RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 TNKSO95271 1327 aa19.05■□□□□ 0.64
SSSCA1-202ENST00000526433 SLC15A5A6NIM6 579 aa19.05■□□□□ 0.64
SSSCA1-202ENST00000526433 SLC25A27O95847 323 aa19.05■□□□□ 0.64
SSSCA1-202ENST00000526433 STAT2P52630 851 aa19.05■□□□□ 0.64
SSSCA1-202ENST00000526433 CCDC96Q2M329 555 aa19.05■□□□□ 0.64
SSSCA1-202ENST00000526433 CREB3L3Q68CJ9 461 aa19.05■□□□□ 0.64
SSSCA1-202ENST00000526433 RALYLQ86SE5 291 aaKnown RBP19.05■□□□□ 0.64
SSSCA1-202ENST00000526433 RIOX2Q8IUF8 465 aa19.05■□□□□ 0.64
SSSCA1-202ENST00000526433 SOCS4Q8WXH5 440 aa19.05■□□□□ 0.64
SSSCA1-202ENST00000526433 MROH8Q9H579 483 aa19.05■□□□□ 0.64
SSSCA1-202ENST00000526433 SLC38A10Q9HBR0 1119 aa19.05■□□□□ 0.64
SSSCA1-202ENST00000526433 ZNF214Q9UL59 606 aaPredicted RBP19.05■□□□□ 0.64
SSSCA1-202ENST00000526433 IVNS1ABPQ9Y6Y0 642 aa19.05■□□□□ 0.64
SSSCA1-202ENST00000526433 ZNFX1Q9P2E3 1918 aaKnown RBP19.04■□□□□ 0.64
SSSCA1-202ENST00000526433 STRNO43815 780 aa19.04■□□□□ 0.64
SSSCA1-202ENST00000526433 MYCP01106 439 aaPredicted RBP19.04■□□□□ 0.64
SSSCA1-202ENST00000526433 FDX1P10109 184 aa19.04■□□□□ 0.64
SSSCA1-202ENST00000526433 PDHBP11177 359 aa19.04■□□□□ 0.64
SSSCA1-202ENST00000526433 SOX10P56693 466 aa19.04■□□□□ 0.64
SSSCA1-202ENST00000526433 MAP2K5Q13163 448 aa19.04■□□□□ 0.64
SSSCA1-202ENST00000526433 TTBK2Q6IQ55 1244 aa19.04■□□□□ 0.64
SSSCA1-202ENST00000526433 CPXCR1Q8N123 301 aa19.04■□□□□ 0.64
SSSCA1-202ENST00000526433 PNMA1Q8ND90 353 aa19.04■□□□□ 0.64
SSSCA1-202ENST00000526433 KAT14Q9H8E8 782 aa19.04■□□□□ 0.64
SSSCA1-202ENST00000526433 GPCPD1Q9NPB8 672 aa19.04■□□□□ 0.64
SSSCA1-202ENST00000526433 XRCC5P13010 732 aaKnown RBP19.03■□□□□ 0.64
SSSCA1-202ENST00000526433 RGS2P41220 211 aa19.03■□□□□ 0.64
SSSCA1-202ENST00000526433 SEC23AQ15436 765 aa19.03■□□□□ 0.64
SSSCA1-202ENST00000526433 RAVER2Q9HCJ3 691 aaKnown RBP19.03■□□□□ 0.64
SSSCA1-202ENST00000526433 PRR12Q9ULL5 1215 aa19.03■□□□□ 0.64
SSSCA1-202ENST00000526433 FRMPD2Q68DX3 1309 aaPredicted RBP19.02■□□□□ 0.64
SSSCA1-202ENST00000526433 CENPFP49454 3210 aa19.02■□□□□ 0.64
SSSCA1-202ENST00000526433 IFIT3O14879 490 aaKnown RBP19.02■□□□□ 0.64
SSSCA1-202ENST00000526433 ATP2A1O14983 1001 aa19.02■□□□□ 0.64
SSSCA1-202ENST00000526433 SNHG28P0DPA3 235 aa19.02■□□□□ 0.64
SSSCA1-202ENST00000526433 SLC16A2P36021 539 aa19.02■□□□□ 0.64
SSSCA1-202ENST00000526433 SLC4A3P48751 1232 aa19.02■□□□□ 0.64
SSSCA1-202ENST00000526433 UBXN2AP68543 259 aa19.02■□□□□ 0.64
SSSCA1-202ENST00000526433 ZNF543Q08ER8 600 aa19.02■□□□□ 0.64
SSSCA1-202ENST00000526433 GRB14Q14449 540 aa19.02■□□□□ 0.64
SSSCA1-202ENST00000526433 MTFR1Q15390 333 aa19.02■□□□□ 0.64
SSSCA1-202ENST00000526433 IFIT1BQ5T764 474 aaKnown RBP19.02■□□□□ 0.64
SSSCA1-202ENST00000526433 RNF20Q5VTR2 975 aa19.02■□□□□ 0.64
SSSCA1-202ENST00000526433 SNRNP48Q6IEG0 339 aaKnown RBP19.02■□□□□ 0.64
SSSCA1-202ENST00000526433 BTNL9Q6UXG8 535 aa19.02■□□□□ 0.64
SSSCA1-202ENST00000526433 CHST3Q7LGC8 479 aa19.02■□□□□ 0.64
SSSCA1-202ENST00000526433 MB21D2Q8IYB1 491 aaPredicted RBP19.02■□□□□ 0.64
SSSCA1-202ENST00000526433 TMEM106CQ9BVX2 250 aa19.02■□□□□ 0.64
SSSCA1-202ENST00000526433 TEX13BQ9BXU2 312 aa19.02■□□□□ 0.64
SSSCA1-202ENST00000526433 RIPK3Q9Y572 518 aa19.02■□□□□ 0.64
SSSCA1-202ENST00000526433 INHAP05111 366 aa19.01■□□□□ 0.63
SSSCA1-202ENST00000526433 COPB2P35606 906 aa19.01■□□□□ 0.63
SSSCA1-202ENST00000526433 OAZ1P54368 228 aa19.01■□□□□ 0.63
SSSCA1-202ENST00000526433 SNAP25P60880 206 aa19.01■□□□□ 0.63
SSSCA1-202ENST00000526433 DPP9Q86TI2 863 aa19.01■□□□□ 0.63
SSSCA1-202ENST00000526433 ERICH2A1L162 156 aa19■□□□□ 0.63
SSSCA1-202ENST00000526433 HOXC6P09630 235 aa19■□□□□ 0.63
SSSCA1-202ENST00000526433 FCER1AP12319 257 aa19■□□□□ 0.63
SSSCA1-202ENST00000526433 ADORA2AP29274 412 aa19■□□□□ 0.63
SSSCA1-202ENST00000526433 ANTXR2P58335 489 aa19■□□□□ 0.63
SSSCA1-202ENST00000526433 SYDE2Q5VT97 1194 aa19■□□□□ 0.63
SSSCA1-202ENST00000526433 TRMT44Q8IYL2 757 aaKnown RBP19■□□□□ 0.63
SSSCA1-202ENST00000526433 ABRAQ8N0Z2 381 aa19■□□□□ 0.63
SSSCA1-202ENST00000526433 TRIB2Q92519 343 aa19■□□□□ 0.63
SSSCA1-202ENST00000526433 POTEFA5A3E0 1075 aa18.99■□□□□ 0.63
SSSCA1-202ENST00000526433 COBLO75128 1261 aa18.99■□□□□ 0.63
SSSCA1-202ENST00000526433 HMGCRP04035 888 aa18.99■□□□□ 0.63
SSSCA1-202ENST00000526433 GOLGA8HP0CJ92 632 aa18.99■□□□□ 0.63
SSSCA1-202ENST00000526433 CCL5P13501 91 aa18.99■□□□□ 0.63
SSSCA1-202ENST00000526433 WTAPQ15007 396 aa18.99■□□□□ 0.63
SSSCA1-202ENST00000526433 SART3Q15020 963 aaKnown RBP18.99■□□□□ 0.63
SSSCA1-202ENST00000526433 CCL14Q16627 93 aa18.99■□□□□ 0.63
SSSCA1-202ENST00000526433 GPATCH4Q5T3I0 446 aaKnown RBP18.99■□□□□ 0.63
SSSCA1-202ENST00000526433 CCDC174Q6PII3 467 aa18.99■□□□□ 0.63
SSSCA1-202ENST00000526433 RASEFQ8IZ41 740 aa18.99■□□□□ 0.63
SSSCA1-202ENST00000526433 NPLOC4Q8TAT6 608 aa18.99■□□□□ 0.63
SSSCA1-202ENST00000526433 IGDCC4Q8TDY8 1250 aa18.99■□□□□ 0.63
SSSCA1-202ENST00000526433 AGBL1Q96MI9 1066 aa18.99■□□□□ 0.63
SSSCA1-202ENST00000526433 MMP19Q99542 508 aa18.99■□□□□ 0.63
SSSCA1-202ENST00000526433 APBA2Q99767 749 aa18.99■□□□□ 0.63
SSSCA1-202ENST00000526433 SENP2Q9HC62 589 aa18.99■□□□□ 0.63
SSSCA1-202ENST00000526433 ZNF536O15090 1300 aa18.99■□□□□ 0.63
SSSCA1-202ENST00000526433 ZKSCAN1P17029 563 aaPredicted RBP18.98■□□□□ 0.63
SSSCA1-202ENST00000526433 MCM5P33992 734 aa18.98■□□□□ 0.63
SSSCA1-202ENST00000526433 RGS19P49795 217 aa18.98■□□□□ 0.63
SSSCA1-202ENST00000526433 TRIM32Q13049 653 aa18.98■□□□□ 0.63
SSSCA1-202ENST00000526433 KCTD2Q14681 263 aa18.98■□□□□ 0.63
SSSCA1-202ENST00000526433 TSGA10IPQ3SY00 556 aa18.98■□□□□ 0.63
SSSCA1-202ENST00000526433 TMEM67Q5HYA8 995 aa18.98■□□□□ 0.63
SSSCA1-202ENST00000526433 UBA5Q9GZZ9 404 aa18.98■□□□□ 0.63
SSSCA1-202ENST00000526433 RNF208Q9H0X6 261 aa18.98■□□□□ 0.63
SSSCA1-202ENST00000526433 UNC93B1Q9H1C4 597 aa18.98■□□□□ 0.63
SSSCA1-202ENST00000526433 SMCHD1A6NHR9 2005 aa18.98■□□□□ 0.63
SSSCA1-202ENST00000526433 PRC1O43663 620 aa18.97■□□□□ 0.63
SSSCA1-202ENST00000526433 REC8O95072 547 aa18.97■□□□□ 0.63
SSSCA1-202ENST00000526433 PARP1P09874 1014 aaKnown RBP18.97■□□□□ 0.63
SSSCA1-202ENST00000526433 COL9A3Q14050 684 aaPredicted RBP18.97■□□□□ 0.63
SSSCA1-202ENST00000526433 CHST13Q8NET6 341 aa18.97■□□□□ 0.63
SSSCA1-202ENST00000526433 MTA3Q9BTC8 594 aa18.97■□□□□ 0.63
SSSCA1-202ENST00000526433 RANBP17Q9H2T7 1088 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms