RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 GJD2Q9UKL4 321 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 TPCN1Q9ULQ1 816 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 CEP131Q9UPN4 1083 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 FNDC3AQ9Y2H6 1198 aaKnown RBP5.31□□□□□ -1.56
CD44-213ENST00000525209 TMX2Q9Y320 296 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 SYNRGQ9UMZ2 1314 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 GTPBP10A4D1E9 387 aaKnown RBP5.3□□□□□ -1.56
CD44-213ENST00000525209 H3BM21 787 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 FZD9O00144 591 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 MAN1A2O60476 641 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 GNRH1P01148 92 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 LTFP02788 710 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 IFIT1P09914 478 aaKnown RBP5.3□□□□□ -1.56
CD44-213ENST00000525209 UBA7P41226 1012 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 RAD52P43351 418 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 RECQLP46063 649 aaPredicted RBP5.3□□□□□ -1.56
CD44-213ENST00000525209 TM4SF4P48230 202 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 NEK4P51957 841 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 USP14P54578 494 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 RPS26P62854 115 aaKnown RBP5.3□□□□□ -1.56
CD44-213ENST00000525209 NCAPHQ15003 741 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 INAVAQ3KP66 663 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 PPP1R26Q5T8A7 1209 aaPredicted RBP5.3□□□□□ -1.56
CD44-213ENST00000525209 AGAP9Q5VTM2 703 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 IQCEQ6IPM2 695 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 TTBK2Q6IQ55 1244 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 GALNT5Q7Z7M9 940 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 TBC1D1Q86TI0 1168 aaPredicted RBP5.3□□□□□ -1.56
CD44-213ENST00000525209 FAM26EQ8N5C1 309 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 ZDHHC1Q8WTX9 485 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 NUP133Q8WUM0 1156 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 SGCZQ96LD1 299 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 CDC6Q99741 560 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 PHACTR1Q9C0D0 580 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 EHD4Q9H223 541 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 CHRDQ9H2X0 955 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 ELP3Q9H9T3 547 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 C1orf112Q9NSG2 853 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 ARHGAP28Q9P2N2 729 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 TMCC3Q9ULS5 477 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 BCS1LQ9Y276 419 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 ZNF652Q9Y2D9 606 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 PARP3Q9Y6F1 533 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 SLC4A7Q9Y6M7 1214 aa5.3□□□□□ -1.56
CD44-213ENST00000525209 TRBV23-1A0A0A0MS06 115 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 hCG_1642624A0A1W2PR95 340 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 TOR1BO14657 336 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 EREGO14944 169 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 SUSD5O60279 629 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 PLOD3O60568 738 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 PRKD3O94806 890 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 UPP2O95045 317 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 MYBL2P10244 700 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 PYGMP11217 842 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 RHCEP18577 417 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 ID4P47928 161 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 TDO2P48775 406 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 MMP14P50281 582 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 MPP1Q00013 466 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 RHDQ02161 417 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 G3BP1Q13283 466 aaKnown RBP eCLIP5.29□□□□□ -1.56
CD44-213ENST00000525209 PRR16Q569H4 304 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 INTS6LQ5JSJ4 861 aaKnown RBP5.29□□□□□ -1.56
CD44-213ENST00000525209 SLC10A5Q5PT55 438 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 VPS53Q5VIR6 699 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 SPATA1Q5VX52 437 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 LMBRD2Q68DH5 695 aaPredicted RBP5.29□□□□□ -1.56
CD44-213ENST00000525209 FAAH2Q6GMR7 532 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 RETSATQ6NUM9 610 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 SWSAP1Q6NVH7 229 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 TPTE2Q6XPS3 522 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 REC114Q7Z4M0 266 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 ZBTB10Q96DT7 871 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 LRGUKQ96M69 825 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 IPO9Q96P70 1041 aaKnown RBP5.29□□□□□ -1.56
CD44-213ENST00000525209 NUP88Q99567 741 aaPredicted RBP5.29□□□□□ -1.56
CD44-213ENST00000525209 CRB3Q9BUF7 120 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 CEP44Q9C0F1 390 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 PRKRIP1Q9H875 184 aaPredicted RBP5.29□□□□□ -1.56
CD44-213ENST00000525209 EHMT1Q9H9B1 1298 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 RSAD1Q9HA92 442 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 AGO4Q9HCK5 861 aaKnown RBP5.29□□□□□ -1.56
CD44-213ENST00000525209 CRTAC1Q9NQ79 661 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 LRRC4BQ9NT99 713 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 SMC4Q9NTJ3 1288 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 RRN3Q9NYV6 651 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 TMEM63CQ9P1W3 806 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.29□□□□□ -1.56
CD44-213ENST00000525209 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.29□□□□□ -1.56
CD44-213ENST00000525209 DNMT3LQ9UJW3 386 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 ZNF232Q9UNY5 417 aa5.29□□□□□ -1.56
CD44-213ENST00000525209 APOBEC2Q9Y235 224 aaKnown RBP5.29□□□□□ -1.56
CD44-213ENST00000525209 A0A1W2PP55 124 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 GOLGA6L6A8MZA4 724 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 FAM155AB1AL88 458 aaPredicted RBP5.28□□□□□ -1.56
CD44-213ENST00000525209 M0R3H8 397 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 CILPO75339 1184 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 ARIH2O95376 493 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 PYGLP06737 847 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 RPS6KB1P23443 525 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms