RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 KIF2CQ99661 725 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 SLF1Q9BQI6 1058 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 MOV10L1Q9BXT6 1211 aaKnown RBP5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 BACH2Q9BYV9 841 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 C22orf23Q9BZE7 217 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 NCOA5Q9HCD5 579 aaKnown RBP5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 CWC22Q9HCG8 908 aaKnown RBP5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 ZSWIM6Q9HCJ5 1215 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 PDRG1Q9NUG6 133 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 SAGE1Q9NXZ1 904 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 HOXC10Q9NYD6 342 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 MAD2L2Q9UI95 211 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 FEM1BQ9UK73 627 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 PNMA3Q9UL41 463 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 PPP1R9AQ9ULJ8 1098 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 PRR12Q9ULL5 1215 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 RIPK3Q9Y572 518 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 TRIM17Q9Y577 477 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 CTDP1Q9Y5B0 961 aaPredicted RBP5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 SLC12A7Q9Y666 1083 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 CYP46A1Q9Y6A2 500 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 DDX49Q9Y6V7 483 aaKnown RBP5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 ZSWIM8A7E2V4 1837 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 GREB1LQ9C091 1923 aaPredicted RBP5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 GOLGA8AA7E2F4 631 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 GOLGA8BA8MQT2 603 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 TNPO2O14787 897 aaKnown RBP5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 ZBED4O75132 1171 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 LARGE1O95461 756 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 PGK2P07205 417 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 PARP1P09874 1014 aaKnown RBP5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 SNHG28P0DPA3 235 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 ALAS1P13196 640 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 ERCC3P19447 782 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 CYP2B6P20813 491 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 PSMA5P28066 241 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 CDC27P30260 824 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 ADD1P35611 737 aaKnown RBP5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 AK2P54819 239 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 ERVK-9P63128 1117 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 ERVK-24P63145 666 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 PRKCZQ05513 592 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 TROAPQ12815 778 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 GRM4Q14833 912 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 CDC37Q16543 378 aaPredicted RBP5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 CCDC178Q5BJE1 867 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 MUM1L1Q5H9M0 696 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 SNRNP48Q6IEG0 339 aaKnown RBP5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 APOA5Q6Q788 366 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 LBX2Q6XYB7 198 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 CCAR1Q8IX12 1150 aaKnown RBP5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 SRBD1Q8N5C6 995 aaKnown RBP5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 NECAB1Q8N987 351 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 PRPF38AQ8NAV1 312 aaKnown RBP5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 REPS2Q8NFH8 660 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 GPRC5AQ8NFJ5 357 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 DCAF4Q8WV16 495 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 TMEM87BQ96K49 555 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 PURBQ96QR8 312 aaKnown RBP5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 PIGSQ96S52 555 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 SPATC1LQ9H0A9 340 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 JMJD4Q9H9V9 463 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 ZCCHC17Q9NP64 241 aaKnown RBP5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 MORF4L1Q9UBU8 362 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 SLC45A1Q9Y2W3 748 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 RABGAP1Q9Y3P9 1069 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 LAMA4Q16363 1823 aa5.37□□□□□ -1.55
CHMP4A-202ENST00000524955 PALM3A6NDB9 673 aaPredicted RBP5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 NFIBO00712 420 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 ZBTB43O43298 467 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 CYTH3O43739 400 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 PPP1R11O60927 126 aaPredicted RBP5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 CD2BP2O95400 341 aaKnown RBP5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 HMGB1P09429 215 aaKnown RBP5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 ELNP15502 786 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 PDIA3P30101 505 aaKnown RBP5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 STAT3P40763 770 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 LIFRP42702 1097 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 GCLCP48506 637 aaPredicted RBP5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 FLT3LGP49771 235 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 FOSBP53539 338 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 TRIM32Q13049 653 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 KIF22Q14807 665 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 CCL14Q16627 93 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 FAM110CQ1W6H9 321 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 QRICH1Q2TAL8 776 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 PPP4R3BQ5MIZ7 849 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 NSMFQ6X4W1 530 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 SYNE3Q6ZMZ3 975 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 OTOP1Q7RTM1 612 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 GPR142Q7Z601 462 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 FAM160B2Q86V87 743 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 CTCFLQ8NI51 663 aaPredicted RBP5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 SH3TC2Q8TF17 1288 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 CHURC1Q8WUH1 139 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 TBC1D5Q92609 795 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 PHKBQ93100 1093 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 COA7Q96BR5 231 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 ERO1AQ96HE7 468 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 CFHR5Q9BXR6 569 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms