RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 GPATCH3Q96I76 525 aa14.03□□□□□ -0.16
CAPN1-204ENST00000526468 TEX13BQ9BXU2 312 aa14.03□□□□□ -0.16
CAPN1-204ENST00000526468 ZHX1Q9UKY1 873 aaPredicted RBP14.03□□□□□ -0.16
CAPN1-204ENST00000526468 ADAMTS5Q9UNA0 930 aa14.03□□□□□ -0.16
CAPN1-204ENST00000526468 SYNRGQ9UMZ2 1314 aa14.03□□□□□ -0.16
CAPN1-204ENST00000526468 SCN5AQ14524 2016 aa14.03□□□□□ -0.16
CAPN1-204ENST00000526468 VCANP13611 3396 aa14.03□□□□□ -0.16
CAPN1-204ENST00000526468 TRIM43BA6NCK2 446 aa14.02□□□□□ -0.17
CAPN1-204ENST00000526468 MINDY4BA8MYZ0 360 aa14.02□□□□□ -0.17
CAPN1-204ENST00000526468 POTEB2H3BUK9 544 aa14.02□□□□□ -0.17
CAPN1-204ENST00000526468 NDUFB10O96000 172 aa14.02□□□□□ -0.17
CAPN1-204ENST00000526468 TAL1P17542 331 aaPredicted RBP14.02□□□□□ -0.17
CAPN1-204ENST00000526468 RASA1P20936 1047 aa14.02□□□□□ -0.17
CAPN1-204ENST00000526468 ANP32AP39687 249 aaKnown RBP14.02□□□□□ -0.17
CAPN1-204ENST00000526468 SLC4A3P48751 1232 aa14.02□□□□□ -0.17
CAPN1-204ENST00000526468 TDO2P48775 406 aa14.02□□□□□ -0.17
CAPN1-204ENST00000526468 ZNF792Q3KQV3 632 aa14.02□□□□□ -0.17
CAPN1-204ENST00000526468 C1orf53Q5VUE5 145 aa14.02□□□□□ -0.17
CAPN1-204ENST00000526468 TSHZ3Q63HK5 1081 aa14.02□□□□□ -0.17
CAPN1-204ENST00000526468 TRIM43Q96BQ3 446 aaPredicted RBP14.02□□□□□ -0.17
CAPN1-204ENST00000526468 RNPC3Q96LT9 517 aaKnown RBP14.02□□□□□ -0.17
CAPN1-204ENST00000526468 MKNK2Q9HBH9 465 aa14.02□□□□□ -0.17
CAPN1-204ENST00000526468 ECHDC1Q9NTX5 307 aa14.02□□□□□ -0.17
CAPN1-204ENST00000526468 RCAN3Q9UKA8 241 aa14.02□□□□□ -0.17
CAPN1-204ENST00000526468 ISY1Q9ULR0 285 aaKnown RBP14.02□□□□□ -0.17
CAPN1-204ENST00000526468 CTDP1Q9Y5B0 961 aaPredicted RBP14.02□□□□□ -0.17
CAPN1-204ENST00000526468 LRRC47Q8N1G4 583 aaKnown RBP14.01□□□□□ -0.17
CAPN1-204ENST00000526468 APPBP2Q92624 585 aa14.01□□□□□ -0.17
CAPN1-204ENST00000526468 DDX11Q96FC9 970 aa14.01□□□□□ -0.17
CAPN1-204ENST00000526468 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.01□□□□□ -0.17
CAPN1-204ENST00000526468 EPB41L4AQ9HCS5 686 aaPredicted RBP14.01□□□□□ -0.17
CAPN1-204ENST00000526468 DIS3Q9Y2L1 958 aaKnown RBP14.01□□□□□ -0.17
CAPN1-204ENST00000526468 KIAA1217Q5T5P2 1943 aa14□□□□□ -0.17
CAPN1-204ENST00000526468 PLIN4Q96Q06 1357 aa14□□□□□ -0.17
CAPN1-204ENST00000526468 SYNGAP1Q96PV0 1343 aa14□□□□□ -0.17
CAPN1-204ENST00000526468 GPAA1O43292 621 aa14□□□□□ -0.17
CAPN1-204ENST00000526468 ADAMTS4O75173 837 aa14□□□□□ -0.17
CAPN1-204ENST00000526468 ZNF865P0CJ78 1059 aaPredicted RBP14□□□□□ -0.17
CAPN1-204ENST00000526468 RAG1P15918 1043 aa14□□□□□ -0.17
CAPN1-204ENST00000526468 CPXCR1Q8N123 301 aa14□□□□□ -0.17
CAPN1-204ENST00000526468 KBTBD3Q8NAB2 608 aa14□□□□□ -0.17
CAPN1-204ENST00000526468 MAFAQ8NHW3 353 aaPredicted RBP14□□□□□ -0.17
CAPN1-204ENST00000526468 KIFC2Q96AC6 838 aa14□□□□□ -0.17
CAPN1-204ENST00000526468 STRBPQ96SI9 672 aaKnown RBP14□□□□□ -0.17
CAPN1-204ENST00000526468 CDX2Q99626 313 aaPredicted RBP14□□□□□ -0.17
CAPN1-204ENST00000526468 STARD7Q9NQZ5 370 aa14□□□□□ -0.17
CAPN1-204ENST00000526468 TRIP12Q14669 1992 aaPredicted RBP14□□□□□ -0.17
CAPN1-204ENST00000526468 GSG1L2A8MUP6 293 aa13.99□□□□□ -0.17
CAPN1-204ENST00000526468 PRDM1O75626 825 aa13.99□□□□□ -0.17
CAPN1-204ENST00000526468 SMAD3P84022 425 aaKnown RBP13.99□□□□□ -0.17
CAPN1-204ENST00000526468 FPGSQ05932 587 aa13.99□□□□□ -0.17
CAPN1-204ENST00000526468 SBK1Q52WX2 424 aa13.99□□□□□ -0.17
CAPN1-204ENST00000526468 C20orf194Q5TEA3 1177 aa13.99□□□□□ -0.17
CAPN1-204ENST00000526468 COL25A1Q9BXS0 654 aaPredicted RBP13.99□□□□□ -0.17
CAPN1-204ENST00000526468 NYAP2Q9P242 653 aa13.99□□□□□ -0.17
CAPN1-204ENST00000526468 TACC3Q9Y6A5 838 aa13.99□□□□□ -0.17
CAPN1-204ENST00000526468 MYADML2A6NDP7 307 aa13.98□□□□□ -0.17
CAPN1-204ENST00000526468 F5H6K3 240 aa13.98□□□□□ -0.17
CAPN1-204ENST00000526468 M0R2C6 588 aa13.98□□□□□ -0.17
CAPN1-204ENST00000526468 KIAA0355O15063 1070 aa13.98□□□□□ -0.17
CAPN1-204ENST00000526468 ZBED4O75132 1171 aa13.98□□□□□ -0.17
CAPN1-204ENST00000526468 APPP05067 770 aa13.98□□□□□ -0.17
CAPN1-204ENST00000526468 FOSL2P15408 326 aa13.98□□□□□ -0.17
CAPN1-204ENST00000526468 ITGB8P26012 769 aa13.98□□□□□ -0.17
CAPN1-204ENST00000526468 ACLYP53396 1101 aa13.98□□□□□ -0.17
CAPN1-204ENST00000526468 KLRC3Q07444 240 aa13.98□□□□□ -0.17
CAPN1-204ENST00000526468 GIMAP6Q6P9H5 292 aa13.98□□□□□ -0.17
CAPN1-204ENST00000526468 MSL3Q8N5Y2 521 aaKnown RBP13.98□□□□□ -0.17
CAPN1-204ENST00000526468 MYLIPQ8WY64 445 aa13.98□□□□□ -0.17
CAPN1-204ENST00000526468 OSBP2Q969R2 916 aa13.98□□□□□ -0.17
CAPN1-204ENST00000526468 CEP95Q96GE4 821 aa13.98□□□□□ -0.17
CAPN1-204ENST00000526468 TTYH1Q9H313 450 aaPredicted RBP13.98□□□□□ -0.17
CAPN1-204ENST00000526468 ZNF287Q9HBT7 754 aa13.98□□□□□ -0.17
CAPN1-204ENST00000526468 RAVER2Q9HCJ3 691 aaKnown RBP13.98□□□□□ -0.17
CAPN1-204ENST00000526468 HOMER2Q9NSB8 354 aa13.98□□□□□ -0.17
CAPN1-204ENST00000526468 TMEM39AQ9NV64 488 aa13.98□□□□□ -0.17
CAPN1-204ENST00000526468 FAM184BQ9ULE4 1060 aa13.98□□□□□ -0.17
CAPN1-204ENST00000526468 SCN10AQ9Y5Y9 1956 aa13.97□□□□□ -0.17
CAPN1-204ENST00000526468 MOXD2PA6NHM9 499 aa13.97□□□□□ -0.17
CAPN1-204ENST00000526468 DCDC2CA8MYV0 355 aa13.97□□□□□ -0.17
CAPN1-204ENST00000526468 RNF113AO15541 343 aaKnown RBP13.97□□□□□ -0.17
CAPN1-204ENST00000526468 ZFYP08048 801 aaPredicted RBP13.97□□□□□ -0.17
CAPN1-204ENST00000526468 C6orf222P0C671 652 aaPredicted RBP13.97□□□□□ -0.17
CAPN1-204ENST00000526468 GNAT2P19087 354 aa13.97□□□□□ -0.17
CAPN1-204ENST00000526468 EPHB4P54760 987 aa13.97□□□□□ -0.17
CAPN1-204ENST00000526468 ANKRD35Q8N283 1001 aa13.97□□□□□ -0.17
CAPN1-204ENST00000526468 PRPF38AQ8NAV1 312 aaKnown RBP13.97□□□□□ -0.17
CAPN1-204ENST00000526468 NUP133Q8WUM0 1156 aa13.97□□□□□ -0.17
CAPN1-204ENST00000526468 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.97□□□□□ -0.17
CAPN1-204ENST00000526468 CLIP2Q9UDT6 1046 aa13.97□□□□□ -0.17
CAPN1-204ENST00000526468 RIPK3Q9Y572 518 aa13.97□□□□□ -0.17
CAPN1-204ENST00000526468 MYH7BA7E2Y1 1941 aa13.97□□□□□ -0.17
CAPN1-204ENST00000526468 MROH7Q68CQ1 1323 aa13.96□□□□□ -0.17
CAPN1-204ENST00000526468 PTPRSQ13332 1948 aa13.96□□□□□ -0.17
CAPN1-204ENST00000526468 COL4A4P53420 1690 aaPredicted RBP13.96□□□□□ -0.17
CAPN1-204ENST00000526468 DNAJC25-GNG10A0A024R161 153 aa13.96□□□□□ -0.17
CAPN1-204ENST00000526468 IGKV6D-41A0A0C4DH26 115 aa13.96□□□□□ -0.17
CAPN1-204ENST00000526468 SNAI1O95863 264 aaPredicted RBP13.96□□□□□ -0.17
CAPN1-204ENST00000526468 TTLL1O95922 423 aa13.96□□□□□ -0.17
CAPN1-204ENST00000526468 IKQ13123 557 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms