RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 EAF2Q96CJ1 260 aaPredicted RBP10.18□□□□□ -0.78
DEPDC1-205ENST00000525124 USB1Q9BQ65 265 aaKnown RBP10.18□□□□□ -0.78
DEPDC1-205ENST00000525124 TXNRD2Q9NNW7 524 aa10.18□□□□□ -0.78
DEPDC1-205ENST00000525124 ATP13A2Q9NQ11 1180 aa10.18□□□□□ -0.78
DEPDC1-205ENST00000525124 SERPINB13Q9UIV8 391 aa10.18□□□□□ -0.78
DEPDC1-205ENST00000525124 RABGAP1Q9Y3P9 1069 aa10.18□□□□□ -0.78
DEPDC1-205ENST00000525124 GREB1LQ9C091 1923 aaPredicted RBP10.17□□□□□ -0.78
DEPDC1-205ENST00000525124 COL6A3P12111 3177 aa10.17□□□□□ -0.78
DEPDC1-205ENST00000525124 USP17L15C9J2P7 530 aa10.17□□□□□ -0.78
DEPDC1-205ENST00000525124 USP17L13C9JLJ4 530 aa10.17□□□□□ -0.78
DEPDC1-205ENST00000525124 USP17L11C9JVI0 530 aa10.17□□□□□ -0.78
DEPDC1-205ENST00000525124 USP17L18D6R9N7 530 aa10.17□□□□□ -0.78
DEPDC1-205ENST00000525124 USP17L22D6RA61 530 aa10.17□□□□□ -0.78
DEPDC1-205ENST00000525124 USP17L17D6RBQ6 530 aa10.17□□□□□ -0.78
DEPDC1-205ENST00000525124 USP17L19D6RCP7 530 aa10.17□□□□□ -0.78
DEPDC1-205ENST00000525124 USP17L20D6RJB6 530 aa10.17□□□□□ -0.78
DEPDC1-205ENST00000525124 RGS2P41220 211 aa10.17□□□□□ -0.78
DEPDC1-205ENST00000525124 DYNLL1P63167 89 aaKnown RBP10.17□□□□□ -0.78
DEPDC1-205ENST00000525124 USP17L24Q0WX57 530 aa10.17□□□□□ -0.78
DEPDC1-205ENST00000525124 MAP3K12Q12852 859 aa10.17□□□□□ -0.78
DEPDC1-205ENST00000525124 PDE3AQ14432 1141 aa10.17□□□□□ -0.78
DEPDC1-205ENST00000525124 CEP85Q6P2H3 762 aa10.17□□□□□ -0.78
DEPDC1-205ENST00000525124 GPR142Q7Z601 462 aa10.17□□□□□ -0.78
DEPDC1-205ENST00000525124 FTSJ3Q8IY81 847 aaKnown RBP10.17□□□□□ -0.78
DEPDC1-205ENST00000525124 DIS3LQ8TF46 1054 aaKnown RBP10.17□□□□□ -0.78
DEPDC1-205ENST00000525124 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.17□□□□□ -0.78
DEPDC1-205ENST00000525124 KIAA1683Q9H0B3 1180 aa10.17□□□□□ -0.78
DEPDC1-205ENST00000525124 CCDC8Q9H0W5 538 aaPredicted RBP10.17□□□□□ -0.78
DEPDC1-205ENST00000525124 C11orf49Q9H6J7 331 aa10.17□□□□□ -0.78
DEPDC1-205ENST00000525124 TLR7Q9NYK1 1049 aaKnown RBP10.17□□□□□ -0.78
DEPDC1-205ENST00000525124 LAMA3Q16787 3333 aa10.16□□□□□ -0.78
DEPDC1-205ENST00000525124 IDH1O75874 414 aaKnown RBP10.16□□□□□ -0.78
DEPDC1-205ENST00000525124 GH2P01242 217 aa10.16□□□□□ -0.78
DEPDC1-205ENST00000525124 COL6A1P12109 1028 aa10.16□□□□□ -0.78
DEPDC1-205ENST00000525124 RLBP1P12271 317 aa10.16□□□□□ -0.78
DEPDC1-205ENST00000525124 SNRPBP14678 240 aaKnown RBP10.16□□□□□ -0.78
DEPDC1-205ENST00000525124 ZKSCAN1P17029 563 aaPredicted RBP10.16□□□□□ -0.78
DEPDC1-205ENST00000525124 CYP2B6P20813 491 aa10.16□□□□□ -0.78
DEPDC1-205ENST00000525124 USP5P45974 858 aa10.16□□□□□ -0.78
DEPDC1-205ENST00000525124 CCNA1P78396 465 aa10.16□□□□□ -0.78
DEPDC1-205ENST00000525124 GABPAQ06546 454 aa10.16□□□□□ -0.78
DEPDC1-205ENST00000525124 CACNB2Q08289 660 aaPredicted RBP10.16□□□□□ -0.78
DEPDC1-205ENST00000525124 TTF1Q15361 905 aaPredicted RBP10.16□□□□□ -0.78
DEPDC1-205ENST00000525124 SHROOM1Q2M3G4 852 aaPredicted RBP10.16□□□□□ -0.78
DEPDC1-205ENST00000525124 CERKLQ49MI3 558 aaPredicted RBP10.16□□□□□ -0.78
DEPDC1-205ENST00000525124 HSP90AB4PQ58FF6 505 aa10.16□□□□□ -0.78
DEPDC1-205ENST00000525124 CATSPERGQ6ZRH7 1159 aa10.16□□□□□ -0.78
DEPDC1-205ENST00000525124 PLEKHH3Q7Z736 793 aa10.16□□□□□ -0.78
DEPDC1-205ENST00000525124 ITPRIPQ8IWB1 547 aa10.16□□□□□ -0.78
DEPDC1-205ENST00000525124 MAGEB6Q8N7X4 407 aa10.16□□□□□ -0.78
DEPDC1-205ENST00000525124 APBA2Q99767 749 aa10.16□□□□□ -0.78
DEPDC1-205ENST00000525124 RIOK1Q9BRS2 568 aaKnown RBP10.16□□□□□ -0.78
DEPDC1-205ENST00000525124 PORCNQ9H237 461 aa10.16□□□□□ -0.78
DEPDC1-205ENST00000525124 MYH4Q9Y623 1939 aa10.15□□□□□ -0.78
DEPDC1-205ENST00000525124 PFASO15067 1338 aa10.15□□□□□ -0.78
DEPDC1-205ENST00000525124 CNMDO75829 334 aa10.15□□□□□ -0.78
DEPDC1-205ENST00000525124 GLRX3O76003 335 aaKnown RBP10.15□□□□□ -0.78
DEPDC1-205ENST00000525124 HOXC6P09630 235 aa10.15□□□□□ -0.78
DEPDC1-205ENST00000525124 MAP2K5Q13163 448 aa10.15□□□□□ -0.78
DEPDC1-205ENST00000525124 LRIT3Q3SXY7 679 aa10.15□□□□□ -0.78
DEPDC1-205ENST00000525124 LCE2CQ5TA81 110 aa10.15□□□□□ -0.78
DEPDC1-205ENST00000525124 HPS1Q92902 700 aa10.15□□□□□ -0.78
DEPDC1-205ENST00000525124 C1orf115Q9H7X2 142 aa10.15□□□□□ -0.78
DEPDC1-205ENST00000525124 CABP5Q9NP86 173 aa10.15□□□□□ -0.78
DEPDC1-205ENST00000525124 STAP2Q9UGK3 403 aa10.15□□□□□ -0.78
DEPDC1-205ENST00000525124 SAP30BPQ9UHR5 308 aaKnown RBP10.15□□□□□ -0.78
DEPDC1-205ENST00000525124 SMCHD1A6NHR9 2005 aa10.15□□□□□ -0.78
DEPDC1-205ENST00000525124 SLC15A5A6NIM6 579 aa10.14□□□□□ -0.79
DEPDC1-205ENST00000525124 MSCO60682 206 aa10.14□□□□□ -0.79
DEPDC1-205ENST00000525124 IGHA2P01877 340 aa10.14□□□□□ -0.79
DEPDC1-205ENST00000525124 MS4A1P11836 297 aa10.14□□□□□ -0.79
DEPDC1-205ENST00000525124 VCAM1P19320 739 aa10.14□□□□□ -0.79
DEPDC1-205ENST00000525124 SHMT1P34896 483 aa10.14□□□□□ -0.79
DEPDC1-205ENST00000525124 SKOR1P84550 965 aa10.14□□□□□ -0.79
DEPDC1-205ENST00000525124 ABCB5Q2M3G0 1257 aa10.14□□□□□ -0.79
DEPDC1-205ENST00000525124 CCAR1Q8IX12 1150 aaKnown RBP10.14□□□□□ -0.79
DEPDC1-205ENST00000525124 C7orf61Q8IZ16 206 aa10.14□□□□□ -0.79
DEPDC1-205ENST00000525124 MIGA1Q8NAN2 632 aa10.14□□□□□ -0.79
DEPDC1-205ENST00000525124 EDC3Q96F86 508 aaKnown RBP10.14□□□□□ -0.79
DEPDC1-205ENST00000525124 PAGR1Q9BTK6 254 aa10.14□□□□□ -0.79
DEPDC1-205ENST00000525124 ANTXR1Q9H6X2 564 aa10.14□□□□□ -0.79
DEPDC1-205ENST00000525124 MAGEB6P1A0A0J9YX57 407 aa10.13□□□□□ -0.79
DEPDC1-205ENST00000525124 SOX1O00570 391 aaPredicted RBP10.13□□□□□ -0.79
DEPDC1-205ENST00000525124 WIPF1O43516 503 aa10.13□□□□□ -0.79
DEPDC1-205ENST00000525124 GUCY1A2P33402 732 aa10.13□□□□□ -0.79
DEPDC1-205ENST00000525124 PLCD1P51178 756 aa10.13□□□□□ -0.79
DEPDC1-205ENST00000525124 GRB14Q14449 540 aa10.13□□□□□ -0.79
DEPDC1-205ENST00000525124 AACSQ86V21 672 aa10.13□□□□□ -0.79
DEPDC1-205ENST00000525124 RPAP2Q8IXW5 612 aaPredicted RBP10.13□□□□□ -0.79
DEPDC1-205ENST00000525124 RHPN1Q8TCX5 695 aa10.13□□□□□ -0.79
DEPDC1-205ENST00000525124 FEZ1Q99689 392 aa10.13□□□□□ -0.79
DEPDC1-205ENST00000525124 CRNKL1Q9BZJ0 848 aaKnown RBP10.13□□□□□ -0.79
DEPDC1-205ENST00000525124 EXOC6BQ9Y2D4 811 aa10.13□□□□□ -0.79
DEPDC1-205ENST00000525124 ZBED9Q6R2W3 1325 aa10.12□□□□□ -0.79
DEPDC1-205ENST00000525124 TCRBV5S4A2TA0A5A2 114 aa10.12□□□□□ -0.79
DEPDC1-205ENST00000525124 STRNO43815 780 aa10.12□□□□□ -0.79
DEPDC1-205ENST00000525124 PEX10O60683 326 aa10.12□□□□□ -0.79
DEPDC1-205ENST00000525124 CCND3P30281 292 aaPredicted RBP10.12□□□□□ -0.79
DEPDC1-205ENST00000525124 HNRNPUQ00839 825 aaKnown RBP eCLIP10.12□□□□□ -0.79
DEPDC1-205ENST00000525124 MDM2Q00987 491 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms