RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 PRR36Q9H6K5 1346 aa6.66□□□□□ -1.34
CSDE1-211ENST00000525970 CHURC1-FNTBB4DL54 471 aa6.65□□□□□ -1.34
CSDE1-211ENST00000525970 ETV2O00321 342 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-211ENST00000525970 ERVFC1P60507 584 aa6.65□□□□□ -1.34
CSDE1-211ENST00000525970 RASA3Q14644 834 aa6.65□□□□□ -1.34
CSDE1-211ENST00000525970 LRP10Q7Z4F1 713 aa6.65□□□□□ -1.34
CSDE1-211ENST00000525970 TSPYL5Q86VY4 417 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-211ENST00000525970 IRF2BP1Q8IU81 584 aa6.65□□□□□ -1.34
CSDE1-211ENST00000525970 CYB5D2Q8WUJ1 264 aa6.65□□□□□ -1.34
CSDE1-211ENST00000525970 PRKAG3Q9UGI9 489 aa6.65□□□□□ -1.34
CSDE1-211ENST00000525970 DUSP13Q9UII6 198 aa6.65□□□□□ -1.34
CSDE1-211ENST00000525970 MRVI1Q9Y6F6 885 aa6.65□□□□□ -1.34
CSDE1-211ENST00000525970 CLCQ05315 142 aa6.64□□□□□ -1.35
CSDE1-211ENST00000525970 NR0B2Q15466 257 aa6.64□□□□□ -1.35
CSDE1-211ENST00000525970 PHACTR4Q8IZ21 702 aa6.64□□□□□ -1.35
CSDE1-211ENST00000525970 OXR1Q8N573 874 aa6.64□□□□□ -1.35
CSDE1-211ENST00000525970 DTWD2Q8NBA8 298 aa6.64□□□□□ -1.35
CSDE1-211ENST00000525970 PPP1R13LQ8WUF5 828 aa6.64□□□□□ -1.35
CSDE1-211ENST00000525970 HNRNPLLQ8WVV9 542 aaKnown RBP6.64□□□□□ -1.35
CSDE1-211ENST00000525970 KCNN1Q92952 543 aa6.64□□□□□ -1.35
CSDE1-211ENST00000525970 RNPC3Q96LT9 517 aaKnown RBP6.64□□□□□ -1.35
CSDE1-211ENST00000525970 SRRTQ9BXP5 876 aaKnown RBP6.64□□□□□ -1.35
CSDE1-211ENST00000525970 SLC6A17Q9H1V8 727 aa6.64□□□□□ -1.35
CSDE1-211ENST00000525970 SMG5Q9UPR3 1016 aaKnown RBP6.64□□□□□ -1.35
CSDE1-211ENST00000525970 MSRB2Q9Y3D2 182 aa6.64□□□□□ -1.35
CSDE1-211ENST00000525970 FITM1A5D6W6 292 aa6.63□□□□□ -1.35
CSDE1-211ENST00000525970 ZGLP1P0C6A0 271 aa6.63□□□□□ -1.35
CSDE1-211ENST00000525970 EGR3Q06889 387 aa6.63□□□□□ -1.35
CSDE1-211ENST00000525970 REXO1Q8N1G1 1221 aaKnown RBP6.63□□□□□ -1.35
CSDE1-211ENST00000525970 GPATCH3Q96I76 525 aa6.63□□□□□ -1.35
CSDE1-211ENST00000525970 RNF32Q9H0A6 362 aa6.63□□□□□ -1.35
CSDE1-211ENST00000525970 EHMT1Q9H9B1 1298 aa6.63□□□□□ -1.35
CSDE1-211ENST00000525970 SP110Q9HB58 689 aa6.63□□□□□ -1.35
CSDE1-211ENST00000525970 SNTG2Q9NY99 539 aa6.63□□□□□ -1.35
CSDE1-211ENST00000525970 NCANO14594 1321 aa6.62□□□□□ -1.35
CSDE1-211ENST00000525970 FAM221BA6H8Z2 402 aa6.62□□□□□ -1.35
CSDE1-211ENST00000525970 SLC22A31A6NKX4 558 aa6.62□□□□□ -1.35
CSDE1-211ENST00000525970 WASH4PA8MWX3 477 aa6.62□□□□□ -1.35
CSDE1-211ENST00000525970 DNAJA2O60884 412 aa6.62□□□□□ -1.35
CSDE1-211ENST00000525970 ATE1O95260 518 aa6.62□□□□□ -1.35
CSDE1-211ENST00000525970 RAG1P15918 1043 aa6.62□□□□□ -1.35
CSDE1-211ENST00000525970 LINC00310P59036 64 aa6.62□□□□□ -1.35
CSDE1-211ENST00000525970 CHMP4BP1P59074 171 aa6.62□□□□□ -1.35
CSDE1-211ENST00000525970 FBXW10Q5XX13 1052 aa6.62□□□□□ -1.35
CSDE1-211ENST00000525970 SLFN12Q8IYM2 578 aa6.62□□□□□ -1.35
CSDE1-211ENST00000525970 FAM169BQ8N8A8 192 aa6.62□□□□□ -1.35
CSDE1-211ENST00000525970 RNF141Q8WVD5 230 aa6.62□□□□□ -1.35
CSDE1-211ENST00000525970 SYTL4Q96C24 671 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-211ENST00000525970 CCDC74BQ96LY2 380 aa6.62□□□□□ -1.35
CSDE1-211ENST00000525970 KRTAP4-11Q9BYQ6 195 aa6.62□□□□□ -1.35
CSDE1-211ENST00000525970 KCNK12Q9HB15 430 aa6.62□□□□□ -1.35
CSDE1-211ENST00000525970 CWC22Q9HCG8 908 aaKnown RBP6.62□□□□□ -1.35
CSDE1-211ENST00000525970 PRRG2O14669 202 aa6.61□□□□□ -1.35
CSDE1-211ENST00000525970 PEX10O60683 326 aa6.61□□□□□ -1.35
CSDE1-211ENST00000525970 GBP1P32455 592 aa6.61□□□□□ -1.35
CSDE1-211ENST00000525970 TRHRP34981 398 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-211ENST00000525970 GIPRP48546 466 aa6.61□□□□□ -1.35
CSDE1-211ENST00000525970 SNX17Q15036 470 aa6.61□□□□□ -1.35
CSDE1-211ENST00000525970 ARSHQ5FYA8 562 aa6.61□□□□□ -1.35
CSDE1-211ENST00000525970 DEPDC7Q96QD5 511 aa6.61□□□□□ -1.35
CSDE1-211ENST00000525970 FERD3LQ96RJ6 166 aa6.61□□□□□ -1.35
CSDE1-211ENST00000525970 KIF2CQ99661 725 aa6.61□□□□□ -1.35
CSDE1-211ENST00000525970 GMIPQ9P107 970 aa6.61□□□□□ -1.35
CSDE1-211ENST00000525970 SMAD7O15105 426 aaKnown RBP6.6□□□□□ -1.35
CSDE1-211ENST00000525970 NUAK1O60285 661 aa6.6□□□□□ -1.35
CSDE1-211ENST00000525970 SEMA7AO75326 666 aa6.6□□□□□ -1.35
CSDE1-211ENST00000525970 LTKP29376 864 aa6.6□□□□□ -1.35
CSDE1-211ENST00000525970 CHRNEQ04844 493 aa6.6□□□□□ -1.35
CSDE1-211ENST00000525970 LRRFIP1Q32MZ4 808 aaKnown RBP6.6□□□□□ -1.35
CSDE1-211ENST00000525970 PLEKHG4Q58EX7 1191 aa6.6□□□□□ -1.35
CSDE1-211ENST00000525970 TNNI3KQ59H18 835 aa6.6□□□□□ -1.35
CSDE1-211ENST00000525970 SPPL2CQ8IUH8 684 aa6.6□□□□□ -1.35
CSDE1-211ENST00000525970 BAHD1Q8TBE0 780 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-211ENST00000525970 ANAPC16Q96DE5 110 aa6.6□□□□□ -1.35
CSDE1-211ENST00000525970 SRPK1Q96SB4 655 aaKnown RBP6.6□□□□□ -1.35
CSDE1-211ENST00000525970 TRIM55Q9BYV6 548 aa6.6□□□□□ -1.35
CSDE1-211ENST00000525970 BRINP2Q9C0B6 783 aa6.6□□□□□ -1.35
CSDE1-211ENST00000525970 CCDC113Q9H0I3 377 aa6.6□□□□□ -1.35
CSDE1-211ENST00000525970 ANTXR1Q9H6X2 564 aa6.6□□□□□ -1.35
CSDE1-211ENST00000525970 PPT2Q9UMR5 302 aa6.6□□□□□ -1.35
CSDE1-211ENST00000525970 B8ZZF3 427 aa6.59□□□□□ -1.35
CSDE1-211ENST00000525970 RBAK-RBAKDNI3L0D1 243 aa6.59□□□□□ -1.35
CSDE1-211ENST00000525970 DUSP4Q13115 394 aa6.59□□□□□ -1.35
CSDE1-211ENST00000525970 OVOS1Q6IE37 1185 aa6.59□□□□□ -1.35
CSDE1-211ENST00000525970 CCDC81Q6ZN84 652 aa6.59□□□□□ -1.35
CSDE1-211ENST00000525970 CELF2-AS1Q8N7Q2 184 aa6.59□□□□□ -1.35
CSDE1-211ENST00000525970 RBBP8NLQ8NC74 664 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-211ENST00000525970 CPLX3Q8WVH0 158 aa6.59□□□□□ -1.35
CSDE1-211ENST00000525970 ASPNQ9BXN1 380 aa6.59□□□□□ -1.35
CSDE1-211ENST00000525970 ZNRF3Q9ULT6 936 aa6.59□□□□□ -1.35
CSDE1-211ENST00000525970 YBX2Q9Y2T7 364 aaKnown RBP6.59□□□□□ -1.35
CSDE1-211ENST00000525970 PCDHA11Q9Y5I1 949 aa6.59□□□□□ -1.35
CSDE1-211ENST00000525970 INHBBP09529 407 aa6.58□□□□□ -1.36
CSDE1-211ENST00000525970 NLRC3Q7RTR2 1065 aa6.58□□□□□ -1.36
CSDE1-211ENST00000525970 ANKS4BQ8N8V4 417 aa6.58□□□□□ -1.36
CSDE1-211ENST00000525970 ATG4CQ96DT6 458 aa6.58□□□□□ -1.36
CSDE1-211ENST00000525970 INTS4Q96HW7 963 aaKnown RBP6.58□□□□□ -1.36
CSDE1-211ENST00000525970 MCOLN1Q9GZU1 580 aa6.58□□□□□ -1.36
CSDE1-211ENST00000525970 C19orf44Q9H6X5 657 aa6.58□□□□□ -1.36
CSDE1-211ENST00000525970 RGS13O14921 159 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms