RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 IRS2Q9Y4H2 1338 aa5.06□□□□□ -1.6
CLNS1A-209ENST00000527299 A0A0U1RQG5 324 aaPredicted RBP5.06□□□□□ -1.6
CLNS1A-209ENST00000527299 FAM221AA4D161 298 aa5.06□□□□□ -1.6
CLNS1A-209ENST00000527299 FADS2P1A8MWK0 482 aa5.06□□□□□ -1.6
CLNS1A-209ENST00000527299 SLURP1P55000 103 aa5.06□□□□□ -1.6
CLNS1A-209ENST00000527299 CBX2Q14781 532 aaPredicted RBP5.06□□□□□ -1.6
CLNS1A-209ENST00000527299 KIR3DS1Q14943 382 aa5.06□□□□□ -1.6
CLNS1A-209ENST00000527299 BBS9Q3SYG4 887 aa5.06□□□□□ -1.6
CLNS1A-209ENST00000527299 GALNT18Q6P9A2 607 aa5.06□□□□□ -1.6
CLNS1A-209ENST00000527299 ZPBP2Q6X784 338 aa5.06□□□□□ -1.6
CLNS1A-209ENST00000527299 NPM2Q86SE8 214 aaKnown RBP5.06□□□□□ -1.6
CLNS1A-209ENST00000527299 PHC3Q8NDX5 983 aa5.06□□□□□ -1.6
CLNS1A-209ENST00000527299 GPR20Q99678 358 aa5.06□□□□□ -1.6
CLNS1A-209ENST00000527299 TNFRSF10DQ9UBN6 386 aa5.06□□□□□ -1.6
CLNS1A-209ENST00000527299 AK5Q9Y6K8 562 aa5.06□□□□□ -1.6
CLNS1A-209ENST00000527299 WTIPA6NIX2 430 aaPredicted RBP5.05□□□□□ -1.6
CLNS1A-209ENST00000527299 IGFBP6P24592 240 aaPredicted RBP5.05□□□□□ -1.6
CLNS1A-209ENST00000527299 ARL4AP40617 200 aa5.05□□□□□ -1.6
CLNS1A-209ENST00000527299 LAPTM5Q13571 262 aa5.05□□□□□ -1.6
CLNS1A-209ENST00000527299 RAB3GAP1Q15042 981 aa5.05□□□□□ -1.6
CLNS1A-209ENST00000527299 HSF5Q4G112 596 aaPredicted RBP5.05□□□□□ -1.6
CLNS1A-209ENST00000527299 BNC2Q6ZN30 1099 aaPredicted RBP5.05□□□□□ -1.6
CLNS1A-209ENST00000527299 FCRL2Q96LA5 508 aaPredicted RBP5.05□□□□□ -1.6
CLNS1A-209ENST00000527299 KIF2CQ99661 725 aa5.05□□□□□ -1.6
CLNS1A-209ENST00000527299 KLHL3Q9UH77 587 aa5.05□□□□□ -1.6
CLNS1A-209ENST00000527299 SSU72P8A0A1W2PR75 194 aa5.04□□□□□ -1.6
CLNS1A-209ENST00000527299 K7ESM1 405 aa5.04□□□□□ -1.6
CLNS1A-209ENST00000527299 AKAP8O43823 692 aaKnown RBP5.04□□□□□ -1.6
CLNS1A-209ENST00000527299 DNAJA2O60884 412 aa5.04□□□□□ -1.6
CLNS1A-209ENST00000527299 BPNT1O95861 308 aa5.04□□□□□ -1.6
CLNS1A-209ENST00000527299 NCKAP1LP55160 1127 aa5.04□□□□□ -1.6
CLNS1A-209ENST00000527299 MEI1Q5TIA1 1274 aa5.04□□□□□ -1.6
CLNS1A-209ENST00000527299 TMC3Q7Z5M5 1100 aa5.04□□□□□ -1.6
CLNS1A-209ENST00000527299 PHACTR4Q8IZ21 702 aa5.04□□□□□ -1.6
CLNS1A-209ENST00000527299 NLGN1Q8N2Q7 840 aa5.04□□□□□ -1.6
CLNS1A-209ENST00000527299 GATAD2BQ8WXI9 593 aa5.04□□□□□ -1.6
CLNS1A-209ENST00000527299 NOC4LQ9BVI4 516 aaKnown RBP5.04□□□□□ -1.6
CLNS1A-209ENST00000527299 CHMP4AQ9BY43 222 aa5.04□□□□□ -1.6
CLNS1A-209ENST00000527299 TNFRSF12AQ9NP84 129 aa5.04□□□□□ -1.6
CLNS1A-209ENST00000527299 PALD1Q9ULE6 856 aa5.04□□□□□ -1.6
CLNS1A-209ENST00000527299 NISCHQ9Y2I1 1504 aa5.03□□□□□ -1.6
CLNS1A-209ENST00000527299 NUDT19A8MXV4 375 aa5.03□□□□□ -1.6
CLNS1A-209ENST00000527299 RGS13O14921 159 aa5.03□□□□□ -1.6
CLNS1A-209ENST00000527299 FKTNO75072 461 aa5.03□□□□□ -1.6
CLNS1A-209ENST00000527299 HTR3BO95264 441 aa5.03□□□□□ -1.6
CLNS1A-209ENST00000527299 SYPP08247 313 aa5.03□□□□□ -1.6
CLNS1A-209ENST00000527299 TNFRSF1AP19438 455 aa5.03□□□□□ -1.6
CLNS1A-209ENST00000527299 GBP1P32455 592 aa5.03□□□□□ -1.6
CLNS1A-209ENST00000527299 LMNB2Q03252 620 aa5.03□□□□□ -1.6
CLNS1A-209ENST00000527299 NBPF9Q3BBW0 867 aa5.03□□□□□ -1.6
CLNS1A-209ENST00000527299 VWA3BQ502W6 1294 aa5.03□□□□□ -1.6
CLNS1A-209ENST00000527299 UBXN11Q5T124 520 aa5.03□□□□□ -1.6
CLNS1A-209ENST00000527299 SLCO6A1Q86UG4 719 aa5.03□□□□□ -1.6
CLNS1A-209ENST00000527299 ACSL6Q9UKU0 697 aa5.03□□□□□ -1.6
CLNS1A-209ENST00000527299 GPR55Q9Y2T6 319 aaPredicted RBP5.03□□□□□ -1.6
CLNS1A-209ENST00000527299 POLR3KQ9Y2Y1 108 aaPredicted RBP5.03□□□□□ -1.6
CLNS1A-209ENST00000527299 TAF6LQ9Y6J9 622 aa5.03□□□□□ -1.6
CLNS1A-209ENST00000527299 SUV39H1O43463 412 aa5.02□□□□□ -1.61
CLNS1A-209ENST00000527299 UBOX5O94941 541 aa5.02□□□□□ -1.61
CLNS1A-209ENST00000527299 F13A1P00488 732 aa5.02□□□□□ -1.61
CLNS1A-209ENST00000527299 PRKCAP17252 672 aa5.02□□□□□ -1.61
CLNS1A-209ENST00000527299 MAGEA10P43363 369 aaPredicted RBP5.02□□□□□ -1.61
CLNS1A-209ENST00000527299 CEBPAP49715 358 aaPredicted RBP5.02□□□□□ -1.61
CLNS1A-209ENST00000527299 RNF4P78317 190 aa5.02□□□□□ -1.61
CLNS1A-209ENST00000527299 CYP4F8P98187 520 aa5.02□□□□□ -1.61
CLNS1A-209ENST00000527299 SNW1Q13573 536 aaKnown RBP5.02□□□□□ -1.61
CLNS1A-209ENST00000527299 ZNF827Q17R98 1081 aa5.02□□□□□ -1.61
CLNS1A-209ENST00000527299 RPTNQ6XPR3 784 aa5.02□□□□□ -1.61
CLNS1A-209ENST00000527299 CDK11AQ9UQ88 783 aaPredicted RBP5.02□□□□□ -1.61
CLNS1A-209ENST00000527299 GRIN3BO60391 1043 aa5.01□□□□□ -1.61
CLNS1A-209ENST00000527299 PRPF40AO75400 957 aaKnown RBP5.01□□□□□ -1.61
CLNS1A-209ENST00000527299 PRAMEF1O95521 474 aa5.01□□□□□ -1.61
CLNS1A-209ENST00000527299 BRD1O95696 1058 aa5.01□□□□□ -1.61
CLNS1A-209ENST00000527299 PFKLP17858 780 aa5.01□□□□□ -1.61
CLNS1A-209ENST00000527299 LIMS1P48059 325 aa5.01□□□□□ -1.61
CLNS1A-209ENST00000527299 MAPKAPK2P49137 400 aa5.01□□□□□ -1.61
CLNS1A-209ENST00000527299 ST13P50502 369 aaKnown RBP5.01□□□□□ -1.61
CLNS1A-209ENST00000527299 CHMP4BP1P59074 171 aa5.01□□□□□ -1.61
CLNS1A-209ENST00000527299 ZXDAP98168 799 aa5.01□□□□□ -1.61
CLNS1A-209ENST00000527299 CAMK2GQ13555 558 aaPredicted RBP5.01□□□□□ -1.61
CLNS1A-209ENST00000527299 NBPF12Q5TAG4 269 aaPredicted RBP5.01□□□□□ -1.61
CLNS1A-209ENST00000527299 CRELD1Q96HD1 420 aa5.01□□□□□ -1.61
CLNS1A-209ENST00000527299 RNF19AQ9NV58 838 aa5.01□□□□□ -1.61
CLNS1A-209ENST00000527299 ERVK13-1Q9NX77 482 aa5.01□□□□□ -1.61
CLNS1A-209ENST00000527299 A0A1W2PQ45 241 aaPredicted RBP5□□□□□ -1.61
CLNS1A-209ENST00000527299 A0A1W2PQY0 241 aa5□□□□□ -1.61
CLNS1A-209ENST00000527299 ENDOUP21128 410 aaKnown RBP5□□□□□ -1.61
CLNS1A-209ENST00000527299 ADAM17P78536 824 aa5□□□□□ -1.61
CLNS1A-209ENST00000527299 TAF1CQ15572 869 aaPredicted RBP5□□□□□ -1.61
CLNS1A-209ENST00000527299 PLEKHN1Q494U1 663 aaPredicted RBP5□□□□□ -1.61
CLNS1A-209ENST00000527299 NT5DC1Q5TFE4 455 aa5□□□□□ -1.61
CLNS1A-209ENST00000527299 LIPIQ6XZB0 460 aa5□□□□□ -1.61
CLNS1A-209ENST00000527299 FERMT3Q86UX7 667 aa5□□□□□ -1.61
CLNS1A-209ENST00000527299 NUP43Q8NFH3 380 aa5□□□□□ -1.61
CLNS1A-209ENST00000527299 YTHDC1Q96MU7 727 aaKnown RBP5□□□□□ -1.61
CLNS1A-209ENST00000527299 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5□□□□□ -1.61
CLNS1A-209ENST00000527299 MATN3O15232 486 aa4.99□□□□□ -1.61
CLNS1A-209ENST00000527299 SIGLEC6O43699 453 aa4.99□□□□□ -1.61
CLNS1A-209ENST00000527299 PF4P02776 101 aa4.99□□□□□ -1.61
CLNS1A-209ENST00000527299 MSL3P1P0C860 447 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms