RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 MKL1Q969V6 931 aa18.52■□□□□ 0.56
SNRNP35-204ENST00000527158 PIGSQ96S52 555 aa18.52■□□□□ 0.56
SNRNP35-204ENST00000527158 SGIP1Q9BQI5 828 aa18.52■□□□□ 0.56
SNRNP35-204ENST00000527158 GPCPD1Q9NPB8 672 aa18.52■□□□□ 0.56
SNRNP35-204ENST00000527158 KCNH3Q9ULD8 1083 aa18.52■□□□□ 0.56
SNRNP35-204ENST00000527158 CCDC194A0A1B0GVG4 234 aa18.51■□□□□ 0.55
SNRNP35-204ENST00000527158 hCG_1984214I3L0E3 225 aa18.51■□□□□ 0.55
SNRNP35-204ENST00000527158 EEF2P13639 858 aaKnown RBP18.51■□□□□ 0.55
SNRNP35-204ENST00000527158 GNA11P29992 359 aa18.51■□□□□ 0.55
SNRNP35-204ENST00000527158 ZRSR1Q15695 479 aaKnown RBP18.51■□□□□ 0.55
SNRNP35-204ENST00000527158 ZNF174Q15697 407 aa18.51■□□□□ 0.55
SNRNP35-204ENST00000527158 SPDYE2Q495Y8 402 aa18.51■□□□□ 0.55
SNRNP35-204ENST00000527158 NOM1Q5C9Z4 860 aaKnown RBP18.51■□□□□ 0.55
SNRNP35-204ENST00000527158 RBM26Q5T8P6 1007 aaKnown RBP18.51■□□□□ 0.55
SNRNP35-204ENST00000527158 MTERF4Q7Z6M4 381 aaKnown RBP18.51■□□□□ 0.55
SNRNP35-204ENST00000527158 ZNF713Q8N859 430 aaPredicted RBP18.51■□□□□ 0.55
SNRNP35-204ENST00000527158 ZMYND12Q9H0C1 365 aa18.51■□□□□ 0.55
SNRNP35-204ENST00000527158 C6orf50Q9HD87 102 aa18.51■□□□□ 0.55
SNRNP35-204ENST00000527158 STX1AQ16623 288 aa18.51■□□□□ 0.55
SNRNP35-204ENST00000527158 CCDC96Q2M329 555 aa18.51■□□□□ 0.55
SNRNP35-204ENST00000527158 FKBP1CQ5VVH2 108 aa18.51■□□□□ 0.55
SNRNP35-204ENST00000527158 FERMT2Q96AC1 680 aa18.51■□□□□ 0.55
SNRNP35-204ENST00000527158 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.51■□□□□ 0.55
SNRNP35-204ENST00000527158 R3HCC1Q9Y3T6 440 aaKnown RBP18.51■□□□□ 0.55
SNRNP35-204ENST00000527158 NFKBIEO00221 500 aa18.5■□□□□ 0.55
SNRNP35-204ENST00000527158 MMP14P50281 582 aa18.5■□□□□ 0.55
SNRNP35-204ENST00000527158 ICA1Q05084 483 aa18.5■□□□□ 0.55
SNRNP35-204ENST00000527158 VEZTQ9HBM0 779 aa18.5■□□□□ 0.55
SNRNP35-204ENST00000527158 KIAA1468Q9P260 1216 aa18.5■□□□□ 0.55
SNRNP35-204ENST00000527158 PCDHA6Q9UN73 950 aa18.5■□□□□ 0.55
SNRNP35-204ENST00000527158 PCDHA8Q9Y5H6 950 aa18.5■□□□□ 0.55
SNRNP35-204ENST00000527158 SIPA1L1O43166 1804 aa18.49■□□□□ 0.55
SNRNP35-204ENST00000527158 SMCO2A6NFE2 343 aa18.49■□□□□ 0.55
SNRNP35-204ENST00000527158 M0R2N6 131 aa18.49■□□□□ 0.55
SNRNP35-204ENST00000527158 SEPT2Q15019 361 aa18.49■□□□□ 0.55
SNRNP35-204ENST00000527158 ANO10Q9NW15 660 aa18.49■□□□□ 0.55
SNRNP35-204ENST00000527158 GREB1LQ9C091 1923 aaPredicted RBP18.49■□□□□ 0.55
SNRNP35-204ENST00000527158 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.49■□□□□ 0.55
SNRNP35-204ENST00000527158 DYNC1I1O14576 645 aa18.49■□□□□ 0.55
SNRNP35-204ENST00000527158 GDF11O95390 407 aa18.49■□□□□ 0.55
SNRNP35-204ENST00000527158 ZNF165P49910 485 aa18.49■□□□□ 0.55
SNRNP35-204ENST00000527158 SPECC1Q5M775 1068 aa18.49■□□□□ 0.55
SNRNP35-204ENST00000527158 UPF1Q92900 1129 aaKnown RBP eCLIP18.49■□□□□ 0.55
SNRNP35-204ENST00000527158 DNAJC25Q9H1X3 360 aa18.49■□□□□ 0.55
SNRNP35-204ENST00000527158 PSDA5PKW4 1024 aaPredicted RBP18.48■□□□□ 0.55
SNRNP35-204ENST00000527158 ADAMTS3O15072 1205 aa18.48■□□□□ 0.55
SNRNP35-204ENST00000527158 RAD21O60216 631 aa18.48■□□□□ 0.55
SNRNP35-204ENST00000527158 GRIN1Q05586 938 aa18.48■□□□□ 0.55
SNRNP35-204ENST00000527158 PTGDRQ13258 359 aa18.48■□□□□ 0.55
SNRNP35-204ENST00000527158 DCAF4Q8WV16 495 aa18.48■□□□□ 0.55
SNRNP35-204ENST00000527158 CSRNP2Q9H175 543 aa18.48■□□□□ 0.55
SNRNP35-204ENST00000527158 HOOK1Q9UJC3 728 aaKnown RBP18.48■□□□□ 0.55
SNRNP35-204ENST00000527158 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.48■□□□□ 0.55
SNRNP35-204ENST00000527158 ADCY5O95622 1261 aa18.48■□□□□ 0.55
SNRNP35-204ENST00000527158 SLC1A4P43007 532 aa18.48■□□□□ 0.55
SNRNP35-204ENST00000527158 ATP2C1P98194 919 aaPredicted RBP18.48■□□□□ 0.55
SNRNP35-204ENST00000527158 SLFN13Q68D06 897 aa18.48■□□□□ 0.55
SNRNP35-204ENST00000527158 FAM83AQ86UY5 434 aa18.48■□□□□ 0.55
SNRNP35-204ENST00000527158 ADGRF4Q8IZF3 695 aa18.48■□□□□ 0.55
SNRNP35-204ENST00000527158 CNNM3Q8NE01 707 aa18.48■□□□□ 0.55
SNRNP35-204ENST00000527158 RASGRP4Q8TDF6 673 aa18.48■□□□□ 0.55
SNRNP35-204ENST00000527158 CBX8Q9HC52 389 aa18.48■□□□□ 0.55
SNRNP35-204ENST00000527158 USP25Q9UHP3 1055 aa18.48■□□□□ 0.55
SNRNP35-204ENST00000527158 LTBP3Q9NS15 1303 aa18.47■□□□□ 0.55
SNRNP35-204ENST00000527158 FER1L6Q2WGJ9 1857 aa18.47■□□□□ 0.55
SNRNP35-204ENST00000527158 PNMA6FA0A0J9YX94 578 aa18.47■□□□□ 0.55
SNRNP35-204ENST00000527158 ESYT2A0FGR8 921 aa18.47■□□□□ 0.55
SNRNP35-204ENST00000527158 WNT7AO00755 349 aa18.47■□□□□ 0.55
SNRNP35-204ENST00000527158 GH2P01242 217 aa18.47■□□□□ 0.55
SNRNP35-204ENST00000527158 RPS12P25398 132 aaKnown RBP18.47■□□□□ 0.55
SNRNP35-204ENST00000527158 MCM7P33993 719 aa18.47■□□□□ 0.55
SNRNP35-204ENST00000527158 PTGER2P43116 358 aa18.47■□□□□ 0.55
SNRNP35-204ENST00000527158 SHROOM1Q2M3G4 852 aaPredicted RBP18.47■□□□□ 0.55
SNRNP35-204ENST00000527158 KCTD1Q719H9 257 aa18.47■□□□□ 0.55
SNRNP35-204ENST00000527158 KRT25Q7Z3Z0 450 aa18.47■□□□□ 0.55
SNRNP35-204ENST00000527158 JMJD4Q9H9V9 463 aa18.47■□□□□ 0.55
SNRNP35-204ENST00000527158 MYOZ2Q9NPC6 264 aa18.47■□□□□ 0.55
SNRNP35-204ENST00000527158 GOLGA6L6A8MZA4 724 aa18.47■□□□□ 0.55
SNRNP35-204ENST00000527158 TTBK2Q6IQ55 1244 aa18.47■□□□□ 0.55
SNRNP35-204ENST00000527158 KRBA2Q6ZNG9 492 aa18.47■□□□□ 0.55
SNRNP35-204ENST00000527158 LUZP1Q86V48 1076 aa18.47■□□□□ 0.55
SNRNP35-204ENST00000527158 ERCC4Q92889 916 aaPredicted RBP18.47■□□□□ 0.55
SNRNP35-204ENST00000527158 NAT10Q9H0A0 1025 aaKnown RBP18.47■□□□□ 0.55
SNRNP35-204ENST00000527158 BRCA1P38398 1863 aaKnown RBP18.46■□□□□ 0.55
SNRNP35-204ENST00000527158 CNTNAP1P78357 1384 aa18.46■□□□□ 0.55
SNRNP35-204ENST00000527158 LONRF3Q496Y0 759 aa18.46■□□□□ 0.55
SNRNP35-204ENST00000527158 SIAH1Q8IUQ4 282 aa18.46■□□□□ 0.55
SNRNP35-204ENST00000527158 ELOA2Q8IYF1 753 aaPredicted RBP18.46■□□□□ 0.55
SNRNP35-204ENST00000527158 ZBED3Q96IU2 234 aaPredicted RBP18.46■□□□□ 0.55
SNRNP35-204ENST00000527158 GOLGB1Q14789 3259 aaKnown RBP18.46■□□□□ 0.55
SNRNP35-204ENST00000527158 WNT10BO00744 389 aa18.45■□□□□ 0.54
SNRNP35-204ENST00000527158 PLCB2Q00722 1185 aa18.45■□□□□ 0.54
SNRNP35-204ENST00000527158 GMCL1P1Q8NEA9 526 aa18.45■□□□□ 0.54
SNRNP35-204ENST00000527158 PRIMPOLQ96LW4 560 aa18.45■□□□□ 0.54
SNRNP35-204ENST00000527158 POLR2DO15514 142 aaKnown RBP18.45■□□□□ 0.54
SNRNP35-204ENST00000527158 SLC16A2P36021 539 aa18.45■□□□□ 0.54
SNRNP35-204ENST00000527158 TNNI2P48788 182 aa18.45■□□□□ 0.54
SNRNP35-204ENST00000527158 NONOQ15233 471 aaKnown RBP eCLIP18.45■□□□□ 0.54
SNRNP35-204ENST00000527158 INF2Q27J81 1249 aa18.45■□□□□ 0.54
SNRNP35-204ENST00000527158 ARL6IP4Q66PJ3 421 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms