RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 UBE3CQ15386 1083 aa11.48□□□□□ -0.57
TRAPPC4-206ENST00000525303 C20orf194Q5TEA3 1177 aa11.48□□□□□ -0.57
TRAPPC4-206ENST00000525303 CTR9Q6PD62 1173 aa11.48□□□□□ -0.57
TRAPPC4-206ENST00000525303 REPS2Q8NFH8 660 aa11.48□□□□□ -0.57
TRAPPC4-206ENST00000525303 MYLIPQ8WY64 445 aa11.48□□□□□ -0.57
TRAPPC4-206ENST00000525303 PUS7LQ9H0K6 701 aaKnown RBP11.48□□□□□ -0.57
TRAPPC4-206ENST00000525303 ZBTB40Q9NUA8 1239 aa11.48□□□□□ -0.57
TRAPPC4-206ENST00000525303 DIS3Q9Y2L1 958 aaKnown RBP11.48□□□□□ -0.57
TRAPPC4-206ENST00000525303 LCTP09848 1927 aa11.47□□□□□ -0.57
TRAPPC4-206ENST00000525303 KIAA0355O15063 1070 aa11.47□□□□□ -0.57
TRAPPC4-206ENST00000525303 ADAMTS4O75173 837 aa11.47□□□□□ -0.57
TRAPPC4-206ENST00000525303 AKR1A1P14550 325 aa11.47□□□□□ -0.57
TRAPPC4-206ENST00000525303 RAG1P15918 1043 aa11.47□□□□□ -0.57
TRAPPC4-206ENST00000525303 COPB2P35606 906 aa11.47□□□□□ -0.57
TRAPPC4-206ENST00000525303 EPHB4P54760 987 aa11.47□□□□□ -0.57
TRAPPC4-206ENST00000525303 ZSCAN25Q6NSZ9 544 aa11.47□□□□□ -0.57
TRAPPC4-206ENST00000525303 STK11IPQ8N1F8 1099 aa11.47□□□□□ -0.57
TRAPPC4-206ENST00000525303 RNPC3Q96LT9 517 aaKnown RBP11.47□□□□□ -0.57
TRAPPC4-206ENST00000525303 NUP88Q99567 741 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC4-206ENST00000525303 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.47□□□□□ -0.57
TRAPPC4-206ENST00000525303 ARPP21Q9UBL0 812 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC4-206ENST00000525303 CNPY2Q9Y2B0 182 aa11.47□□□□□ -0.57
TRAPPC4-206ENST00000525303 MUC3AQ02505 3323 aa11.47□□□□□ -0.57
TRAPPC4-206ENST00000525303 LRRC37A2A6NM11 1700 aa11.46□□□□□ -0.57
TRAPPC4-206ENST00000525303 TTC28Q96AY4 2481 aa11.46□□□□□ -0.57
TRAPPC4-206ENST00000525303 SYNRGQ9UMZ2 1314 aa11.46□□□□□ -0.57
TRAPPC4-206ENST00000525303 NEFLP07196 543 aa11.46□□□□□ -0.57
TRAPPC4-206ENST00000525303 ACLYP53396 1101 aa11.46□□□□□ -0.57
TRAPPC4-206ENST00000525303 FPGSQ05932 587 aa11.46□□□□□ -0.57
TRAPPC4-206ENST00000525303 SNRNP48Q6IEG0 339 aaKnown RBP11.46□□□□□ -0.57
TRAPPC4-206ENST00000525303 DDX11Q96FC9 970 aa11.46□□□□□ -0.57
TRAPPC4-206ENST00000525303 SLF1Q9BQI6 1058 aa11.46□□□□□ -0.57
TRAPPC4-206ENST00000525303 TEX13BQ9BXU2 312 aa11.46□□□□□ -0.57
TRAPPC4-206ENST00000525303 STARD7Q9NQZ5 370 aa11.46□□□□□ -0.57
TRAPPC4-206ENST00000525303 TMEM39AQ9NV64 488 aa11.46□□□□□ -0.57
TRAPPC4-206ENST00000525303 SYNGAP1Q96PV0 1343 aa11.45□□□□□ -0.58
TRAPPC4-206ENST00000525303 F5H6K3 240 aa11.45□□□□□ -0.58
TRAPPC4-206ENST00000525303 SMARCA5O60264 1052 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC4-206ENST00000525303 SNAI1O95863 264 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC4-206ENST00000525303 FOSL2P15408 326 aa11.45□□□□□ -0.58
TRAPPC4-206ENST00000525303 RASA1P20936 1047 aa11.45□□□□□ -0.58
TRAPPC4-206ENST00000525303 SLC4A3P48751 1232 aa11.45□□□□□ -0.58
TRAPPC4-206ENST00000525303 KLRC3Q07444 240 aa11.45□□□□□ -0.58
TRAPPC4-206ENST00000525303 FAAP100Q0VG06 881 aa11.45□□□□□ -0.58
TRAPPC4-206ENST00000525303 TOX2Q96NM4 488 aa11.45□□□□□ -0.58
TRAPPC4-206ENST00000525303 STRBPQ96SI9 672 aaKnown RBP11.45□□□□□ -0.58
TRAPPC4-206ENST00000525303 CRBNQ96SW2 442 aa11.45□□□□□ -0.58
TRAPPC4-206ENST00000525303 TSEN34Q9BSV6 310 aaKnown RBP11.45□□□□□ -0.58
TRAPPC4-206ENST00000525303 LRRCC1Q9C099 1032 aa11.45□□□□□ -0.58
TRAPPC4-206ENST00000525303 MKNK2Q9HBH9 465 aa11.45□□□□□ -0.58
TRAPPC4-206ENST00000525303 ZHX1Q9UKY1 873 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC4-206ENST00000525303 FAM184BQ9ULE4 1060 aa11.45□□□□□ -0.58
TRAPPC4-206ENST00000525303 RIPK3Q9Y572 518 aa11.45□□□□□ -0.58
TRAPPC4-206ENST00000525303 DNAJC25-GNG10A0A024R161 153 aa11.44□□□□□ -0.58
TRAPPC4-206ENST00000525303 TMEM265A0A087WTH1 108 aa11.44□□□□□ -0.58
TRAPPC4-206ENST00000525303 MYADML2A6NDP7 307 aa11.44□□□□□ -0.58
TRAPPC4-206ENST00000525303 MOXD2PA6NHM9 499 aa11.44□□□□□ -0.58
TRAPPC4-206ENST00000525303 GSG1L2A8MUP6 293 aa11.44□□□□□ -0.58
TRAPPC4-206ENST00000525303 DCDC2CA8MYV0 355 aa11.44□□□□□ -0.58
TRAPPC4-206ENST00000525303 MINDY4BA8MYZ0 360 aa11.44□□□□□ -0.58
TRAPPC4-206ENST00000525303 NDUFB10O96000 172 aa11.44□□□□□ -0.58
TRAPPC4-206ENST00000525303 KCNA10Q16322 511 aa11.44□□□□□ -0.58
TRAPPC4-206ENST00000525303 SBK1Q52WX2 424 aa11.44□□□□□ -0.58
TRAPPC4-206ENST00000525303 MAMDC4Q6UXC1 1216 aa11.44□□□□□ -0.58
TRAPPC4-206ENST00000525303 ANKRD33Q7Z3H0 272 aa11.44□□□□□ -0.58
TRAPPC4-206ENST00000525303 CPXCR1Q8N123 301 aa11.44□□□□□ -0.58
TRAPPC4-206ENST00000525303 MSL3Q8N5Y2 521 aaKnown RBP11.44□□□□□ -0.58
TRAPPC4-206ENST00000525303 PRPF38AQ8NAV1 312 aaKnown RBP11.44□□□□□ -0.58
TRAPPC4-206ENST00000525303 KLHDC9Q8NEP7 349 aa11.44□□□□□ -0.58
TRAPPC4-206ENST00000525303 NUP133Q8WUM0 1156 aa11.44□□□□□ -0.58
TRAPPC4-206ENST00000525303 NYAP2Q9P242 653 aa11.44□□□□□ -0.58
TRAPPC4-206ENST00000525303 NCOR1O75376 2440 aa11.44□□□□□ -0.58
TRAPPC4-206ENST00000525303 ZBED4O75132 1171 aa11.43□□□□□ -0.58
TRAPPC4-206ENST00000525303 DUSP11O75319 330 aaKnown RBP11.43□□□□□ -0.58
TRAPPC4-206ENST00000525303 IRX5P78411 483 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC4-206ENST00000525303 ACVR2BQ13705 512 aa11.43□□□□□ -0.58
TRAPPC4-206ENST00000525303 CCSAPQ6IQ19 270 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC4-206ENST00000525303 KIFC2Q96AC6 838 aa11.43□□□□□ -0.58
TRAPPC4-206ENST00000525303 RAVER2Q9HCJ3 691 aaKnown RBP11.43□□□□□ -0.58
TRAPPC4-206ENST00000525303 CLIP2Q9UDT6 1046 aa11.43□□□□□ -0.58
TRAPPC4-206ENST00000525303 CTDP1Q9Y5B0 961 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC4-206ENST00000525303 CHD9Q3L8U1 2897 aa11.43□□□□□ -0.58
TRAPPC4-206ENST00000525303 SCN5AQ14524 2016 aa11.43□□□□□ -0.58
TRAPPC4-206ENST00000525303 TCF20Q9UGU0 1960 aaKnown RBP11.43□□□□□ -0.58
TRAPPC4-206ENST00000525303 MROH7Q68CQ1 1323 aa11.42□□□□□ -0.58
TRAPPC4-206ENST00000525303 IGKV6D-41A0A0C4DH26 115 aa11.42□□□□□ -0.58
TRAPPC4-206ENST00000525303 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-206ENST00000525303 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-206ENST00000525303 ATP2A1O14983 1001 aa11.42□□□□□ -0.58
TRAPPC4-206ENST00000525303 ADCY6O43306 1168 aa11.42□□□□□ -0.58
TRAPPC4-206ENST00000525303 TIMP1P01033 207 aa11.42□□□□□ -0.58
TRAPPC4-206ENST00000525303 C6orf222P0C671 652 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-206ENST00000525303 DNAJB2P25686 324 aa11.42□□□□□ -0.58
TRAPPC4-206ENST00000525303 GRIN2CQ14957 1233 aa11.42□□□□□ -0.58
TRAPPC4-206ENST00000525303 GIMAP6Q6P9H5 292 aa11.42□□□□□ -0.58
TRAPPC4-206ENST00000525303 ZNF467Q7Z7K2 595 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-206ENST00000525303 ANKRD35Q8N283 1001 aa11.42□□□□□ -0.58
TRAPPC4-206ENST00000525303 KBTBD3Q8NAB2 608 aa11.42□□□□□ -0.58
TRAPPC4-206ENST00000525303 OSBP2Q969R2 916 aa11.42□□□□□ -0.58
TRAPPC4-206ENST00000525303 FGD4Q96M96 766 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms