDC27-204ENST00000527547 SF3A1Q15459 793 aaKnown RBP10.55□□□□□ -0.72
CDC27-204ENST00000527547 TMEM87AQ8NBN3 555 aa10.55□□□□□ -0.72
CDC27-204ENST00000527547 ZNF280CQ8ND82 737 aa10.55□□□□□ -0.72
CDC27-204ENST00000527547 PGBD1Q96JS3 809 aa10.55□□□□□ -0.72
CDC27-204ENST00000527547 ZNF396Q96N95 335 aaPredicted RBP10.55□□□□□ -0.72
CDC27-204ENST00000527547 ELP3Q9H9T3 547 aa10.55□□□□□ -0.72
CDC27-204ENST00000527547 SH3GLB2Q9NR46 395 aa10.55□□□□□ -0.72
CDC27-204ENST00000527547 CFAP45Q9UL16 551 aa10.55□□□□□ -0.72
CDC27-204ENST00000527547 SYNPO2Q9UMS6 1093 aa10.55□□□□□ -0.72
CDC27-204ENST00000527547 PCDHA4Q9UN74 947 aa10.55□□□□□ -0.72
CDC27-204ENST00000527547 OTOFQ9HC10 1997 aa10.55□□□□□ -0.72
CDC27-204ENST00000527547 VCAM1P19320 739 aa10.55□□□□□ -0.72
CDC27-204ENST00000527547 BACE1P56817 501 aa10.55□□□□□ -0.72
CDC27-204ENST00000527547 CCDC174Q6PII3 467 aa10.55□□□□□ -0.72
CDC27-204ENST00000527547 BTNL9Q6UXG8 535 aa10.55□□□□□ -0.72
CDC27-204ENST00000527547 RGS22Q8NE09 1264 aa10.55□□□□□ -0.72
CDC27-204ENST00000527547 SCAND2PQ9GZW5 306 aaPredicted RBP10.55□□□□□ -0.72
CDC27-204ENST00000527547 BRMS1Q9HCU9 246 aa10.55□□□□□ -0.72
CDC27-204ENST00000527547 TMEM260Q9NX78 707 aa10.55□□□□□ -0.72
CDC27-204ENST00000527547 PCDHB6Q9Y5E3 794 aa10.55□□□□□ -0.72
CDC27-204ENST00000527547 MRVI1Q9Y6F6 885 aa10.55□□□□□ -0.72
CDC27-204ENST00000527547 M0R2N6 131 aa10.54□□□□□ -0.72
CDC27-204ENST00000527547 MARCKSP29966 332 aaPredicted RBP10.54□□□□□ -0.72
CDC27-204ENST00000527547 UBE2SQ16763 222 aa10.54□□□□□ -0.72
CDC27-204ENST00000527547 ANO1Q5XXA6 986 aa10.54□□□□□ -0.72
CDC27-204ENST00000527547 WDR18Q9BV38 432 aa10.54□□□□□ -0.72
CDC27-204ENST00000527547 TANGO6Q9C0B7 1094 aa10.54□□□□□ -0.72
CDC27-204ENST00000527547 ZMYND12Q9H0C1 365 aa10.54□□□□□ -0.72
CDC27-204ENST00000527547 GINM1Q9NU53 330 aa10.54□□□□□ -0.72
CDC27-204ENST00000527547 RTEL1Q9NZ71 1219 aa10.54□□□□□ -0.72
CDC27-204ENST00000527547 BIN2Q9UBW5 565 aaPredicted RBP10.54□□□□□ -0.72
CDC27-204ENST00000527547 PCDHA6Q9UN73 950 aa10.54□□□□□ -0.72
CDC27-204ENST00000527547 PCDHA8Q9Y5H6 950 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms