RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 PDE4BQ07343 736 aa14.33□□□□□ -0.12
SSBP3-210ENST00000525990 SNRNP48Q6IEG0 339 aaKnown RBP14.33□□□□□ -0.12
SSBP3-210ENST00000525990 CHD1LQ86WJ1 897 aa14.33□□□□□ -0.12
SSBP3-210ENST00000525990 PLEKHM2Q8IWE5 1019 aa14.33□□□□□ -0.12
SSBP3-210ENST00000525990 ABRAQ8N0Z2 381 aa14.33□□□□□ -0.12
SSBP3-210ENST00000525990 RILPL2Q969X0 211 aa14.33□□□□□ -0.12
SSBP3-210ENST00000525990 RAVER2Q9HCJ3 691 aaKnown RBP14.33□□□□□ -0.12
SSBP3-210ENST00000525990 SUPT16HQ9Y5B9 1047 aaKnown RBP14.33□□□□□ -0.12
SSBP3-210ENST00000525990 NUCB1Q02818 461 aa14.32□□□□□ -0.12
SSBP3-210ENST00000525990 ZNF792Q3KQV3 632 aa14.32□□□□□ -0.12
SSBP3-210ENST00000525990 GJC2Q5T442 439 aaPredicted RBP14.32□□□□□ -0.12
SSBP3-210ENST00000525990 SLFN13Q68D06 897 aa14.32□□□□□ -0.12
SSBP3-210ENST00000525990 LENG1Q96BZ8 264 aaPredicted RBP14.32□□□□□ -0.12
SSBP3-210ENST00000525990 RWDD1Q9H446 243 aaPredicted RBP14.32□□□□□ -0.12
SSBP3-210ENST00000525990 ZNF287Q9HBT7 754 aa14.32□□□□□ -0.12
SSBP3-210ENST00000525990 HELLSQ9NRZ9 838 aa14.32□□□□□ -0.12
SSBP3-210ENST00000525990 ISY1Q9ULR0 285 aaKnown RBP14.32□□□□□ -0.12
SSBP3-210ENST00000525990 MTMR7Q9Y216 660 aa14.32□□□□□ -0.12
SSBP3-210ENST00000525990 RANBP2P49792 3224 aaKnown RBP14.32□□□□□ -0.12
SSBP3-210ENST00000525990 TSPY2A6NKD2 308 aa14.31□□□□□ -0.12
SSBP3-210ENST00000525990 FGAP02671 866 aa14.31□□□□□ -0.12
SSBP3-210ENST00000525990 SLC3A2P08195 630 aaKnown RBP14.31□□□□□ -0.12
SSBP3-210ENST00000525990 HSPD1P10809 573 aaKnown RBP14.31□□□□□ -0.12
SSBP3-210ENST00000525990 ATN1P54259 1190 aaPredicted RBP14.31□□□□□ -0.12
SSBP3-210ENST00000525990 SNAP25P60880 206 aa14.31□□□□□ -0.12
SSBP3-210ENST00000525990 HAND2P61296 217 aa14.31□□□□□ -0.12
SSBP3-210ENST00000525990 KCTD2Q14681 263 aa14.31□□□□□ -0.12
SSBP3-210ENST00000525990 MCMDC2Q4G0Z9 681 aa14.31□□□□□ -0.12
SSBP3-210ENST00000525990 PRPF38AQ8NAV1 312 aaKnown RBP14.31□□□□□ -0.12
SSBP3-210ENST00000525990 GMCL1P1Q8NEA9 526 aa14.31□□□□□ -0.12
SSBP3-210ENST00000525990 TEX13BQ9BXU2 312 aa14.31□□□□□ -0.12
SSBP3-210ENST00000525990 SENP6Q9GZR1 1112 aaPredicted RBP14.31□□□□□ -0.12
SSBP3-210ENST00000525990 ANAPC4Q9UJX5 808 aa14.31□□□□□ -0.12
SSBP3-210ENST00000525990 TMEM232C9JQI7 657 aa14.3□□□□□ -0.12
SSBP3-210ENST00000525990 SEPT4O43236 478 aa14.3□□□□□ -0.12
SSBP3-210ENST00000525990 RANBP6O60518 1105 aaKnown RBP14.3□□□□□ -0.12
SSBP3-210ENST00000525990 MYCNP04198 464 aaPredicted RBP14.3□□□□□ -0.12
SSBP3-210ENST00000525990 BMP3P12645 472 aa14.3□□□□□ -0.12
SSBP3-210ENST00000525990 MCCP23508 829 aa14.3□□□□□ -0.12
SSBP3-210ENST00000525990 ALX1Q15699 326 aa14.3□□□□□ -0.12
SSBP3-210ENST00000525990 RRP12Q5JTH9 1297 aaKnown RBP14.3□□□□□ -0.12
SSBP3-210ENST00000525990 KCTD1Q719H9 257 aa14.3□□□□□ -0.12
SSBP3-210ENST00000525990 SLC38A10Q9HBR0 1119 aa14.3□□□□□ -0.12
SSBP3-210ENST00000525990 HOMER2Q9NSB8 354 aa14.3□□□□□ -0.12
SSBP3-210ENST00000525990 FEM1BQ9UK73 627 aa14.3□□□□□ -0.12
SSBP3-210ENST00000525990 STX8Q9UNK0 236 aa14.3□□□□□ -0.12
SSBP3-210ENST00000525990 CCDC171Q6TFL3 1326 aa14.3□□□□□ -0.12
SSBP3-210ENST00000525990 SOX1O00570 391 aaPredicted RBP14.29□□□□□ -0.12
SSBP3-210ENST00000525990 ATP2A1O14983 1001 aa14.29□□□□□ -0.12
SSBP3-210ENST00000525990 SDSP20132 328 aa14.29□□□□□ -0.12
SSBP3-210ENST00000525990 MAGEA10P43363 369 aaPredicted RBP14.29□□□□□ -0.12
SSBP3-210ENST00000525990 AAMPQ13685 434 aa14.29□□□□□ -0.12
SSBP3-210ENST00000525990 TBC1D10CQ8IV04 446 aa14.29□□□□□ -0.12
SSBP3-210ENST00000525990 FGD4Q96M96 766 aa14.29□□□□□ -0.12
SSBP3-210ENST00000525990 GDF15Q99988 308 aa14.29□□□□□ -0.12
SSBP3-210ENST00000525990 TINF2Q9BSI4 451 aa14.29□□□□□ -0.12
SSBP3-210ENST00000525990 OSBPL3Q9H4L5 887 aa14.29□□□□□ -0.12
SSBP3-210ENST00000525990 TOMM22Q9NS69 142 aa14.29□□□□□ -0.12
SSBP3-210ENST00000525990 SLC5A4Q9NY91 659 aa14.29□□□□□ -0.12
SSBP3-210ENST00000525990 ZNF536O15090 1300 aa14.29□□□□□ -0.12
SSBP3-210ENST00000525990 SZT2Q5T011 3432 aa14.28□□□□□ -0.12
SSBP3-210ENST00000525990 DNAJC25-GNG10A0A024R161 153 aa14.28□□□□□ -0.12
SSBP3-210ENST00000525990 DNM1LO00429 736 aa14.28□□□□□ -0.12
SSBP3-210ENST00000525990 ORC4O43929 436 aa14.28□□□□□ -0.12
SSBP3-210ENST00000525990 MSCO60682 206 aa14.28□□□□□ -0.12
SSBP3-210ENST00000525990 ZBED4O75132 1171 aa14.28□□□□□ -0.12
SSBP3-210ENST00000525990 FGRP09769 529 aa14.28□□□□□ -0.12
SSBP3-210ENST00000525990 MYH6P13533 1939 aa14.28□□□□□ -0.12
SSBP3-210ENST00000525990 PDE4AP27815 886 aa14.28□□□□□ -0.12
SSBP3-210ENST00000525990 IRX5P78411 483 aaPredicted RBP14.28□□□□□ -0.12
SSBP3-210ENST00000525990 AGBL1Q96MI9 1066 aa14.28□□□□□ -0.12
SSBP3-210ENST00000525990 IL25Q9H293 177 aa14.28□□□□□ -0.12
SSBP3-210ENST00000525990 DDX49Q9Y6V7 483 aaKnown RBP14.28□□□□□ -0.12
SSBP3-210ENST00000525990 DNAH12Q6ZR08 3092 aa14.28□□□□□ -0.12
SSBP3-210ENST00000525990 ZMYM6O95789 1325 aa14.27□□□□□ -0.12
SSBP3-210ENST00000525990 NEDD4P46934 1319 aa14.27□□□□□ -0.12
SSBP3-210ENST00000525990 SNAI1O95863 264 aaPredicted RBP14.27□□□□□ -0.13
SSBP3-210ENST00000525990 PGK1P00558 417 aa14.27□□□□□ -0.13
SSBP3-210ENST00000525990 ZNF865P0CJ78 1059 aaPredicted RBP14.27□□□□□ -0.13
SSBP3-210ENST00000525990 SLC1A4P43007 532 aa14.27□□□□□ -0.13
SSBP3-210ENST00000525990 STAT2P52630 851 aa14.27□□□□□ -0.13
SSBP3-210ENST00000525990 IKQ13123 557 aaPredicted RBP14.27□□□□□ -0.13
SSBP3-210ENST00000525990 LRRC41Q15345 812 aa14.27□□□□□ -0.13
SSBP3-210ENST00000525990 TTBK2Q6IQ55 1244 aa14.27□□□□□ -0.13
SSBP3-210ENST00000525990 CWC27Q6UX04 472 aaKnown RBP14.27□□□□□ -0.13
SSBP3-210ENST00000525990 FERMT2Q96AC1 680 aa14.27□□□□□ -0.13
SSBP3-210ENST00000525990 LRCH3Q96II8 777 aa14.27□□□□□ -0.13
SSBP3-210ENST00000525990 GMCL1Q96IK5 515 aa14.27□□□□□ -0.13
SSBP3-210ENST00000525990 SYNPO2Q9UMS6 1093 aa14.27□□□□□ -0.13
SSBP3-210ENST00000525990 CTDP1Q9Y5B0 961 aaPredicted RBP14.27□□□□□ -0.13
SSBP3-210ENST00000525990 ADCY6O43306 1168 aa14.26□□□□□ -0.13
SSBP3-210ENST00000525990 COPB2P35606 906 aa14.26□□□□□ -0.13
SSBP3-210ENST00000525990 SLC16A2P36021 539 aa14.26□□□□□ -0.13
SSBP3-210ENST00000525990 ADCYAP1R1P41586 468 aa14.26□□□□□ -0.13
SSBP3-210ENST00000525990 NOVP48745 357 aa14.26□□□□□ -0.13
SSBP3-210ENST00000525990 RTP1P59025 263 aa14.26□□□□□ -0.13
SSBP3-210ENST00000525990 MDM2Q00987 491 aaPredicted RBP14.26□□□□□ -0.13
SSBP3-210ENST00000525990 CNTN2Q02246 1040 aa14.26□□□□□ -0.13
SSBP3-210ENST00000525990 CCDC174Q6PII3 467 aa14.26□□□□□ -0.13
SSBP3-210ENST00000525990 STAG1Q8WVM7 1258 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms