RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 ARHGAP39Q9C0H5 1083 aa15.12■□□□□ 0.01
SMPD1-202ENST00000526280 CCDC69A6NI79 296 aa15.11■□□□□ 0.01
SMPD1-202ENST00000526280 CAPN15O75808 1086 aa15.11■□□□□ 0.01
SMPD1-202ENST00000526280 PARP1P09874 1014 aaKnown RBP15.11■□□□□ 0.01
SMPD1-202ENST00000526280 GOLGA8HP0CJ92 632 aa15.11■□□□□ 0.01
SMPD1-202ENST00000526280 FDX1P10109 184 aa15.11■□□□□ 0.01
SMPD1-202ENST00000526280 SLC16A2P36021 539 aa15.11■□□□□ 0.01
SMPD1-202ENST00000526280 PSMC4P43686 418 aa15.11■□□□□ 0.01
SMPD1-202ENST00000526280 IKQ13123 557 aaPredicted RBP15.11■□□□□ 0.01
SMPD1-202ENST00000526280 TMEM132BQ14DG7 1078 aa15.11■□□□□ 0.01
SMPD1-202ENST00000526280 ASPRV1Q53RT3 343 aa15.11■□□□□ 0.01
SMPD1-202ENST00000526280 NFXL1Q6ZNB6 911 aa15.11■□□□□ 0.01
SMPD1-202ENST00000526280 RUFY3Q7L099 469 aa15.11■□□□□ 0.01
SMPD1-202ENST00000526280 FBXL16Q8N461 479 aa15.11■□□□□ 0.01
SMPD1-202ENST00000526280 SLC38A10Q9HBR0 1119 aa15.11■□□□□ 0.01
SMPD1-202ENST00000526280 PRR12Q9ULL5 1215 aa15.11■□□□□ 0.01
SMPD1-202ENST00000526280 A0A0G2JMZ2 1700 aa15.11■□□□□ 0.01
SMPD1-202ENST00000526280 PALM3A6NDB9 673 aaPredicted RBP15.1■□□□□ 0.01
SMPD1-202ENST00000526280 ZBED4O75132 1171 aa15.1■□□□□ 0.01
SMPD1-202ENST00000526280 FCGRTP55899 365 aa15.1■□□□□ 0.01
SMPD1-202ENST00000526280 CCNA1P78396 465 aa15.1■□□□□ 0.01
SMPD1-202ENST00000526280 GRM4Q14833 912 aa15.1■□□□□ 0.01
SMPD1-202ENST00000526280 ARHGEF6Q15052 776 aa15.1■□□□□ 0.01
SMPD1-202ENST00000526280 SYDE2Q5VT97 1194 aa15.1■□□□□ 0.01
SMPD1-202ENST00000526280 ZNF654Q8IZM8 581 aa15.1■□□□□ 0.01
SMPD1-202ENST00000526280 TRIM47Q96LD4 638 aa15.1■□□□□ 0.01
SMPD1-202ENST00000526280 MAP3K14Q99558 947 aa15.1■□□□□ 0.01
SMPD1-202ENST00000526280 SPATC1LQ9H0A9 340 aa15.1■□□□□ 0.01
SMPD1-202ENST00000526280 MAD2L2Q9UI95 211 aa15.1■□□□□ 0.01
SMPD1-202ENST00000526280 ZNF214Q9UL59 606 aaPredicted RBP15.1■□□□□ 0.01
SMPD1-202ENST00000526280 SLC12A7Q9Y666 1083 aa15.1■□□□□ 0.01
SMPD1-202ENST00000526280 CYP46A1Q9Y6A2 500 aa15.1■□□□□ 0.01
SMPD1-202ENST00000526280 ATP2A1O14983 1001 aa15.09■□□□□ 0.01
SMPD1-202ENST00000526280 DDAH1O94760 285 aa15.09■□□□□ 0.01
SMPD1-202ENST00000526280 ECM2O94769 699 aaPredicted RBP15.09■□□□□ 0.01
SMPD1-202ENST00000526280 FMNL1O95466 1100 aaPredicted RBP15.09■□□□□ 0.01
SMPD1-202ENST00000526280 GNRH1P01148 92 aa15.09■□□□□ 0.01
SMPD1-202ENST00000526280 MAPK4P31152 587 aa15.09■□□□□ 0.01
SMPD1-202ENST00000526280 PLS1Q14651 629 aa15.09■□□□□ 0.01
SMPD1-202ENST00000526280 Q6ZUG5 572 aa15.09■□□□□ 0.01
SMPD1-202ENST00000526280 OTOP1Q7RTM1 612 aa15.09■□□□□ 0.01
SMPD1-202ENST00000526280 CTU1Q7Z7A3 348 aaKnown RBP15.09■□□□□ 0.01
SMPD1-202ENST00000526280 STAG2Q8N3U4 1231 aa15.09■□□□□ 0.01
SMPD1-202ENST00000526280 MOV10L1Q9BXT6 1211 aaKnown RBP15.09■□□□□ 0.01
SMPD1-202ENST00000526280 AGXT2Q9BYV1 514 aa15.09■□□□□ 0.01
SMPD1-202ENST00000526280 UBA5Q9GZZ9 404 aa15.09■□□□□ 0.01
SMPD1-202ENST00000526280 PORCNQ9H237 461 aa15.09■□□□□ 0.01
SMPD1-202ENST00000526280 EFCC1Q9HA90 598 aa15.09■□□□□ 0.01
SMPD1-202ENST00000526280 COL11A1P12107 1806 aaPredicted RBP15.09■□□□□ 0.01
SMPD1-202ENST00000526280 DOCK3Q8IZD9 2030 aa15.08■□□□□ 0
SMPD1-202ENST00000526280 KLRF2D3W0D1 207 aa15.08■□□□□ 0
SMPD1-202ENST00000526280 CALM1P0DP23 149 aa15.08■□□□□ 0
SMPD1-202ENST00000526280 CALM2P0DP24 149 aa15.08■□□□□ 0
SMPD1-202ENST00000526280 CALM3P0DP25 149 aa15.08■□□□□ 0
SMPD1-202ENST00000526280 STAT3P40763 770 aa15.08■□□□□ 0
SMPD1-202ENST00000526280 OAZ1P54368 228 aa15.08■□□□□ 0
SMPD1-202ENST00000526280 FGD1P98174 961 aa15.08■□□□□ 0
SMPD1-202ENST00000526280 RIOX2Q8IUF8 465 aa15.08■□□□□ 0
SMPD1-202ENST00000526280 SHCBP1Q8NEM2 672 aa15.08■□□□□ 0
SMPD1-202ENST00000526280 NUP133Q8WUM0 1156 aa15.08■□□□□ 0
SMPD1-202ENST00000526280 MYL10Q9BUA6 226 aa15.08■□□□□ 0
SMPD1-202ENST00000526280 UPF3BQ9BZI7 483 aaKnown RBP15.08■□□□□ 0
SMPD1-202ENST00000526280 RANBP17Q9H2T7 1088 aaKnown RBP15.08■□□□□ 0
SMPD1-202ENST00000526280 CPVLQ9H3G5 476 aa15.08■□□□□ 0
SMPD1-202ENST00000526280 BRPF3Q9ULD4 1205 aa15.08■□□□□ 0
SMPD1-202ENST00000526280 TRIM17Q9Y577 477 aa15.08■□□□□ 0
SMPD1-202ENST00000526280 CTDP1Q9Y5B0 961 aaPredicted RBP15.08■□□□□ 0
SMPD1-202ENST00000526280 MGAMO43451 1857 aa15.08■□□□□ 0
SMPD1-202ENST00000526280 ZSWIM8A7E2V4 1837 aa15.07■□□□□ 0
SMPD1-202ENST00000526280 TNPO2O14787 897 aaKnown RBP15.07■□□□□ 0
SMPD1-202ENST00000526280 SLC25A27O95847 323 aa15.07■□□□□ 0
SMPD1-202ENST00000526280 SNAP25P60880 206 aa15.07■□□□□ 0
SMPD1-202ENST00000526280 APOA5Q6Q788 366 aa15.07■□□□□ 0
SMPD1-202ENST00000526280 SYNE3Q6ZMZ3 975 aa15.07■□□□□ 0
SMPD1-202ENST00000526280 CCAR1Q8IX12 1150 aaKnown RBP15.07■□□□□ 0
SMPD1-202ENST00000526280 CPXCR1Q8N123 301 aa15.07■□□□□ 0
SMPD1-202ENST00000526280 BRF1Q92994 677 aa15.07■□□□□ 0
SMPD1-202ENST00000526280 COA7Q96BR5 231 aa15.07■□□□□ 0
SMPD1-202ENST00000526280 TEX13BQ9BXU2 312 aa15.07■□□□□ 0
SMPD1-202ENST00000526280 BACH2Q9BYV9 841 aa15.07■□□□□ 0
SMPD1-202ENST00000526280 C22orf23Q9BZE7 217 aa15.07■□□□□ 0
SMPD1-202ENST00000526280 RAVER2Q9HCJ3 691 aaKnown RBP15.07■□□□□ 0
SMPD1-202ENST00000526280 ZNF536O15090 1300 aa15.07■□□□□ 0
SMPD1-202ENST00000526280 KLF18A0A0U1RQI7 1052 aa15.06■□□□□ 0
SMPD1-202ENST00000526280 ERCC3P19447 782 aa15.06■□□□□ 0
SMPD1-202ENST00000526280 RXRAP19793 462 aa15.06■□□□□ 0
SMPD1-202ENST00000526280 HOXD10P28358 340 aa15.06■□□□□ 0
SMPD1-202ENST00000526280 KIF5BP33176 963 aa15.06■□□□□ 0
SMPD1-202ENST00000526280 RBM25P49756 843 aaKnown RBP15.06■□□□□ 0
SMPD1-202ENST00000526280 EVCP57679 992 aa15.06■□□□□ 0
SMPD1-202ENST00000526280 PKN2Q16513 984 aaKnown RBP15.06■□□□□ 0
SMPD1-202ENST00000526280 GPR142Q7Z601 462 aa15.06■□□□□ 0
SMPD1-202ENST00000526280 PLEKHH3Q7Z736 793 aa15.06■□□□□ 0
SMPD1-202ENST00000526280 ADGRF4Q8IZF3 695 aa15.06■□□□□ 0
SMPD1-202ENST00000526280 FANCBQ8NB91 859 aa15.06■□□□□ 0
SMPD1-202ENST00000526280 CTCFLQ8NI51 663 aaPredicted RBP15.06■□□□□ 0
SMPD1-202ENST00000526280 MROH8Q9H579 483 aa15.06■□□□□ 0
SMPD1-202ENST00000526280 UPF2Q9HAU5 1272 aaKnown RBP15.06■□□□□ 0
SMPD1-202ENST00000526280 PDRG1Q9NUG6 133 aa15.06■□□□□ 0
SMPD1-202ENST00000526280 SRRDQ9UH36 339 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms